RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 PATL2C9JE40 543 aaKnown RBP15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 KRT24Q2M2I5 525 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 NEO1Q92859 1461 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 GCC2Q8IWJ2 1684 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 GSDMDP57764 484 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 FAM177A1Q8N128 213 aaPredicted RBP15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 CALML4Q96GE6 196 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 MAP3K19Q56UN5 1328 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 NCKAP5LQ9HCH0 1330 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 ATP6V1AP38606 617 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 RBM10P98175 930 aaKnown RBP15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 KLHL40Q2TBA0 621 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 GBP3Q9H0R5 595 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 TFIP11Q9UBB9 837 aaKnown RBP15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 RAD50Q92878 1312 aa15.54■□□□□ 0.08
CHRNA4-202ENST00000463705 UQCRHLA0A096LP55 91 aa15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 UQCRHP07919 91 aa15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 VPS36Q86VN1 386 aa15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 UTP14AQ9BVJ6 771 aaKnown RBP15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 TCP11L1Q9NUJ3 509 aa15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 ZSCAN22P10073 491 aaPredicted RBP15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 LMBR1LQ6UX01 489 aa15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 CABP5Q9NP86 173 aa15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 UBAP1LF5GYI3 381 aa15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 HAND2P61296 217 aa15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 CLIP2Q9UDT6 1046 aa15.53■□□□□ 0.08
CHRNA4-202ENST00000463705 RNMTO43148 476 aaKnown RBP15.52■□□□□ 0.08
CHRNA4-202ENST00000463705 TRAF1Q13077 416 aa15.52■□□□□ 0.08
CHRNA4-202ENST00000463705 CKAP2LQ8IYA6 745 aa15.52■□□□□ 0.08
CHRNA4-202ENST00000463705 SETDB2Q96T68 719 aa15.52■□□□□ 0.08
CHRNA4-202ENST00000463705 GCP02774 474 aa15.52■□□□□ 0.08
CHRNA4-202ENST00000463705 HOXB7P09629 217 aa15.52■□□□□ 0.08
CHRNA4-202ENST00000463705 WTAPQ15007 396 aa15.52■□□□□ 0.08
CHRNA4-202ENST00000463705 RBM8AQ9Y5S9 174 aaKnown RBP15.52■□□□□ 0.08
CHRNA4-202ENST00000463705 GNAT2P19087 354 aa15.52■□□□□ 0.07
CHRNA4-202ENST00000463705 DDB1Q16531 1140 aa15.52■□□□□ 0.07
CHRNA4-202ENST00000463705 FAM114A1Q8IWE2 563 aa15.52■□□□□ 0.07
CHRNA4-202ENST00000463705 PDCL2Q8N4E4 241 aa15.52■□□□□ 0.07
CHRNA4-202ENST00000463705 ESR2Q92731 530 aa15.52■□□□□ 0.07
CHRNA4-202ENST00000463705 ZMYM4Q5VZL5 1548 aa15.52■□□□□ 0.07
CHRNA4-202ENST00000463705 KCNA6P17658 529 aa15.52■□□□□ 0.07
CHRNA4-202ENST00000463705 PTPN14Q15678 1187 aa15.52■□□□□ 0.07
CHRNA4-202ENST00000463705 KIF5CO60282 957 aa15.51■□□□□ 0.07
CHRNA4-202ENST00000463705 CETN2P41208 172 aa15.51■□□□□ 0.07
CHRNA4-202ENST00000463705 MICU3Q86XE3 530 aa15.51■□□□□ 0.07
CHRNA4-202ENST00000463705 NLRP3Q96P20 1036 aa15.51■□□□□ 0.07
CHRNA4-202ENST00000463705 IL13P35225 146 aa15.51■□□□□ 0.07
CHRNA4-202ENST00000463705 GNAQP50148 359 aa15.51■□□□□ 0.07
CHRNA4-202ENST00000463705 SLC26A6Q9BXS9 759 aa15.51■□□□□ 0.07
CHRNA4-202ENST00000463705 WDHD1O75717 1129 aaPredicted RBP15.51■□□□□ 0.07
CHRNA4-202ENST00000463705 KLHL10Q6JEL2 608 aa15.51■□□□□ 0.07
CHRNA4-202ENST00000463705 KLF18A0A0U1RQI7 1052 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 YEATS4O95619 227 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 CACNA2D4Q7Z3S7 1137 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 NFATC2IPQ8NCF5 419 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 BRF1Q92994 677 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 ZBTB43O43298 467 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 RBM25P49756 843 aaKnown RBP15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 STXBP4Q6ZWJ1 553 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 PAG1Q9NWQ8 432 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 CYP7A1P22680 504 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 CDCA7Q9BWT1 371 aaPredicted RBP15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 USP25Q9UHP3 1055 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 H0YHG0 523 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 ZBTB7BO15156 539 aaPredicted RBP15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 MCM3P25205 808 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 CCDC102BQ68D86 513 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 UBXN4Q92575 508 aa15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 PA2G4Q9UQ80 394 aaKnown RBP15.5■□□□□ 0.07
CHRNA4-202ENST00000463705 PLEKHM2Q8IWE5 1019 aa15.49■□□□□ 0.07
CHRNA4-202ENST00000463705 KCNG4Q8TDN1 519 aa15.49■□□□□ 0.07
CHRNA4-202ENST00000463705 RMND1Q9NWS8 449 aa15.49■□□□□ 0.07
CHRNA4-202ENST00000463705 ZNF804AQ7Z570 1209 aa15.49■□□□□ 0.07
CHRNA4-202ENST00000463705 SLC4A4Q9Y6R1 1079 aa15.49■□□□□ 0.07
CHRNA4-202ENST00000463705 DZIP3Q86Y13 1208 aaKnown RBP15.49■□□□□ 0.07
CHRNA4-202ENST00000463705 KIF18AQ8NI77 898 aa15.49■□□□□ 0.07
CHRNA4-202ENST00000463705 RBM27Q9P2N5 1060 aaKnown RBP15.49■□□□□ 0.07
CHRNA4-202ENST00000463705 MAGI3Q5TCQ9 1506 aa15.49■□□□□ 0.07
CHRNA4-202ENST00000463705 NECAB1Q8N987 351 aa15.49■□□□□ 0.07
CHRNA4-202ENST00000463705 NBPF7P0C2Y1 421 aaPredicted RBP15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 ZRSR2Q15696 482 aaKnown RBP15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 CCDC191Q8NCU4 936 aa15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 RTL9Q8NET4 1388 aa15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 GOLGA6L9A6NEM1 432 aa15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 RNF113AO15541 343 aaKnown RBP15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 CASQ1P31415 396 aa15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 USO1O60763 962 aaKnown RBP15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 CALM1P0DP23 149 aa15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 CALM2P0DP24 149 aa15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 CALM3P0DP25 149 aa15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 NIP7Q9Y221 180 aaKnown RBP eCLIP15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 NMIQ13287 307 aaPredicted RBP15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 SEPT7Q16181 437 aaKnown RBP15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
CHRNA4-202ENST00000463705 RTN1Q16799 776 aa15.47■□□□□ 0.07
CHRNA4-202ENST00000463705 CWF19L2Q2TBE0 894 aaKnown RBP15.47■□□□□ 0.07
CHRNA4-202ENST00000463705 SIRT1Q96EB6 747 aa15.47■□□□□ 0.07
CHRNA4-202ENST00000463705 DDX21Q9NR30 783 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHRNA4-202ENST00000463705 ZFYVE16Q7Z3T8 1539 aa15.47■□□□□ 0.07
CHRNA4-202ENST00000463705 MYO1BO43795 1136 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms