RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 SMC3Q9UQE7 1217 aa11.83□□□□□ -0.52
CNNM3-203ENST00000465224 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
CNNM3-203ENST00000465224 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.52
CNNM3-203ENST00000465224 NCAPD2Q15021 1401 aa11.83□□□□□ -0.52
CNNM3-203ENST00000465224 GJB2P29033 226 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 NMIQ13287 307 aaPredicted RBP11.82□□□□□ -0.52
CNNM3-203ENST00000465224 NECAB1Q8N987 351 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 TMEM87AQ8NBN3 555 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 RUFY2Q8WXA3 655 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 ANKRD7Q92527 254 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 KCNB2Q92953 911 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 EVI5LQ96CN4 794 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.82□□□□□ -0.52
CNNM3-203ENST00000465224 TAF6LQ9Y6J9 622 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 PHRF1Q9P1Y6 1649 aaKnown RBP11.82□□□□□ -0.52
CNNM3-203ENST00000465224 F13A1P00488 732 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 MYL6BP14649 208 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 ME3Q16798 604 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 EPHA10Q5JZY3 1008 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 ERC1Q8IUD2 1116 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 BOLA2Q9H3K6 86 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 DDX21Q9NR30 783 aaKnown RBP eCLIP11.82□□□□□ -0.52
CNNM3-203ENST00000465224 RBM8AQ9Y5S9 174 aaKnown RBP11.82□□□□□ -0.52
CNNM3-203ENST00000465224 CCDC171Q6TFL3 1326 aa11.82□□□□□ -0.52
CNNM3-203ENST00000465224 FIBPO43427 364 aa11.81□□□□□ -0.52
CNNM3-203ENST00000465224 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
CNNM3-203ENST00000465224 ZC3H6P61129 1189 aaKnown RBP11.81□□□□□ -0.52
CNNM3-203ENST00000465224 VPS53Q5VIR6 699 aa11.81□□□□□ -0.52
CNNM3-203ENST00000465224 MPNDQ8N594 471 aa11.81□□□□□ -0.52
CNNM3-203ENST00000465224 SYAP1Q96A49 352 aaPredicted RBP11.81□□□□□ -0.52
CNNM3-203ENST00000465224 UTYO14607 1347 aa11.81□□□□□ -0.52
CNNM3-203ENST00000465224 GABPB1Q06547 395 aaPredicted RBP11.81□□□□□ -0.52
CNNM3-203ENST00000465224 G3BP1Q13283 466 aaKnown RBP eCLIP11.81□□□□□ -0.52
CNNM3-203ENST00000465224 CREB3L3Q68CJ9 461 aa11.81□□□□□ -0.52
CNNM3-203ENST00000465224 C17orf53Q8N3J3 647 aaPredicted RBP11.81□□□□□ -0.52
CNNM3-203ENST00000465224 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
CNNM3-203ENST00000465224 FEZ1Q99689 392 aa11.81□□□□□ -0.52
CNNM3-203ENST00000465224 MTMR6Q9Y217 621 aa11.81□□□□□ -0.52
CNNM3-203ENST00000465224 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
CNNM3-203ENST00000465224 STRCQ7RTU9 1775 aa11.81□□□□□ -0.52
CNNM3-203ENST00000465224 A0A0D9SFI3 127 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 DNM1Q05193 864 aaKnown RBP11.8□□□□□ -0.52
CNNM3-203ENST00000465224 KRT28Q7Z3Y7 464 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 RIC3Q7Z5B4 369 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 MAP4K1Q92918 833 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 EDC3Q96F86 508 aaKnown RBP11.8□□□□□ -0.52
CNNM3-203ENST00000465224 TCEANC2Q96MN5 208 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 OGFRQ9NZT2 677 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 TPCN1Q9ULQ1 816 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 NOLC1Q14978 699 aaKnown RBP eCLIP11.8□□□□□ -0.52
CNNM3-203ENST00000465224 ZNF790Q6PG37 636 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 TM6SF1Q9BZW5 370 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 SLIT3O75094 1523 aa11.8□□□□□ -0.52
CNNM3-203ENST00000465224 SLC27A2O14975 620 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 XAGE3Q8WTP9 111 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 PIBF1Q8WXW3 757 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 CARD10Q9BWT7 1032 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 RGPD5Q99666 1765 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 NEURL1BA8MQ27 555 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 CHGBP05060 677 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 UBE2HP62256 183 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 CCDC183Q5T5S1 534 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 COPS6Q7L5N1 327 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 BANK1Q8NDB2 785 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 OVOS2A0A0G2JMS6 1433 aa11.79□□□□□ -0.52
CNNM3-203ENST00000465224 SIPA1L3O60292 1781 aaPredicted RBP11.79□□□□□ -0.52
CNNM3-203ENST00000465224 DDX58O95786 925 aaKnown RBP11.78□□□□□ -0.52
CNNM3-203ENST00000465224 ZNF589Q86UQ0 364 aaPredicted RBP11.78□□□□□ -0.52
CNNM3-203ENST00000465224 MYD88Q99836 296 aa11.78□□□□□ -0.52
CNNM3-203ENST00000465224 TSPYL1Q9H0U9 437 aa11.78□□□□□ -0.52
CNNM3-203ENST00000465224 NDUFB9Q9Y6M9 179 aa11.78□□□□□ -0.52
CNNM3-203ENST00000465224 PHF14O94880 888 aa11.78□□□□□ -0.52
CNNM3-203ENST00000465224 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
CNNM3-203ENST00000465224 TNNT3P45378 269 aaPredicted RBP11.78□□□□□ -0.52
CNNM3-203ENST00000465224 DDX17Q92841 729 aaKnown RBP11.78□□□□□ -0.52
CNNM3-203ENST00000465224 TRERF1Q96PN7 1200 aa11.78□□□□□ -0.52
CNNM3-203ENST00000465224 USP16Q9Y5T5 823 aa11.78□□□□□ -0.52
CNNM3-203ENST00000465224 ERBB3P21860 1342 aa11.78□□□□□ -0.52
CNNM3-203ENST00000465224 TMEM94Q12767 1356 aa11.78□□□□□ -0.52
CNNM3-203ENST00000465224 VPS37CA5D8V6 355 aaPredicted RBP11.77□□□□□ -0.52
CNNM3-203ENST00000465224 ZKSCAN1P17029 563 aaPredicted RBP11.77□□□□□ -0.52
CNNM3-203ENST00000465224 GCKRQ14397 625 aa11.77□□□□□ -0.52
CNNM3-203ENST00000465224 TERF2Q15554 542 aa11.77□□□□□ -0.52
CNNM3-203ENST00000465224 FAM173BQ6P4H8 233 aa11.77□□□□□ -0.52
CNNM3-203ENST00000465224 GIMAP6Q6P9H5 292 aa11.77□□□□□ -0.52
CNNM3-203ENST00000465224 ZNF496Q96IT1 587 aaPredicted RBP11.77□□□□□ -0.52
CNNM3-203ENST00000465224 ZSCAN31Q96LW9 406 aaPredicted RBP11.77□□□□□ -0.52
CNNM3-203ENST00000465224 FSD1Q9BTV5 496 aa11.77□□□□□ -0.52
CNNM3-203ENST00000465224 SLC52A2Q9HAB3 445 aa11.77□□□□□ -0.52
CNNM3-203ENST00000465224 USP25Q9UHP3 1055 aa11.77□□□□□ -0.52
CNNM3-203ENST00000465224 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.52
CNNM3-203ENST00000465224 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.53
CNNM3-203ENST00000465224 SH2B1Q9NRF2 756 aaPredicted RBP11.77□□□□□ -0.53
CNNM3-203ENST00000465224 NLRP2Q9NX02 1062 aa11.77□□□□□ -0.53
CNNM3-203ENST00000465224 LRP10Q7Z4F1 713 aa11.76□□□□□ -0.53
CNNM3-203ENST00000465224 EFCC1Q9HA90 598 aa11.76□□□□□ -0.53
CNNM3-203ENST00000465224 SNRKQ9NRH2 765 aa11.76□□□□□ -0.53
CNNM3-203ENST00000465224 NPHP3Q7Z494 1330 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms