RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 KCNA1Q09470 495 aa10.92□□□□□ -0.66
UBE4B-204ENST00000462658 LCE2CQ5TA81 110 aa10.92□□□□□ -0.66
UBE4B-204ENST00000462658 ETFBKMTQ8IXQ9 262 aa10.92□□□□□ -0.66
UBE4B-204ENST00000462658 CCER1Q8TC90 406 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-204ENST00000462658 SLC16A10Q8TF71 515 aa10.92□□□□□ -0.66
UBE4B-204ENST00000462658 ABHD17AQ96GS6 310 aa10.92□□□□□ -0.66
UBE4B-204ENST00000462658 PCDHGC4Q9Y5F7 938 aa10.92□□□□□ -0.66
UBE4B-204ENST00000462658 SUPT6HQ7KZ85 1726 aaKnown RBP10.92□□□□□ -0.66
UBE4B-204ENST00000462658 TROQ12816 1431 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-204ENST00000462658 KHNYNO15037 678 aaKnown RBP10.91□□□□□ -0.66
UBE4B-204ENST00000462658 BRD2P25440 801 aaKnown RBP10.91□□□□□ -0.66
UBE4B-204ENST00000462658 HIF1AQ16665 826 aa10.91□□□□□ -0.66
UBE4B-204ENST00000462658 FIGNL1Q6PIW4 674 aa10.91□□□□□ -0.66
UBE4B-204ENST00000462658 BTLAQ7Z6A9 289 aa10.91□□□□□ -0.66
UBE4B-204ENST00000462658 CEP63Q96MT8 703 aa10.91□□□□□ -0.66
UBE4B-204ENST00000462658 STIM2Q9P246 746 aa10.91□□□□□ -0.66
UBE4B-204ENST00000462658 DMGDHQ9UI17 866 aaKnown RBP10.91□□□□□ -0.66
UBE4B-204ENST00000462658 HCN2Q9UL51 889 aa10.91□□□□□ -0.66
UBE4B-204ENST00000462658 COL17A1Q9UMD9 1497 aaPredicted RBP10.91□□□□□ -0.66
UBE4B-204ENST00000462658 WDR7Q9Y4E6 1490 aa10.91□□□□□ -0.66
UBE4B-204ENST00000462658 ZBTB39O15060 712 aa10.9□□□□□ -0.66
UBE4B-204ENST00000462658 FAM50AQ14320 339 aaKnown RBP10.9□□□□□ -0.66
UBE4B-204ENST00000462658 SAMD5Q5TGI4 173 aa10.9□□□□□ -0.66
UBE4B-204ENST00000462658 TREML1Q86YW5 311 aa10.9□□□□□ -0.66
UBE4B-204ENST00000462658 NDFIP2Q9NV92 336 aa10.9□□□□□ -0.66
UBE4B-204ENST00000462658 GNEQ9Y223 722 aaKnown RBP10.9□□□□□ -0.66
UBE4B-204ENST00000462658 MICAL2O94851 1124 aa10.89□□□□□ -0.67
UBE4B-204ENST00000462658 VSIG8P0DPA2 414 aa10.89□□□□□ -0.67
UBE4B-204ENST00000462658 MPSTP25325 297 aa10.89□□□□□ -0.67
UBE4B-204ENST00000462658 IDH3AP50213 366 aa10.89□□□□□ -0.67
UBE4B-204ENST00000462658 TYRO3Q06418 890 aa10.89□□□□□ -0.67
UBE4B-204ENST00000462658 FOXR1Q6PIV2 292 aa10.89□□□□□ -0.67
UBE4B-204ENST00000462658 MYOM3Q5VTT5 1437 aa10.89□□□□□ -0.67
UBE4B-204ENST00000462658 H3BRB1 525 aa10.88□□□□□ -0.67
UBE4B-204ENST00000462658 MAPTP10636 758 aaKnown RBP10.88□□□□□ -0.67
UBE4B-204ENST00000462658 TNP2Q05952 138 aa10.88□□□□□ -0.67
UBE4B-204ENST00000462658 IER5Q5VY09 327 aa10.88□□□□□ -0.67
UBE4B-204ENST00000462658 FGD6Q6ZV73 1430 aa10.88□□□□□ -0.67
UBE4B-204ENST00000462658 KCTD17Q8N5Z5 321 aa10.88□□□□□ -0.67
UBE4B-204ENST00000462658 IRF7Q92985 503 aa10.88□□□□□ -0.67
UBE4B-204ENST00000462658 TRERF1Q96PN7 1200 aa10.88□□□□□ -0.67
UBE4B-204ENST00000462658 TUT1Q9H6E5 874 aaKnown RBP10.88□□□□□ -0.67
UBE4B-204ENST00000462658 STRN4Q9NRL3 753 aa10.88□□□□□ -0.67
UBE4B-204ENST00000462658 USP20Q9Y2K6 914 aa10.88□□□□□ -0.67
UBE4B-204ENST00000462658 ICMTO60725 284 aa10.87□□□□□ -0.67
UBE4B-204ENST00000462658 WFS1O76024 890 aa10.87□□□□□ -0.67
UBE4B-204ENST00000462658 FAM157BP0CG42 384 aa10.87□□□□□ -0.67
UBE4B-204ENST00000462658 FKBP4Q02790 459 aaKnown RBP eCLIP10.87□□□□□ -0.67
UBE4B-204ENST00000462658 SFSWAPQ12872 951 aaKnown RBP10.87□□□□□ -0.67
UBE4B-204ENST00000462658 GAS6Q14393 721 aa10.87□□□□□ -0.67
UBE4B-204ENST00000462658 GRIN2CQ14957 1233 aa10.87□□□□□ -0.67
UBE4B-204ENST00000462658 ATCAYQ86WG3 371 aa10.87□□□□□ -0.67
UBE4B-204ENST00000462658 BRD7Q9NPI1 651 aa10.87□□□□□ -0.67
UBE4B-204ENST00000462658 EGFL7Q9UHF1 273 aa10.87□□□□□ -0.67
UBE4B-204ENST00000462658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.87□□□□□ -0.67
UBE4B-204ENST00000462658 OPLAHO14841 1288 aa10.86□□□□□ -0.67
UBE4B-204ENST00000462658 ITGAEP38570 1179 aa10.86□□□□□ -0.67
UBE4B-204ENST00000462658 SF3B2Q13435 895 aaKnown RBP10.86□□□□□ -0.67
UBE4B-204ENST00000462658 RNFT1Q5M7Z0 435 aa10.86□□□□□ -0.67
UBE4B-204ENST00000462658 COL25A1Q9BXS0 654 aaPredicted RBP10.86□□□□□ -0.67
UBE4B-204ENST00000462658 ATXN7L1Q9ULK2 861 aaPredicted RBP10.86□□□□□ -0.67
UBE4B-204ENST00000462658 EFSO43281 561 aa10.85□□□□□ -0.67
UBE4B-204ENST00000462658 CD33P20138 364 aa10.85□□□□□ -0.67
UBE4B-204ENST00000462658 FGFR3P22607 806 aa10.85□□□□□ -0.67
UBE4B-204ENST00000462658 GLYCTKQ8IVS8 523 aa10.85□□□□□ -0.67
UBE4B-204ENST00000462658 ABTB2Q8N961 1025 aa10.85□□□□□ -0.67
UBE4B-204ENST00000462658 CFHR5Q9BXR6 569 aa10.85□□□□□ -0.67
UBE4B-204ENST00000462658 MIA2Q96PC5 1412 aa10.84□□□□□ -0.67
UBE4B-204ENST00000462658 KDM6BO15054 1643 aa10.84□□□□□ -0.67
UBE4B-204ENST00000462658 SOWAHDA6NJG2 315 aa10.84□□□□□ -0.67
UBE4B-204ENST00000462658 GRNP28799 593 aaKnown RBP10.84□□□□□ -0.67
UBE4B-204ENST00000462658 INPP5BP32019 993 aa10.84□□□□□ -0.67
UBE4B-204ENST00000462658 GMPRP36959 345 aa10.84□□□□□ -0.67
UBE4B-204ENST00000462658 ZAP70P43403 619 aa10.84□□□□□ -0.67
UBE4B-204ENST00000462658 EIF1AXP47813 144 aaKnown RBP10.84□□□□□ -0.67
UBE4B-204ENST00000462658 CTBSQ01459 385 aa10.84□□□□□ -0.67
UBE4B-204ENST00000462658 TREML4Q6UXN2 200 aa10.84□□□□□ -0.67
UBE4B-204ENST00000462658 PHF24Q9UPV7 400 aa10.84□□□□□ -0.67
UBE4B-204ENST00000462658 ABCA9Q8IUA7 1624 aa10.84□□□□□ -0.67
UBE4B-204ENST00000462658 ARSDP51689 593 aa10.83□□□□□ -0.68
UBE4B-204ENST00000462658 KRT76Q01546 638 aa10.83□□□□□ -0.68
UBE4B-204ENST00000462658 ECM1Q16610 540 aa10.83□□□□□ -0.68
UBE4B-204ENST00000462658 NOM1Q5C9Z4 860 aaKnown RBP10.83□□□□□ -0.68
UBE4B-204ENST00000462658 CFDP1Q9UEE9 299 aaPredicted RBP10.83□□□□□ -0.68
UBE4B-204ENST00000462658 FAM13AO94988 1023 aa10.82□□□□□ -0.68
UBE4B-204ENST00000462658 NPR3P17342 541 aa10.82□□□□□ -0.68
UBE4B-204ENST00000462658 RGL4Q8IZJ4 473 aa10.82□□□□□ -0.68
UBE4B-204ENST00000462658 GPR152Q8TDT2 470 aa10.82□□□□□ -0.68
UBE4B-204ENST00000462658 MARK1Q9P0L2 795 aa10.82□□□□□ -0.68
UBE4B-204ENST00000462658 KIF14Q15058 1648 aa10.82□□□□□ -0.68
UBE4B-204ENST00000462658 GPATCH8Q9UKJ3 1502 aaKnown RBP10.82□□□□□ -0.68
UBE4B-204ENST00000462658 TCOF1Q13428 1488 aaKnown RBP10.81□□□□□ -0.68
UBE4B-204ENST00000462658 PATL2C9JE40 543 aaKnown RBP10.81□□□□□ -0.68
UBE4B-204ENST00000462658 CNTNAP3BQ96NU0 1288 aa10.81□□□□□ -0.68
UBE4B-204ENST00000462658 CNTNAP3Q9BZ76 1288 aa10.81□□□□□ -0.68
UBE4B-204ENST00000462658 KCNH4Q9UQ05 1017 aa10.81□□□□□ -0.68
UBE4B-204ENST00000462658 RTCBQ9Y3I0 505 aaKnown RBP10.81□□□□□ -0.68
UBE4B-204ENST00000462658 PTPN23Q9H3S7 1636 aa10.8□□□□□ -0.68
UBE4B-204ENST00000462658 C2CD2LO14523 706 aa10.8□□□□□ -0.68
UBE4B-204ENST00000462658 MX2P20592 715 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms