RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 ANKRD36CQ5JPF3 1778 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 CHGBP05060 677 aa13.17□□□□□ -0.3
PITRM1-209ENST00000464395 TFCP2Q12800 502 aa13.17□□□□□ -0.3
PITRM1-209ENST00000464395 CNPY2Q9Y2B0 182 aa13.17□□□□□ -0.3
PITRM1-209ENST00000464395 FUCA2Q9BTY2 467 aa13.17□□□□□ -0.3
PITRM1-209ENST00000464395 NEXNQ0ZGT2 675 aa13.17□□□□□ -0.3
PITRM1-209ENST00000464395 ZSCAN31Q96LW9 406 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-209ENST00000464395 SH2B1Q9NRF2 756 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-209ENST00000464395 NCLP19338 710 aaKnown RBP13.16□□□□□ -0.3
PITRM1-209ENST00000464395 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.16□□□□□ -0.3
PITRM1-209ENST00000464395 MYH7P12883 1935 aa13.16□□□□□ -0.3
PITRM1-209ENST00000464395 GJB2P29033 226 aa13.16□□□□□ -0.3
PITRM1-209ENST00000464395 HAUS7Q99871 368 aa13.16□□□□□ -0.3
PITRM1-209ENST00000464395 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
PITRM1-209ENST00000464395 AKAP11Q9UKA4 1901 aa13.16□□□□□ -0.3
PITRM1-209ENST00000464395 PLCH1Q4KWH8 1693 aa13.15□□□□□ -0.3
PITRM1-209ENST00000464395 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
PITRM1-209ENST00000464395 DTNBO60941 627 aa13.15□□□□□ -0.3
PITRM1-209ENST00000464395 RPS6KB1P23443 525 aa13.15□□□□□ -0.3
PITRM1-209ENST00000464395 UBE3BQ7Z3V4 1068 aa13.15□□□□□ -0.3
PITRM1-209ENST00000464395 CCDC83Q8IWF9 413 aa13.15□□□□□ -0.3
PITRM1-209ENST00000464395 ERVV-2B6SEH9 535 aa13.15□□□□□ -0.31
PITRM1-209ENST00000464395 KLHL34Q8N239 644 aa13.15□□□□□ -0.31
PITRM1-209ENST00000464395 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
PITRM1-209ENST00000464395 PTCD1O75127 700 aaKnown RBP13.14□□□□□ -0.31
PITRM1-209ENST00000464395 TTLL7Q6ZT98 887 aa13.14□□□□□ -0.31
PITRM1-209ENST00000464395 DBNDD2Q9BQY9 259 aa13.14□□□□□ -0.31
PITRM1-209ENST00000464395 CABP4P57796 275 aa13.14□□□□□ -0.31
PITRM1-209ENST00000464395 ZSCAN30Q86W11 494 aa13.14□□□□□ -0.31
PITRM1-209ENST00000464395 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
PITRM1-209ENST00000464395 MYH3P11055 1940 aa13.14□□□□□ -0.31
PITRM1-209ENST00000464395 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
PITRM1-209ENST00000464395 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
PITRM1-209ENST00000464395 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
PITRM1-209ENST00000464395 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
PITRM1-209ENST00000464395 A0A087WZG4 1122 aa13.13□□□□□ -0.31
PITRM1-209ENST00000464395 TTC5Q8N0Z6 440 aa13.13□□□□□ -0.31
PITRM1-209ENST00000464395 NECAB1Q8N987 351 aa13.13□□□□□ -0.31
PITRM1-209ENST00000464395 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
PITRM1-209ENST00000464395 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
PITRM1-209ENST00000464395 NDUFB9Q9Y6M9 179 aa13.13□□□□□ -0.31
PITRM1-209ENST00000464395 SH3TC1Q8TE82 1336 aa13.12□□□□□ -0.31
PITRM1-209ENST00000464395 LRP6O75581 1613 aa13.12□□□□□ -0.31
PITRM1-209ENST00000464395 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
PITRM1-209ENST00000464395 MYO5AQ9Y4I1 1855 aaKnown RBP13.12□□□□□ -0.31
PITRM1-209ENST00000464395 UBE2HP62256 183 aa13.12□□□□□ -0.31
PITRM1-209ENST00000464395 TICAM2Q86XR7 235 aa13.12□□□□□ -0.31
PITRM1-209ENST00000464395 ARAP2Q8WZ64 1704 aa13.12□□□□□ -0.31
PITRM1-209ENST00000464395 CSB-PGBD3P0DP91 1061 aa13.11□□□□□ -0.31
PITRM1-209ENST00000464395 ZCRB1Q8TBF4 217 aaKnown RBP13.11□□□□□ -0.31
PITRM1-209ENST00000464395 SEC62Q99442 399 aaKnown RBP13.11□□□□□ -0.31
PITRM1-209ENST00000464395 ZNF500O60304 480 aaPredicted RBP13.11□□□□□ -0.31
PITRM1-209ENST00000464395 LMBR1LQ6UX01 489 aa13.11□□□□□ -0.31
PITRM1-209ENST00000464395 STOX1Q6ZVD7 989 aa13.11□□□□□ -0.31
PITRM1-209ENST00000464395 ISCA1Q9BUE6 129 aa13.11□□□□□ -0.31
PITRM1-209ENST00000464395 NUP98P52948 1817 aa13.11□□□□□ -0.31
PITRM1-209ENST00000464395 DNM1Q05193 864 aaKnown RBP13.11□□□□□ -0.31
PITRM1-209ENST00000464395 FOXD4L6Q3SYB3 417 aaPredicted RBP13.11□□□□□ -0.31
PITRM1-209ENST00000464395 FOXD4L3Q6VB84 417 aaPredicted RBP13.11□□□□□ -0.31
PITRM1-209ENST00000464395 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
PITRM1-209ENST00000464395 TSPY26PQ9H489 355 aa13.11□□□□□ -0.31
PITRM1-209ENST00000464395 LRP5O75197 1615 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 A1BGP04217 495 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 ZKSCAN1P17029 563 aaPredicted RBP13.1□□□□□ -0.31
PITRM1-209ENST00000464395 CYP21A2P08686 494 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 PSMA5P28066 241 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 CCDC183Q5T5S1 534 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 CCDC129Q6ZRS4 1044 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 CDC37L1Q7L3B6 337 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 PKNOX2Q96KN3 472 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 AGXT2Q9BYV1 514 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 SLIT2O94813 1529 aa13.1□□□□□ -0.31
PITRM1-209ENST00000464395 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 C4BP0C0L5 1744 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 FOXP2O15409 715 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 KBTBD3Q8NAB2 608 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 ATG3Q9NT62 314 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 RREB1Q92766 1687 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 COL16A1Q07092 1604 aaPredicted RBP13.09□□□□□ -0.31
PITRM1-209ENST00000464395 TRIM44Q96DX7 344 aaPredicted RBP13.09□□□□□ -0.31
PITRM1-209ENST00000464395 TCEANC2Q96MN5 208 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 ELP1O95163 1332 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 CIAO1O76071 339 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 SLFNL1Q499Z3 407 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 CCDC191Q8NCU4 936 aa13.09□□□□□ -0.31
PITRM1-209ENST00000464395 LRRC24Q50LG9 513 aa13.08□□□□□ -0.32
PITRM1-209ENST00000464395 BLOC1S2Q6QNY1 142 aa13.08□□□□□ -0.32
PITRM1-209ENST00000464395 TTC6Q86TZ1 520 aa13.08□□□□□ -0.32
PITRM1-209ENST00000464395 A0A0G2JLW4 131 aa13.08□□□□□ -0.32
PITRM1-209ENST00000464395 MCMDC2Q4G0Z9 681 aa13.08□□□□□ -0.32
PITRM1-209ENST00000464395 CWC25Q9NXE8 425 aaPredicted RBP13.08□□□□□ -0.32
PITRM1-209ENST00000464395 COL22A1Q8NFW1 1626 aaPredicted RBP13.08□□□□□ -0.32
PITRM1-209ENST00000464395 CICQ96RK0 1608 aaPredicted RBP13.08□□□□□ -0.32
PITRM1-209ENST00000464395 ECM29Q5VYK3 1845 aa13.08□□□□□ -0.32
PITRM1-209ENST00000464395 DOCK2Q92608 1830 aa13.08□□□□□ -0.32
PITRM1-209ENST00000464395 OFD1O75665 1012 aa13.07□□□□□ -0.32
PITRM1-209ENST00000464395 EXOSC10Q01780 885 aaKnown RBP13.07□□□□□ -0.32
PITRM1-209ENST00000464395 UVSSAQ2YD98 709 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms