RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 C1orf115Q9H7X2 142 aa16.61■□□□□ 0.25
PDCD11-202ENST00000466959 PDE8AO60658 829 aa16.6■□□□□ 0.25
PDCD11-202ENST00000466959 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
PDCD11-202ENST00000466959 ERICH6BQ5W0A0 696 aa16.6■□□□□ 0.25
PDCD11-202ENST00000466959 CD2APQ9Y5K6 639 aa16.6■□□□□ 0.25
PDCD11-202ENST00000466959 KIF13BQ9NQT8 1826 aa16.6■□□□□ 0.25
PDCD11-202ENST00000466959 FOXO4P98177 505 aa16.59■□□□□ 0.25
PDCD11-202ENST00000466959 EPHA10Q5JZY3 1008 aa16.59■□□□□ 0.25
PDCD11-202ENST00000466959 BICC1Q9H694 974 aaKnown RBP16.59■□□□□ 0.25
PDCD11-202ENST00000466959 CTSWP56202 376 aa16.58■□□□□ 0.24
PDCD11-202ENST00000466959 RABL6Q3YEC7 729 aaPredicted RBP16.58■□□□□ 0.24
PDCD11-202ENST00000466959 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
PDCD11-202ENST00000466959 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
PDCD11-202ENST00000466959 C10orf71Q711Q0 1435 aa16.58■□□□□ 0.24
PDCD11-202ENST00000466959 MTX1Q13505 466 aa16.57■□□□□ 0.24
PDCD11-202ENST00000466959 CEP85Q6P2H3 762 aa16.57■□□□□ 0.24
PDCD11-202ENST00000466959 BRIP1Q9BX63 1249 aa16.57■□□□□ 0.24
PDCD11-202ENST00000466959 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
PDCD11-202ENST00000466959 CSF1RP07333 972 aa16.56■□□□□ 0.24
PDCD11-202ENST00000466959 APLP1P51693 650 aa16.56■□□□□ 0.24
PDCD11-202ENST00000466959 LMBR1LQ6UX01 489 aa16.56■□□□□ 0.24
PDCD11-202ENST00000466959 RPAP2Q8IXW5 612 aaPredicted RBP16.56■□□□□ 0.24
PDCD11-202ENST00000466959 TTLL11Q8NHH1 800 aa16.56■□□□□ 0.24
PDCD11-202ENST00000466959 NLRP3Q96P20 1036 aa16.56■□□□□ 0.24
PDCD11-202ENST00000466959 PCDHB15Q9Y5E8 787 aa16.56■□□□□ 0.24
PDCD11-202ENST00000466959 RTL9Q8NET4 1388 aa16.55■□□□□ 0.24
PDCD11-202ENST00000466959 ATP8B2P98198 1209 aa16.55■□□□□ 0.24
PDCD11-202ENST00000466959 SF3B3Q15393 1217 aaKnown RBP16.55■□□□□ 0.24
PDCD11-202ENST00000466959 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
PDCD11-202ENST00000466959 DLEC1Q9Y238 1755 aa16.54■□□□□ 0.24
PDCD11-202ENST00000466959 KLRG2A4D1S0 409 aaPredicted RBP16.54■□□□□ 0.24
PDCD11-202ENST00000466959 CCDC152Q4G0S7 254 aa16.54■□□□□ 0.24
PDCD11-202ENST00000466959 KIAA1551Q9HCM1 1747 aa16.53■□□□□ 0.24
PDCD11-202ENST00000466959 PNMA6EA0A0J9YXQ4 647 aa16.53■□□□□ 0.24
PDCD11-202ENST00000466959 PDE6BP35913 854 aa16.53■□□□□ 0.24
PDCD11-202ENST00000466959 FAM161AQ3B820 660 aa16.53■□□□□ 0.24
PDCD11-202ENST00000466959 CRY2Q49AN0 593 aa16.53■□□□□ 0.24
PDCD11-202ENST00000466959 SIRT2Q8IXJ6 389 aa16.53■□□□□ 0.24
PDCD11-202ENST00000466959 CHMP3Q9Y3E7 222 aa16.53■□□□□ 0.24
PDCD11-202ENST00000466959 SPEF2Q9C093 1822 aa16.53■□□□□ 0.24
PDCD11-202ENST00000466959 SRGAP3O43295 1099 aa16.52■□□□□ 0.24
PDCD11-202ENST00000466959 HMMRO75330 724 aa16.52■□□□□ 0.24
PDCD11-202ENST00000466959 POLA2Q14181 598 aa16.52■□□□□ 0.24
PDCD11-202ENST00000466959 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
PDCD11-202ENST00000466959 CCDC85AQ96PX6 553 aaPredicted RBP16.52■□□□□ 0.24
PDCD11-202ENST00000466959 GREM2Q9H772 168 aa16.52■□□□□ 0.24
PDCD11-202ENST00000466959 PDZRN3Q9UPQ7 1066 aa16.52■□□□□ 0.24
PDCD11-202ENST00000466959 TAF1P21675 1872 aa16.52■□□□□ 0.23
PDCD11-202ENST00000466959 IFIT5Q13325 482 aaKnown RBP16.51■□□□□ 0.23
PDCD11-202ENST00000466959 ANKRD18BA2A2Z9 1011 aa16.5■□□□□ 0.23
PDCD11-202ENST00000466959 ITGA6P23229 1130 aa16.5■□□□□ 0.23
PDCD11-202ENST00000466959 RFX5P48382 616 aaPredicted RBP16.5■□□□□ 0.23
PDCD11-202ENST00000466959 HDAC1Q13547 482 aaPredicted RBP16.5■□□□□ 0.23
PDCD11-202ENST00000466959 CCDC57Q2TAC2 916 aa16.5■□□□□ 0.23
PDCD11-202ENST00000466959 RPGRQ92834 1020 aaKnown RBP16.5■□□□□ 0.23
PDCD11-202ENST00000466959 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
PDCD11-202ENST00000466959 CACNA1SQ13698 1873 aa16.5■□□□□ 0.23
PDCD11-202ENST00000466959 COL4A1P02462 1669 aa16.5■□□□□ 0.23
PDCD11-202ENST00000466959 SRGNP10124 158 aa16.49■□□□□ 0.23
PDCD11-202ENST00000466959 HOXA10P31260 410 aaPredicted RBP16.49■□□□□ 0.23
PDCD11-202ENST00000466959 DDX46Q7L014 1031 aaKnown RBP16.49■□□□□ 0.23
PDCD11-202ENST00000466959 C2CD5Q86YS7 1000 aa16.49■□□□□ 0.23
PDCD11-202ENST00000466959 RWDD1Q9H446 243 aaPredicted RBP16.49■□□□□ 0.23
PDCD11-202ENST00000466959 H0YIN7 160 aa16.48■□□□□ 0.23
PDCD11-202ENST00000466959 KIF3CO14782 793 aa16.48■□□□□ 0.23
PDCD11-202ENST00000466959 NPR1P16066 1061 aa16.48■□□□□ 0.23
PDCD11-202ENST00000466959 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
PDCD11-202ENST00000466959 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
PDCD11-202ENST00000466959 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
PDCD11-202ENST00000466959 CDC5LQ99459 802 aaKnown RBP16.48■□□□□ 0.23
PDCD11-202ENST00000466959 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
PDCD11-202ENST00000466959 SEC31BQ9NQW1 1179 aa16.48■□□□□ 0.23
PDCD11-202ENST00000466959 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
PDCD11-202ENST00000466959 GTF3C3Q9Y5Q9 886 aa16.48■□□□□ 0.23
PDCD11-202ENST00000466959 TGFB2P61812 414 aa16.47■□□□□ 0.23
PDCD11-202ENST00000466959 TAF7LQ5H9L4 462 aa16.47■□□□□ 0.23
PDCD11-202ENST00000466959 STYK1Q6J9G0 422 aa16.47■□□□□ 0.23
PDCD11-202ENST00000466959 MASTLQ96GX5 879 aa16.47■□□□□ 0.23
PDCD11-202ENST00000466959 BRCA1P38398 1863 aaKnown RBP16.47■□□□□ 0.23
PDCD11-202ENST00000466959 A0A1B0GUL6 1792 aa16.46■□□□□ 0.23
PDCD11-202ENST00000466959 LRRC37AA6NMS7 1700 aa16.46■□□□□ 0.23
PDCD11-202ENST00000466959 TOMM70O94826 608 aa16.46■□□□□ 0.23
PDCD11-202ENST00000466959 CHRNA5P30532 468 aa16.46■□□□□ 0.23
PDCD11-202ENST00000466959 GRAPQ13588 217 aa16.46■□□□□ 0.23
PDCD11-202ENST00000466959 ANKRD18AQ8IVF6 992 aa16.46■□□□□ 0.23
PDCD11-202ENST00000466959 KLHDC4Q8TBB5 520 aa16.46■□□□□ 0.23
PDCD11-202ENST00000466959 GRAPLQ8TC17 118 aaPredicted RBP16.46■□□□□ 0.23
PDCD11-202ENST00000466959 ZNF594Q96JF6 807 aaPredicted RBP16.46■□□□□ 0.23
PDCD11-202ENST00000466959 CCDC136Q96JN2 1154 aa16.46■□□□□ 0.23
PDCD11-202ENST00000466959 PA2G4Q9UQ80 394 aaKnown RBP16.46■□□□□ 0.23
PDCD11-202ENST00000466959 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.23
PDCD11-202ENST00000466959 IGHDP01880 384 aa16.45■□□□□ 0.22
PDCD11-202ENST00000466959 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
PDCD11-202ENST00000466959 CELF1Q92879 486 aaKnown RBP16.45■□□□□ 0.22
PDCD11-202ENST00000466959 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
PDCD11-202ENST00000466959 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
PDCD11-202ENST00000466959 SURF6O75683 361 aaKnown RBP16.44■□□□□ 0.22
PDCD11-202ENST00000466959 CIAO1O76071 339 aa16.44■□□□□ 0.22
PDCD11-202ENST00000466959 DPEP1P16444 411 aa16.44■□□□□ 0.22
PDCD11-202ENST00000466959 ALDH1B1P30837 517 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms