RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 PLVAPQ9BX97 442 aa8.25□□□□□ -1.09
LRCH3-212ENST00000466845 LRFN2Q9ULH4 789 aa8.25□□□□□ -1.09
LRCH3-212ENST00000466845 M0R082 166 aa8.24□□□□□ -1.09
LRCH3-212ENST00000466845 LILRB5O75023 590 aa8.24□□□□□ -1.09
LRCH3-212ENST00000466845 SPATA31C1P0DKV0 1188 aa8.24□□□□□ -1.09
LRCH3-212ENST00000466845 TREML1Q86YW5 311 aa8.24□□□□□ -1.09
LRCH3-212ENST00000466845 ZNF417Q8TAU3 575 aa8.24□□□□□ -1.09
LRCH3-212ENST00000466845 ZNF587Q96SQ5 575 aaPredicted RBP8.24□□□□□ -1.09
LRCH3-212ENST00000466845 POLR3GLQ9BT43 218 aa8.24□□□□□ -1.09
LRCH3-212ENST00000466845 SUV39H2Q9H5I1 410 aa8.24□□□□□ -1.09
LRCH3-212ENST00000466845 KRBA1A5PL33 1030 aa8.23□□□□□ -1.09
LRCH3-212ENST00000466845 ARID3CA6NKF2 412 aa8.23□□□□□ -1.09
LRCH3-212ENST00000466845 OPLAHO14841 1288 aa8.23□□□□□ -1.09
LRCH3-212ENST00000466845 NFKB1P19838 968 aa8.23□□□□□ -1.09
LRCH3-212ENST00000466845 C20orf204Q6ZNR8 217 aa8.23□□□□□ -1.09
LRCH3-212ENST00000466845 RAB44Q7Z6P3 723 aaPredicted RBP8.23□□□□□ -1.09
LRCH3-212ENST00000466845 SLC6A14Q9UN76 642 aa8.23□□□□□ -1.09
LRCH3-212ENST00000466845 RTCBQ9Y3I0 505 aaKnown RBP8.23□□□□□ -1.09
LRCH3-212ENST00000466845 STARD13Q9Y3M8 1113 aa8.23□□□□□ -1.09
LRCH3-212ENST00000466845 ABTB2Q8N961 1025 aa8.22□□□□□ -1.09
LRCH3-212ENST00000466845 TRPM4Q8TD43 1214 aa8.22□□□□□ -1.09
LRCH3-212ENST00000466845 TRIM11Q96F44 468 aa8.22□□□□□ -1.09
LRCH3-212ENST00000466845 DNAJB12Q9NXW2 375 aaKnown RBP8.22□□□□□ -1.09
LRCH3-212ENST00000466845 FRRS1LQ9P0K9 344 aa8.22□□□□□ -1.09
LRCH3-212ENST00000466845 TRIM28Q13263 835 aaKnown RBP8.21□□□□□ -1.1
LRCH3-212ENST00000466845 CCDC82Q8N4S0 544 aa8.21□□□□□ -1.1
LRCH3-212ENST00000466845 PIK3R5Q8WYR1 880 aa8.21□□□□□ -1.1
LRCH3-212ENST00000466845 TTC9Q92623 222 aa8.21□□□□□ -1.1
LRCH3-212ENST00000466845 NACC1Q96RE7 527 aa8.21□□□□□ -1.1
LRCH3-212ENST00000466845 SPOCK3Q9BQ16 436 aa8.21□□□□□ -1.1
LRCH3-212ENST00000466845 FNDC3AQ9Y2H6 1198 aaKnown RBP8.21□□□□□ -1.1
LRCH3-212ENST00000466845 ALBP02768 609 aa8.2□□□□□ -1.1
LRCH3-212ENST00000466845 RARAP10276 462 aa8.2□□□□□ -1.1
LRCH3-212ENST00000466845 ATP2B4P23634 1241 aa8.2□□□□□ -1.1
LRCH3-212ENST00000466845 NRLP54845 237 aa8.2□□□□□ -1.1
LRCH3-212ENST00000466845 DHX32Q7L7V1 743 aaKnown RBP8.2□□□□□ -1.1
LRCH3-212ENST00000466845 ARID3AQ99856 593 aa8.2□□□□□ -1.1
LRCH3-212ENST00000466845 IGFLR1Q9H665 355 aa8.2□□□□□ -1.1
LRCH3-212ENST00000466845 STIM2Q9P246 746 aa8.2□□□□□ -1.1
LRCH3-212ENST00000466845 XYLBO75191 536 aa8.19□□□□□ -1.1
LRCH3-212ENST00000466845 RGS9O75916 674 aaPredicted RBP8.19□□□□□ -1.1
LRCH3-212ENST00000466845 RPLP1P05386 114 aaKnown RBP8.19□□□□□ -1.1
LRCH3-212ENST00000466845 GRNP28799 593 aaKnown RBP8.19□□□□□ -1.1
LRCH3-212ENST00000466845 GPLD1P80108 840 aa8.19□□□□□ -1.1
LRCH3-212ENST00000466845 TBC1D8BQ0IIM8 1120 aa8.19□□□□□ -1.1
LRCH3-212ENST00000466845 CMTR1Q8N1G2 835 aaKnown RBP8.19□□□□□ -1.1
LRCH3-212ENST00000466845 TLR7Q9NYK1 1049 aaKnown RBP8.19□□□□□ -1.1
LRCH3-212ENST00000466845 APBA3O96018 575 aa8.18□□□□□ -1.1
LRCH3-212ENST00000466845 ITGB2P05107 769 aa8.18□□□□□ -1.1
LRCH3-212ENST00000466845 PSAPP07602 524 aa8.18□□□□□ -1.1
LRCH3-212ENST00000466845 HOXD8P13378 290 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-212ENST00000466845 NID1P14543 1247 aa8.18□□□□□ -1.1
LRCH3-212ENST00000466845 TARSP26639 723 aaKnown RBP8.18□□□□□ -1.1
LRCH3-212ENST00000466845 SOX18P35713 384 aa8.18□□□□□ -1.1
LRCH3-212ENST00000466845 COL9A3Q14050 684 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-212ENST00000466845 SAP130Q9H0E3 1048 aa8.18□□□□□ -1.1
LRCH3-212ENST00000466845 MTMR7Q9Y216 660 aa8.18□□□□□ -1.1
LRCH3-212ENST00000466845 SASH3O75995 380 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 PROCP04070 461 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 PLAURQ03405 335 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 ZNF326Q5BKZ1 582 aaKnown RBP8.17□□□□□ -1.1
LRCH3-212ENST00000466845 TRAPPC3LQ5T215 181 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 PSAPL1Q6NUJ1 521 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 FAM35AQ86V20 835 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 NLRP13Q86W25 1043 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 ETFBKMTQ8IXQ9 262 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 RGL4Q8IZJ4 473 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 CACTIN-AS1Q8N1I8 211 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 JPH1Q9HDC5 661 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-212ENST00000466845 ZFATQ9P243 1243 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 KCNMB2Q9Y691 235 aa8.17□□□□□ -1.1
LRCH3-212ENST00000466845 C1QTNF9BB2RNN3 333 aa8.16□□□□□ -1.1
LRCH3-212ENST00000466845 TNFRSF10BO14763 440 aa8.16□□□□□ -1.1
LRCH3-212ENST00000466845 RAC1P63000 192 aa8.16□□□□□ -1.1
LRCH3-212ENST00000466845 DTWD1Q8N5C7 304 aa8.16□□□□□ -1.1
LRCH3-212ENST00000466845 RB1CC1Q8TDY2 1594 aa8.16□□□□□ -1.1
LRCH3-212ENST00000466845 MKNK1Q9BUB5 465 aa8.16□□□□□ -1.1
LRCH3-212ENST00000466845 RBSNQ9H1K0 784 aa8.16□□□□□ -1.1
LRCH3-212ENST00000466845 C1orf115Q9H7X2 142 aa8.16□□□□□ -1.1
LRCH3-212ENST00000466845 NAA30Q147X3 362 aaPredicted RBP8.15□□□□□ -1.1
LRCH3-212ENST00000466845 ELMSAN1Q6PJG2 1045 aa8.15□□□□□ -1.1
LRCH3-212ENST00000466845 KRT25Q7Z3Z0 450 aa8.15□□□□□ -1.1
LRCH3-212ENST00000466845 CD163Q86VB7 1156 aa8.15□□□□□ -1.1
LRCH3-212ENST00000466845 TICAM2Q86XR7 235 aa8.15□□□□□ -1.1
LRCH3-212ENST00000466845 C9orf172C9J069 976 aa8.14□□□□□ -1.11
LRCH3-212ENST00000466845 SSFA2P28290 1259 aa8.14□□□□□ -1.11
LRCH3-212ENST00000466845 ZAP70P43403 619 aa8.14□□□□□ -1.11
LRCH3-212ENST00000466845 AFF1P51825 1210 aaKnown RBP8.14□□□□□ -1.11
LRCH3-212ENST00000466845 LOC102724428A0A0B4J2F2 783 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 TMEM88BA6NKF7 163 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 ZBTB42B2RXF5 422 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 UBAP1LF5GYI3 381 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 ELNP15502 786 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 PCSK2P16519 638 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 SIK1P57059 783 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 B4GALNT3Q6L9W6 998 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 ALKBH2Q6NS38 261 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 ILDR2Q71H61 639 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 HELQQ8TDG4 1101 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 DCAF11Q8TEB1 546 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms