RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 SLAIN2Q9P270 581 aa22.43■■□□□ 1.18
TSPAN4-210ENST00000464987 SMC3Q9UQE7 1217 aa22.43■■□□□ 1.18
TSPAN4-210ENST00000464987 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.43■■□□□ 1.18
TSPAN4-210ENST00000464987 PAPPAQ13219 1627 aa22.43■■□□□ 1.18
TSPAN4-210ENST00000464987 STX6O43752 255 aa22.42■■□□□ 1.18
TSPAN4-210ENST00000464987 ATP5JP18859 108 aa22.42■■□□□ 1.18
TSPAN4-210ENST00000464987 NECAB1Q8N987 351 aa22.42■■□□□ 1.18
TSPAN4-210ENST00000464987 ZNF335Q9H4Z2 1342 aaPredicted RBP22.42■■□□□ 1.18
TSPAN4-210ENST00000464987 H7C1W4 665 aa22.42■■□□□ 1.18
TSPAN4-210ENST00000464987 MBD3O95983 291 aa22.42■■□□□ 1.18
TSPAN4-210ENST00000464987 ZSCAN22P10073 491 aaPredicted RBP22.42■■□□□ 1.18
TSPAN4-210ENST00000464987 GJB2P29033 226 aa22.42■■□□□ 1.18
TSPAN4-210ENST00000464987 TPCN1Q9ULQ1 816 aa22.42■■□□□ 1.18
TSPAN4-210ENST00000464987 CNPY2Q9Y2B0 182 aa22.42■■□□□ 1.18
TSPAN4-210ENST00000464987 ERVV-2B6SEH9 535 aa22.41■■□□□ 1.18
TSPAN4-210ENST00000464987 IL2RBP14784 551 aa22.41■■□□□ 1.18
TSPAN4-210ENST00000464987 DNAJC2Q99543 621 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-210ENST00000464987 LRSAM1Q6UWE0 723 aa22.41■■□□□ 1.18
TSPAN4-210ENST00000464987 SEC62Q99442 399 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-210ENST00000464987 TOGARAM1Q9Y4F4 1720 aa22.41■■□□□ 1.18
TSPAN4-210ENST00000464987 TPRNQ4KMQ1 711 aa22.4■■□□□ 1.18
TSPAN4-210ENST00000464987 CCDC129Q6ZRS4 1044 aa22.4■■□□□ 1.18
TSPAN4-210ENST00000464987 TRIM44Q96DX7 344 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-210ENST00000464987 PPP1R9BQ96SB3 815 aa22.4■■□□□ 1.18
TSPAN4-210ENST00000464987 CCDC173Q0VFZ6 552 aa22.39■■□□□ 1.18
TSPAN4-210ENST00000464987 TAF5LO75529 589 aa22.39■■□□□ 1.17
TSPAN4-210ENST00000464987 NKX1-1Q15270 411 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-210ENST00000464987 ATG9AQ7Z3C6 839 aa22.39■■□□□ 1.17
TSPAN4-210ENST00000464987 CWC25Q9NXE8 425 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-210ENST00000464987 JCADQ9P266 1359 aa22.39■■□□□ 1.17
TSPAN4-210ENST00000464987 ZNF609O15014 1411 aa22.39■■□□□ 1.17
TSPAN4-210ENST00000464987 ESPNB1AK53 854 aa22.38■■□□□ 1.17
TSPAN4-210ENST00000464987 DDX46Q7L014 1031 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-210ENST00000464987 CARD10Q9BWT7 1032 aa22.38■■□□□ 1.17
TSPAN4-210ENST00000464987 F13A1P00488 732 aa22.38■■□□□ 1.17
TSPAN4-210ENST00000464987 SLFNL1Q499Z3 407 aa22.38■■□□□ 1.17
TSPAN4-210ENST00000464987 ZNF594Q96JF6 807 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-210ENST00000464987 CLCN1P35523 988 aa22.37■■□□□ 1.17
TSPAN4-210ENST00000464987 KAT6BQ8WYB5 2073 aa22.37■■□□□ 1.17
TSPAN4-210ENST00000464987 ZSCAN31Q96LW9 406 aaPredicted RBP22.37■■□□□ 1.17
TSPAN4-210ENST00000464987 SH2B1Q9NRF2 756 aaPredicted RBP22.37■■□□□ 1.17
TSPAN4-210ENST00000464987 TIMM10P62072 90 aa22.36■■□□□ 1.17
TSPAN4-210ENST00000464987 LRRC24Q50LG9 513 aa22.36■■□□□ 1.17
TSPAN4-210ENST00000464987 HAUS7Q99871 368 aa22.36■■□□□ 1.17
TSPAN4-210ENST00000464987 MTMR6Q9Y217 621 aa22.36■■□□□ 1.17
TSPAN4-210ENST00000464987 BLOC1S2Q6QNY1 142 aa22.35■■□□□ 1.17
TSPAN4-210ENST00000464987 NEUROD6Q96NK8 337 aa22.35■■□□□ 1.17
TSPAN4-210ENST00000464987 TOB2Q14106 344 aaPredicted RBP22.35■■□□□ 1.17
TSPAN4-210ENST00000464987 ZNF330Q9Y3S2 320 aaPredicted RBP22.35■■□□□ 1.17
TSPAN4-210ENST00000464987 TNS2Q63HR2 1409 aa22.34■■□□□ 1.17
TSPAN4-210ENST00000464987 RPS6KB1P23443 525 aa22.34■■□□□ 1.17
TSPAN4-210ENST00000464987 PSMA5P28066 241 aa22.34■■□□□ 1.17
TSPAN4-210ENST00000464987 EVA1CP58658 441 aa22.34■■□□□ 1.17
TSPAN4-210ENST00000464987 RNF20Q5VTR2 975 aa22.34■■□□□ 1.17
TSPAN4-210ENST00000464987 TMEM87AQ8NBN3 555 aa22.34■■□□□ 1.17
TSPAN4-210ENST00000464987 RNF214Q8ND24 703 aa22.34■■□□□ 1.17
TSPAN4-210ENST00000464987 FIBPO43427 364 aa22.33■■□□□ 1.17
TSPAN4-210ENST00000464987 ANP32BQ92688 251 aaKnown RBP22.33■■□□□ 1.17
TSPAN4-210ENST00000464987 LAMA4Q16363 1823 aa22.33■■□□□ 1.16
TSPAN4-210ENST00000464987 USPL1Q5W0Q7 1092 aa22.33■■□□□ 1.16
TSPAN4-210ENST00000464987 PUS3Q9BZE2 481 aaKnown RBP22.33■■□□□ 1.16
TSPAN4-210ENST00000464987 DNM1Q05193 864 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-210ENST00000464987 CCDC191Q8NCU4 936 aa22.32■■□□□ 1.16
TSPAN4-210ENST00000464987 VPS37CA5D8V6 355 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-210ENST00000464987 GOLIM4O00461 696 aa22.31■■□□□ 1.16
TSPAN4-210ENST00000464987 STK3Q13188 491 aa22.31■■□□□ 1.16
TSPAN4-210ENST00000464987 TSGA10IPQ3SY00 556 aa22.31■■□□□ 1.16
TSPAN4-210ENST00000464987 ASAP1Q9ULH1 1129 aa22.31■■□□□ 1.16
TSPAN4-210ENST00000464987 HMG20BQ9P0W2 317 aa22.3■■□□□ 1.16
TSPAN4-210ENST00000464987 CYP21A2P08686 494 aa22.3■■□□□ 1.16
TSPAN4-210ENST00000464987 MCMDC2Q4G0Z9 681 aa22.3■■□□□ 1.16
TSPAN4-210ENST00000464987 KBTBD3Q8NAB2 608 aa22.3■■□□□ 1.16
TSPAN4-210ENST00000464987 TMOD3Q9NYL9 352 aa22.3■■□□□ 1.16
TSPAN4-210ENST00000464987 ITGB4P16144 1822 aa22.29■■□□□ 1.16
TSPAN4-210ENST00000464987 CCDC85AQ96PX6 553 aaPredicted RBP22.29■■□□□ 1.16
TSPAN4-210ENST00000464987 EYA2O00167 538 aa22.29■■□□□ 1.16
TSPAN4-210ENST00000464987 CDC37L1Q7L3B6 337 aa22.29■■□□□ 1.16
TSPAN4-210ENST00000464987 DNAJC10Q8IXB1 793 aa22.29■■□□□ 1.16
TSPAN4-210ENST00000464987 PDLIM2Q96JY6 352 aa22.29■■□□□ 1.16
TSPAN4-210ENST00000464987 RFX7Q2KHR2 1363 aa22.28■■□□□ 1.16
TSPAN4-210ENST00000464987 IL15P40933 162 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-210ENST00000464987 LARP1BQ659C4 914 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-210ENST00000464987 PIGBQ92521 554 aa22.28■■□□□ 1.16
TSPAN4-210ENST00000464987 SYAP1Q96A49 352 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-210ENST00000464987 ISCA1Q9BUE6 129 aa22.28■■□□□ 1.16
TSPAN4-210ENST00000464987 PAG1Q9NWQ8 432 aa22.28■■□□□ 1.16
TSPAN4-210ENST00000464987 FAM173BQ6P4H8 233 aa22.27■■□□□ 1.16
TSPAN4-210ENST00000464987 FERMT3Q86UX7 667 aa22.27■■□□□ 1.16
TSPAN4-210ENST00000464987 TSPY26PQ9H489 355 aa22.27■■□□□ 1.16
TSPAN4-210ENST00000464987 A0A1B0GUL7 405 aa22.27■■□□□ 1.16
TSPAN4-210ENST00000464987 NEK1Q96PY6 1258 aa22.27■■□□□ 1.16
TSPAN4-210ENST00000464987 ALDH8A1Q9H2A2 487 aaPredicted RBP22.27■■□□□ 1.16
TSPAN4-210ENST00000464987 NHSL1Q5SYE7 1610 aa22.26■■□□□ 1.15
TSPAN4-210ENST00000464987 A0A0G2JLW4 131 aa22.26■■□□□ 1.15
TSPAN4-210ENST00000464987 UBE2HP62256 183 aa22.26■■□□□ 1.15
TSPAN4-210ENST00000464987 TCIRG1Q13488 830 aa22.26■■□□□ 1.15
TSPAN4-210ENST00000464987 STOX1Q6ZVD7 989 aa22.26■■□□□ 1.15
TSPAN4-210ENST00000464987 LRRC2Q9BYS8 371 aa22.26■■□□□ 1.15
TSPAN4-210ENST00000464987 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.26■■□□□ 1.15
TSPAN4-210ENST00000464987 PALLDQ8WX93 1383 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms