RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CCDC87Q9NVE4 849 aa15.51■□□□□ 0.07
VAPB-203ENST00000463370 AK9Q5TCS8 1911 aa15.51■□□□□ 0.07
VAPB-203ENST00000463370 KCNQ4P56696 695 aa15.51■□□□□ 0.07
VAPB-203ENST00000463370 CCDC57Q2TAC2 916 aa15.51■□□□□ 0.07
VAPB-203ENST00000463370 DNAJC2Q99543 621 aaKnown RBP15.51■□□□□ 0.07
VAPB-203ENST00000463370 EPB41L2O43491 1005 aaKnown RBP15.5■□□□□ 0.07
VAPB-203ENST00000463370 KIAA1211Q6ZU35 1233 aa15.5■□□□□ 0.07
VAPB-203ENST00000463370 FNBP4Q8N3X1 1017 aaPredicted RBP15.5■□□□□ 0.07
VAPB-203ENST00000463370 TNPO1Q92973 898 aaKnown RBP15.5■□□□□ 0.07
VAPB-203ENST00000463370 TRMT112Q9UI30 125 aaKnown RBP15.5■□□□□ 0.07
VAPB-203ENST00000463370 ERVV-1B6SEH8 477 aa15.5■□□□□ 0.07
VAPB-203ENST00000463370 MCM4P33991 863 aa15.5■□□□□ 0.07
VAPB-203ENST00000463370 RAB3GAP1Q15042 981 aa15.5■□□□□ 0.07
VAPB-203ENST00000463370 ZNF589Q86UQ0 364 aaPredicted RBP15.5■□□□□ 0.07
VAPB-203ENST00000463370 RUFY2Q8WXA3 655 aa15.5■□□□□ 0.07
VAPB-203ENST00000463370 GREM2Q9H772 168 aa15.5■□□□□ 0.07
VAPB-203ENST00000463370 CIZ1Q9ULV3 898 aaPredicted RBP15.5■□□□□ 0.07
VAPB-203ENST00000463370 CIAO1O76071 339 aa15.49■□□□□ 0.07
VAPB-203ENST00000463370 HSP90AB3PQ58FF7 597 aa15.49■□□□□ 0.07
VAPB-203ENST00000463370 ZNF34Q8IZ26 560 aa15.49■□□□□ 0.07
VAPB-203ENST00000463370 TTLL11Q8NHH1 800 aa15.49■□□□□ 0.07
VAPB-203ENST00000463370 TMX3Q96JJ7 454 aa15.49■□□□□ 0.07
VAPB-203ENST00000463370 HAUS7Q99871 368 aa15.49■□□□□ 0.07
VAPB-203ENST00000463370 ZNF609O15014 1411 aa15.49■□□□□ 0.07
VAPB-203ENST00000463370 A0A1B0GUL7 405 aa15.49■□□□□ 0.07
VAPB-203ENST00000463370 IRS4O14654 1257 aaPredicted RBP15.49■□□□□ 0.07
VAPB-203ENST00000463370 FAM182BQ5T319 152 aa15.49■□□□□ 0.07
VAPB-203ENST00000463370 DDX46Q7L014 1031 aaKnown RBP15.49■□□□□ 0.07
VAPB-203ENST00000463370 CDHR2Q9BYE9 1310 aa15.49■□□□□ 0.07
VAPB-203ENST00000463370 CPA1P15085 419 aa15.48■□□□□ 0.07
VAPB-203ENST00000463370 SSFA2P28290 1259 aa15.48■□□□□ 0.07
VAPB-203ENST00000463370 PKP1Q13835 747 aa15.48■□□□□ 0.07
VAPB-203ENST00000463370 GPR108Q9NPR9 543 aa15.48■□□□□ 0.07
VAPB-203ENST00000463370 CCDC171Q6TFL3 1326 aa15.48■□□□□ 0.07
VAPB-203ENST00000463370 FAM177BA6PVY3 158 aa15.48■□□□□ 0.07
VAPB-203ENST00000463370 CTSWP56202 376 aa15.48■□□□□ 0.07
VAPB-203ENST00000463370 IFIT5Q13325 482 aaKnown RBP15.48■□□□□ 0.07
VAPB-203ENST00000463370 SLFNL1Q499Z3 407 aa15.48■□□□□ 0.07
VAPB-203ENST00000463370 PRPF40BQ6NWY9 871 aaKnown RBP15.48■□□□□ 0.07
VAPB-203ENST00000463370 USP21Q9UK80 565 aa15.48■□□□□ 0.07
VAPB-203ENST00000463370 CAMTA2O94983 1202 aa15.47■□□□□ 0.07
VAPB-203ENST00000463370 ITGA6P23229 1130 aa15.47■□□□□ 0.07
VAPB-203ENST00000463370 ADORA1P30542 326 aa15.47■□□□□ 0.07
VAPB-203ENST00000463370 COL9A3Q14050 684 aaPredicted RBP15.47■□□□□ 0.07
VAPB-203ENST00000463370 ADCK5Q3MIX3 580 aa15.47■□□□□ 0.07
VAPB-203ENST00000463370 SNRKQ9NRH2 765 aa15.47■□□□□ 0.07
VAPB-203ENST00000463370 MED23Q9ULK4 1368 aa15.47■□□□□ 0.07
VAPB-203ENST00000463370 SUSD4Q5VX71 490 aa15.47■□□□□ 0.07
VAPB-203ENST00000463370 SMIM5Q71RC9 77 aa15.47■□□□□ 0.07
VAPB-203ENST00000463370 SEC62Q99442 399 aaKnown RBP15.47■□□□□ 0.07
VAPB-203ENST00000463370 HIP1O00291 1037 aa15.46■□□□□ 0.07
VAPB-203ENST00000463370 NECTIN1Q15223 517 aa15.46■□□□□ 0.07
VAPB-203ENST00000463370 TAF7LQ5H9L4 462 aa15.46■□□□□ 0.07
VAPB-203ENST00000463370 LINC00116Q8NCU8 138 aa15.46■□□□□ 0.07
VAPB-203ENST00000463370 CEP126Q9P2H0 1117 aa15.46■□□□□ 0.07
VAPB-203ENST00000463370 RBM8AQ9Y5S9 174 aaKnown RBP15.46■□□□□ 0.07
VAPB-203ENST00000463370 GOLIM4O00461 696 aa15.46■□□□□ 0.06
VAPB-203ENST00000463370 MAP4K1Q92918 833 aa15.46■□□□□ 0.06
VAPB-203ENST00000463370 LARP6Q9BRS8 491 aaKnown RBP15.46■□□□□ 0.06
VAPB-203ENST00000463370 TAF6LQ9Y6J9 622 aa15.46■□□□□ 0.06
VAPB-203ENST00000463370 RIC1Q4ADV7 1423 aa15.45■□□□□ 0.06
VAPB-203ENST00000463370 HCLS1P14317 486 aaPredicted RBP15.45■□□□□ 0.06
VAPB-203ENST00000463370 CCDC129Q6ZRS4 1044 aa15.45■□□□□ 0.06
VAPB-203ENST00000463370 TTC14Q96N46 770 aa15.45■□□□□ 0.06
VAPB-203ENST00000463370 GSE1Q14687 1217 aa15.44■□□□□ 0.06
VAPB-203ENST00000463370 RIPOR2Q9Y4F9 1068 aa15.44■□□□□ 0.06
VAPB-203ENST00000463370 EP400Q96L91 3159 aa15.44■□□□□ 0.06
VAPB-203ENST00000463370 SMARCC1Q92922 1105 aaPredicted RBP15.44■□□□□ 0.06
VAPB-203ENST00000463370 KCNB2Q92953 911 aa15.44■□□□□ 0.06
VAPB-203ENST00000463370 PDE8AO60658 829 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 CASTP20810 708 aaKnown RBP15.43■□□□□ 0.06
VAPB-203ENST00000463370 CREB3L3Q68CJ9 461 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 LDHAL6AQ6ZMR3 332 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 KBTBD3Q8NAB2 608 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 XAGE2Q96GT9 111 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 PAG1Q9NWQ8 432 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 MYH14Q7Z406 1995 aaKnown RBP15.43■□□□□ 0.06
VAPB-203ENST00000463370 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 TAF5LO75529 589 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 CYP2E1P05181 493 aaPredicted RBP15.43■□□□□ 0.06
VAPB-203ENST00000463370 MCM2P49736 904 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 CUL4AQ13619 759 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 JAKMIP1Q96N16 626 aaKnown RBP15.43■□□□□ 0.06
VAPB-203ENST00000463370 NUP98P52948 1817 aa15.43■□□□□ 0.06
VAPB-203ENST00000463370 ANKRD36CQ5JPF3 1778 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 ANKRD18BA2A2Z9 1011 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 SLC27A2O14975 620 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 IFIT1P09914 478 aaKnown RBP15.42■□□□□ 0.06
VAPB-203ENST00000463370 HSPA1LP34931 641 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 AK2P54819 239 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 SCARF1Q14162 830 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 ZDHHC9Q9Y397 364 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 KCNJ4P48050 445 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 METTL24Q5JXM2 366 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 RUFY3Q7L099 469 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 CERKQ8TCT0 537 aa15.42■□□□□ 0.06
VAPB-203ENST00000463370 NIP7Q9Y221 180 aaKnown RBP eCLIP15.42■□□□□ 0.06
VAPB-203ENST00000463370 RREB1Q92766 1687 aa15.41■□□□□ 0.06
VAPB-203ENST00000463370 PI16Q6UXB8 463 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms