RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 SALL2Q9Y467 1007 aaPredicted RBP8.82□□□□□ -1
TPM3-214ENST00000466010 PCDHB9Q9Y5E1 797 aa8.82□□□□□ -1
TPM3-214ENST00000466010 KIF24Q5T7B8 1368 aa8.82□□□□□ -1
TPM3-214ENST00000466010 TNS1Q9HBL0 1735 aaKnown RBP8.82□□□□□ -1
TPM3-214ENST00000466010 LRRC37A3O60309 1634 aa8.81□□□□□ -1
TPM3-214ENST00000466010 PLSCR1O15162 318 aa8.81□□□□□ -1
TPM3-214ENST00000466010 IL2RBP14784 551 aa8.81□□□□□ -1
TPM3-214ENST00000466010 ZNF16P17020 682 aaPredicted RBP8.81□□□□□ -1
TPM3-214ENST00000466010 CTHP32929 405 aa8.81□□□□□ -1
TPM3-214ENST00000466010 ANKRD24Q8TF21 1146 aa8.81□□□□□ -1
TPM3-214ENST00000466010 IP6K1Q92551 441 aa8.81□□□□□ -1
TPM3-214ENST00000466010 NLRP2Q9NX02 1062 aa8.81□□□□□ -1
TPM3-214ENST00000466010 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
TPM3-214ENST00000466010 TNS2Q63HR2 1409 aa8.8□□□□□ -1
TPM3-214ENST00000466010 SMG6Q86US8 1419 aaKnown RBP8.8□□□□□ -1
TPM3-214ENST00000466010 JUNDP17535 347 aa8.8□□□□□ -1
TPM3-214ENST00000466010 AMPHP49418 695 aa8.8□□□□□ -1
TPM3-214ENST00000466010 DPYDQ12882 1025 aa8.8□□□□□ -1
TPM3-214ENST00000466010 OGFOD1Q8N543 542 aa8.8□□□□□ -1
TPM3-214ENST00000466010 C1orf216Q8TAB5 229 aa8.8□□□□□ -1
TPM3-214ENST00000466010 GIPC2Q8TF65 315 aa8.8□□□□□ -1
TPM3-214ENST00000466010 MAP10Q9P2G4 905 aa8.8□□□□□ -1
TPM3-214ENST00000466010 FAM208AQ9UK61 1670 aaKnown RBP8.8□□□□□ -1
TPM3-214ENST00000466010 RGPD3A6NKT7 1758 aaPredicted RBP8.79□□□□□ -1
TPM3-214ENST00000466010 RGPD4Q7Z3J3 1758 aa8.79□□□□□ -1
TPM3-214ENST00000466010 FMNL1O95466 1100 aaPredicted RBP8.79□□□□□ -1
TPM3-214ENST00000466010 EZH2Q15910 746 aaKnown RBP8.79□□□□□ -1
TPM3-214ENST00000466010 PDXDC2PQ6P474 469 aa8.79□□□□□ -1
TPM3-214ENST00000466010 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
TPM3-214ENST00000466010 KIAA1522Q9P206 1035 aaPredicted RBP8.79□□□□□ -1
TPM3-214ENST00000466010 NOD1Q9Y239 953 aa8.79□□□□□ -1
TPM3-214ENST00000466010 WNK3Q9BYP7 1800 aa8.79□□□□□ -1
TPM3-214ENST00000466010 CGNL1Q0VF96 1302 aa8.79□□□□□ -1
TPM3-214ENST00000466010 LTN1O94822 1766 aa8.78□□□□□ -1
TPM3-214ENST00000466010 PEAK1Q9H792 1746 aa8.78□□□□□ -1
TPM3-214ENST00000466010 FYB1O15117 783 aa8.78□□□□□ -1
TPM3-214ENST00000466010 HMGB2P26583 209 aaKnown RBP8.78□□□□□ -1
TPM3-214ENST00000466010 HOXC9P31274 260 aa8.78□□□□□ -1
TPM3-214ENST00000466010 BLOC1S3Q6QNY0 202 aa8.78□□□□□ -1
TPM3-214ENST00000466010 MARCH10Q8NA82 808 aaPredicted RBP8.78□□□□□ -1
TPM3-214ENST00000466010 LRCH3Q96II8 777 aa8.78□□□□□ -1
TPM3-214ENST00000466010 DNAAF2Q9NVR5 837 aaKnown RBP8.78□□□□□ -1
TPM3-214ENST00000466010 EGFL7Q9UHF1 273 aa8.78□□□□□ -1
TPM3-214ENST00000466010 LRP5O75197 1615 aa8.78□□□□□ -1
TPM3-214ENST00000466010 MAP3K19Q56UN5 1328 aa8.78□□□□□ -1
TPM3-214ENST00000466010 TCF3P15923 654 aa8.77□□□□□ -1.01
TPM3-214ENST00000466010 LARGE2Q8N3Y3 721 aa8.77□□□□□ -1.01
TPM3-214ENST00000466010 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
TPM3-214ENST00000466010 ZFRQ96KR1 1074 aaKnown RBP8.77□□□□□ -1.01
TPM3-214ENST00000466010 FLT4P35916 1363 aa8.76□□□□□ -1.01
TPM3-214ENST00000466010 ANKRD33BA6NCL7 494 aa8.76□□□□□ -1.01
TPM3-214ENST00000466010 PBX2P40425 430 aa8.76□□□□□ -1.01
TPM3-214ENST00000466010 R3HDM1Q15032 1099 aaKnown RBP8.76□□□□□ -1.01
TPM3-214ENST00000466010 BRICD5Q6PL45 260 aa8.76□□□□□ -1.01
TPM3-214ENST00000466010 PHTF2Q8N3S3 785 aa8.76□□□□□ -1.01
TPM3-214ENST00000466010 VPS9D1Q9Y2B5 631 aa8.76□□□□□ -1.01
TPM3-214ENST00000466010 RGPD5Q99666 1765 aa8.76□□□□□ -1.01
TPM3-214ENST00000466010 RREB1Q92766 1687 aa8.75□□□□□ -1.01
TPM3-214ENST00000466010 INSRP06213 1382 aa8.75□□□□□ -1.01
TPM3-214ENST00000466010 NSD3Q9BZ95 1437 aa8.75□□□□□ -1.01
TPM3-214ENST00000466010 NR1I2O75469 434 aa8.75□□□□□ -1.01
TPM3-214ENST00000466010 CCNYL3P0C7X3 344 aa8.75□□□□□ -1.01
TPM3-214ENST00000466010 KCNH2Q12809 1159 aa8.75□□□□□ -1.01
TPM3-214ENST00000466010 GGNBP2Q9H3C7 697 aa8.75□□□□□ -1.01
TPM3-214ENST00000466010 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.75□□□□□ -1.01
TPM3-214ENST00000466010 ABL1P00519 1130 aa8.74□□□□□ -1.01
TPM3-214ENST00000466010 NPAS4Q8IUM7 802 aa8.74□□□□□ -1.01
TPM3-214ENST00000466010 GLYCTKQ8IVS8 523 aa8.74□□□□□ -1.01
TPM3-214ENST00000466010 RAPGEF4Q8WZA2 1011 aa8.74□□□□□ -1.01
TPM3-214ENST00000466010 NSD2O96028 1365 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 PLEKHG2Q9H7P9 1386 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 H3BRB1 525 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 POTEJP0CG39 1038 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 SEC13P55735 322 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 CLDN10P78369 228 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 RRS1Q15050 365 aaKnown RBP8.73□□□□□ -1.01
TPM3-214ENST00000466010 DMRTA1Q5VZB9 504 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 ZBTB33Q86T24 672 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 SIX5Q8N196 739 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 MRPL50Q8N5N7 158 aaKnown RBP8.73□□□□□ -1.01
TPM3-214ENST00000466010 ZCRB1Q8TBF4 217 aaKnown RBP8.73□□□□□ -1.01
TPM3-214ENST00000466010 LTV1Q96GA3 475 aaPredicted RBP8.73□□□□□ -1.01
TPM3-214ENST00000466010 ARHGAP9Q9BRR9 750 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 CARD14Q9BXL6 1004 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 TUT1Q9H6E5 874 aaKnown RBP8.73□□□□□ -1.01
TPM3-214ENST00000466010 DOLKQ9UPQ8 538 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 SBF2Q86WG5 1849 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 KIF20BQ96Q89 1820 aa8.73□□□□□ -1.01
TPM3-214ENST00000466010 MYOM1P52179 1685 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 NHSQ6T4R5 1651 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 NUP188Q5SRE5 1749 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 PRMT3O60678 531 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 HSP90B1P14625 803 aaKnown RBP8.72□□□□□ -1.01
TPM3-214ENST00000466010 VAMP1P23763 118 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 TXNRD1Q16881 649 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 SLC27A3Q5K4L6 730 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 TRAF7Q6Q0C0 670 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 ADAM32Q8TC27 787 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 NUDT12Q9BQG2 462 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 SPON1Q9HCB6 807 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms