RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 HDGFL1Q5TGJ6 251 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 COPS6Q7L5N1 327 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 ZNF34Q8IZ26 560 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 SLAIN1Q8ND83 568 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 XAGE3Q8WTP9 111 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 RRAGCQ9HB90 399 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 MBIPQ9NS73 344 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 CHPF2Q9P2E5 772 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 LTBP3Q9NS15 1303 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 COL4A1P02462 1669 aa8.47□□□□□ -1.05
UBXN4-205ENST00000467065 COL4A5P29400 1685 aa8.47□□□□□ -1.05
UBXN4-205ENST00000467065 TOMM70O94826 608 aa8.47□□□□□ -1.05
UBXN4-205ENST00000467065 CCDC93Q567U6 631 aa8.47□□□□□ -1.05
UBXN4-205ENST00000467065 SOGA3Q5TF21 947 aa8.47□□□□□ -1.05
UBXN4-205ENST00000467065 C3orf67Q6ZVT6 689 aa8.47□□□□□ -1.05
UBXN4-205ENST00000467065 SLC51AQ86UW1 340 aa8.47□□□□□ -1.05
UBXN4-205ENST00000467065 WWC1Q8IX03 1113 aa8.47□□□□□ -1.05
UBXN4-205ENST00000467065 C16orf71Q8IYS4 520 aaPredicted RBP8.47□□□□□ -1.05
UBXN4-205ENST00000467065 ZNF428Q96B54 188 aa8.47□□□□□ -1.05
UBXN4-205ENST00000467065 CFAP44Q96MT7 982 aa8.47□□□□□ -1.05
UBXN4-205ENST00000467065 DDX21Q9NR30 783 aaKnown RBP eCLIP8.47□□□□□ -1.05
UBXN4-205ENST00000467065 SNED1Q8TER0 1413 aa8.46□□□□□ -1.05
UBXN4-205ENST00000467065 GLTPD2A6NH11 291 aa8.46□□□□□ -1.06
UBXN4-205ENST00000467065 ZNF853P0CG23 659 aa8.46□□□□□ -1.06
UBXN4-205ENST00000467065 CRY2Q49AN0 593 aa8.46□□□□□ -1.06
UBXN4-205ENST00000467065 PARP10Q53GL7 1025 aa8.46□□□□□ -1.06
UBXN4-205ENST00000467065 DUSP27Q5VZP5 1158 aa8.46□□□□□ -1.06
UBXN4-205ENST00000467065 PPP1R42Q7Z4L9 355 aa8.46□□□□□ -1.06
UBXN4-205ENST00000467065 C7orf43Q8WVR3 580 aa8.46□□□□□ -1.06
UBXN4-205ENST00000467065 RPGRQ92834 1020 aaKnown RBP8.46□□□□□ -1.06
UBXN4-205ENST00000467065 IFT57Q9NWB7 429 aa8.46□□□□□ -1.06
UBXN4-205ENST00000467065 ELL2O00472 640 aaPredicted RBP8.45□□□□□ -1.06
UBXN4-205ENST00000467065 HOXB7P09629 217 aa8.45□□□□□ -1.06
UBXN4-205ENST00000467065 ALDH1B1P30837 517 aa8.45□□□□□ -1.06
UBXN4-205ENST00000467065 IRX5P78411 483 aaPredicted RBP8.45□□□□□ -1.06
UBXN4-205ENST00000467065 FKBP4Q02790 459 aaKnown RBP eCLIP8.45□□□□□ -1.06
UBXN4-205ENST00000467065 HSP90AB3PQ58FF7 597 aa8.45□□□□□ -1.06
UBXN4-205ENST00000467065 NLRP10Q86W26 655 aa8.45□□□□□ -1.06
UBXN4-205ENST00000467065 SYNE4Q8N205 404 aa8.45□□□□□ -1.06
UBXN4-205ENST00000467065 PLCD3Q8N3E9 789 aa8.45□□□□□ -1.06
UBXN4-205ENST00000467065 RBM46Q8TBY0 533 aaKnown RBP8.45□□□□□ -1.06
UBXN4-205ENST00000467065 UTP14AQ9BVJ6 771 aaKnown RBP8.45□□□□□ -1.06
UBXN4-205ENST00000467065 TMEM106CQ9BVX2 250 aa8.45□□□□□ -1.06
UBXN4-205ENST00000467065 STK31Q9BXU1 1019 aa8.45□□□□□ -1.06
UBXN4-205ENST00000467065 ZNF277Q9NRM2 450 aaPredicted RBP8.45□□□□□ -1.06
UBXN4-205ENST00000467065 IL16Q14005 1332 aa8.45□□□□□ -1.06
UBXN4-205ENST00000467065 LTBP1Q14766 1721 aa8.45□□□□□ -1.06
UBXN4-205ENST00000467065 ADAMTSL1Q8N6G6 1762 aa8.44□□□□□ -1.06
UBXN4-205ENST00000467065 TCERG1O14776 1098 aaKnown RBP8.44□□□□□ -1.06
UBXN4-205ENST00000467065 DDNO94850 711 aaPredicted RBP8.44□□□□□ -1.06
UBXN4-205ENST00000467065 VEGFAP15692 232 aaPredicted RBP8.44□□□□□ -1.06
UBXN4-205ENST00000467065 TCIRG1Q13488 830 aa8.44□□□□□ -1.06
UBXN4-205ENST00000467065 PLBD2Q8NHP8 589 aa8.44□□□□□ -1.06
UBXN4-205ENST00000467065 DBF4Q9UBU7 674 aaPredicted RBP8.44□□□□□ -1.06
UBXN4-205ENST00000467065 ZNF541Q9H0D2 1346 aa8.44□□□□□ -1.06
UBXN4-205ENST00000467065 DUOX1Q9NRD9 1551 aa8.44□□□□□ -1.06
UBXN4-205ENST00000467065 PCNTO95613 3336 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 POTECB2RU33 542 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 ATP5J2-PTCD1G3V325 749 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 PPEF1O14829 653 aaPredicted RBP8.43□□□□□ -1.06
UBXN4-205ENST00000467065 HCLS1P14317 486 aaPredicted RBP8.43□□□□□ -1.06
UBXN4-205ENST00000467065 HOXA10P31260 410 aaPredicted RBP8.43□□□□□ -1.06
UBXN4-205ENST00000467065 IARSP41252 1262 aaKnown RBP8.43□□□□□ -1.06
UBXN4-205ENST00000467065 HTRA3P83110 453 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 DPY19L2Q6NUT2 758 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 RTKN2Q8IZC4 609 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.43□□□□□ -1.06
UBXN4-205ENST00000467065 C8orf58Q8NAV2 365 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 TSR2Q969E8 191 aaKnown RBP8.43□□□□□ -1.06
UBXN4-205ENST00000467065 RBM17Q96I25 401 aaKnown RBP8.43□□□□□ -1.06
UBXN4-205ENST00000467065 NLRP3Q96P20 1036 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 CRAMP1Q96RY5 1269 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 PHAXQ9H814 394 aaKnown RBP8.43□□□□□ -1.06
UBXN4-205ENST00000467065 TRMT112Q9UI30 125 aaKnown RBP8.43□□□□□ -1.06
UBXN4-205ENST00000467065 ABCC4O15439 1325 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 RNF123Q5XPI4 1314 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 ZBED9Q6R2W3 1325 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 TRPM7Q96QT4 1865 aa8.43□□□□□ -1.06
UBXN4-205ENST00000467065 PLCG2P16885 1265 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 APLP1P51693 650 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 FSTL1Q12841 308 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 SLC10A5Q5PT55 438 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 ANKRD13DQ6ZTN6 518 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 TSPYL6Q8N831 410 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 SMC1BQ8NDV3 1235 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 HYPKQ9NX55 129 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 ZBTB47Q9UFB7 747 aaPredicted RBP8.42□□□□□ -1.06
UBXN4-205ENST00000467065 SH3TC1Q8TE82 1336 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 A0A1B0GUL6 1792 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 PSME4Q14997 1843 aa8.42□□□□□ -1.06
UBXN4-205ENST00000467065 IPO8O15397 1037 aaKnown RBP8.41□□□□□ -1.06
UBXN4-205ENST00000467065 CT47B1P0C2W7 299 aaPredicted RBP8.41□□□□□ -1.06
UBXN4-205ENST00000467065 RTL5Q5HYW3 569 aaPredicted RBP8.41□□□□□ -1.06
UBXN4-205ENST00000467065 CCDC30Q5VVM6 783 aa8.41□□□□□ -1.06
UBXN4-205ENST00000467065 FAM89AQ96GI7 184 aa8.41□□□□□ -1.06
UBXN4-205ENST00000467065 PSMD1Q99460 953 aa8.41□□□□□ -1.06
UBXN4-205ENST00000467065 ISCA1Q9BUE6 129 aa8.41□□□□□ -1.06
UBXN4-205ENST00000467065 SCN9AQ15858 1988 aa8.41□□□□□ -1.06
UBXN4-205ENST00000467065 MS4A1P11836 297 aa8.4□□□□□ -1.06
UBXN4-205ENST00000467065 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms