RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 TAS1R3Q7RTX0 852 aa6.66□□□□□ -1.34
CSMD3-205ENST00000462254 CCDC155Q8N6L0 562 aa6.66□□□□□ -1.34
CSMD3-205ENST00000462254 STK32AQ8WU08 396 aa6.66□□□□□ -1.34
CSMD3-205ENST00000462254 NXF1Q9UBU9 619 aaKnown RBP6.66□□□□□ -1.34
CSMD3-205ENST00000462254 MYO5BQ9ULV0 1848 aa6.66□□□□□ -1.34
CSMD3-205ENST00000462254 EFCAB6Q5THR3 1501 aa6.66□□□□□ -1.34
CSMD3-205ENST00000462254 M0R2N6 131 aa6.65□□□□□ -1.34
CSMD3-205ENST00000462254 PPFIA3O75145 1194 aa6.65□□□□□ -1.34
CSMD3-205ENST00000462254 ATG7O95352 703 aa6.65□□□□□ -1.34
CSMD3-205ENST00000462254 B4GALNT3Q6L9W6 998 aa6.65□□□□□ -1.34
CSMD3-205ENST00000462254 SLC9A9Q8IVB4 645 aa6.65□□□□□ -1.34
CSMD3-205ENST00000462254 FAM200AQ8TCP9 573 aa6.65□□□□□ -1.34
CSMD3-205ENST00000462254 RHBDD1Q8TEB9 315 aa6.65□□□□□ -1.34
CSMD3-205ENST00000462254 HINFPQ9BQA5 517 aa6.65□□□□□ -1.34
CSMD3-205ENST00000462254 TSPAN10Q9H1Z9 355 aaPredicted RBP6.65□□□□□ -1.34
CSMD3-205ENST00000462254 RBM19Q9Y4C8 960 aaKnown RBP6.65□□□□□ -1.34
CSMD3-205ENST00000462254 PARP3Q9Y6F1 533 aa6.65□□□□□ -1.34
CSMD3-205ENST00000462254 LMTK2Q8IWU2 1503 aa6.65□□□□□ -1.35
CSMD3-205ENST00000462254 MROH2AA6NES4 1674 aa6.65□□□□□ -1.35
CSMD3-205ENST00000462254 PREX1Q8TCU6 1659 aa6.65□□□□□ -1.35
CSMD3-205ENST00000462254 KIF1BO60333 1816 aa6.64□□□□□ -1.35
CSMD3-205ENST00000462254 C21orf2O43822 256 aa6.64□□□□□ -1.35
CSMD3-205ENST00000462254 ELOAQ14241 798 aaKnown RBP6.64□□□□□ -1.35
CSMD3-205ENST00000462254 GNASQ5JWF2 1037 aa6.64□□□□□ -1.35
CSMD3-205ENST00000462254 CCER1Q8TC90 406 aaPredicted RBP6.64□□□□□ -1.35
CSMD3-205ENST00000462254 TIMMDC1Q9NPL8 285 aa6.64□□□□□ -1.35
CSMD3-205ENST00000462254 CUEDC1Q9NWM3 386 aaPredicted RBP6.64□□□□□ -1.35
CSMD3-205ENST00000462254 NUP155O75694 1391 aa6.64□□□□□ -1.35
CSMD3-205ENST00000462254 ABCC3O15438 1527 aa6.64□□□□□ -1.35
CSMD3-205ENST00000462254 TERTO14746 1132 aaKnown RBP6.63□□□□□ -1.35
CSMD3-205ENST00000462254 KIF3BO15066 747 aa6.63□□□□□ -1.35
CSMD3-205ENST00000462254 C3P01024 1663 aa6.63□□□□□ -1.35
CSMD3-205ENST00000462254 CANXP27824 592 aaKnown RBP6.63□□□□□ -1.35
CSMD3-205ENST00000462254 GTF2E1P29083 439 aaPredicted RBP6.63□□□□□ -1.35
CSMD3-205ENST00000462254 PLA2G4AP47712 749 aa6.63□□□□□ -1.35
CSMD3-205ENST00000462254 WDR44Q5JSH3 913 aa6.63□□□□□ -1.35
CSMD3-205ENST00000462254 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
CSMD3-205ENST00000462254 TMEM164Q5U3C3 297 aa6.63□□□□□ -1.35
CSMD3-205ENST00000462254 ZDHHC1Q8WTX9 485 aa6.63□□□□□ -1.35
CSMD3-205ENST00000462254 NIFKQ9BYG3 293 aaKnown RBP6.63□□□□□ -1.35
CSMD3-205ENST00000462254 CABP1Q9NZU7 370 aa6.63□□□□□ -1.35
CSMD3-205ENST00000462254 ADAMTSL3P82987 1691 aa6.62□□□□□ -1.35
CSMD3-205ENST00000462254 RIMS1Q86UR5 1692 aaKnown RBP6.62□□□□□ -1.35
CSMD3-205ENST00000462254 CLTCL1P53675 1640 aa6.62□□□□□ -1.35
CSMD3-205ENST00000462254 NFX1Q12986 1120 aaKnown RBP6.62□□□□□ -1.35
CSMD3-205ENST00000462254 SH3PXD2AQ5TCZ1 1133 aa6.62□□□□□ -1.35
CSMD3-205ENST00000462254 TXNDC2Q86VQ3 553 aa6.62□□□□□ -1.35
CSMD3-205ENST00000462254 SCG3Q8WXD2 468 aaKnown RBP6.62□□□□□ -1.35
CSMD3-205ENST00000462254 MRRFQ96E11 262 aaKnown RBP6.62□□□□□ -1.35
CSMD3-205ENST00000462254 GAS2L1Q99501 681 aaPredicted RBP6.62□□□□□ -1.35
CSMD3-205ENST00000462254 MPHOSPH9Q99550 1183 aa6.62□□□□□ -1.35
CSMD3-205ENST00000462254 GPAMQ9HCL2 828 aa6.62□□□□□ -1.35
CSMD3-205ENST00000462254 KIAA1522Q9P206 1035 aaPredicted RBP6.62□□□□□ -1.35
CSMD3-205ENST00000462254 DYRK1BQ9Y463 629 aa6.62□□□□□ -1.35
CSMD3-205ENST00000462254 IFT172Q9UG01 1749 aa6.62□□□□□ -1.35
CSMD3-205ENST00000462254 MADDQ8WXG6 1647 aa6.61□□□□□ -1.35
CSMD3-205ENST00000462254 H3BM21 787 aa6.61□□□□□ -1.35
CSMD3-205ENST00000462254 ITGA6P23229 1130 aa6.61□□□□□ -1.35
CSMD3-205ENST00000462254 AIDAQ96BJ3 306 aa6.61□□□□□ -1.35
CSMD3-205ENST00000462254 SLAIN2Q9P270 581 aa6.61□□□□□ -1.35
CSMD3-205ENST00000462254 PIK3C2BO00750 1634 aa6.61□□□□□ -1.35
CSMD3-205ENST00000462254 SYNMO15061 1565 aa6.61□□□□□ -1.35
CSMD3-205ENST00000462254 TRPM2O94759 1503 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 KANK1Q14678 1352 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 ATAD2Q6PL18 1390 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 ERBB4Q15303 1308 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 CLSPNQ9HAW4 1339 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 A0A1B0GTH6 734 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 MSX1P28360 303 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 NOS2P35228 1153 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 TXLNAP40222 546 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 TEAD4Q15561 434 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 GGT6Q6P531 493 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 RIPOR1Q6ZS17 1223 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 L3MBTL2Q969R5 705 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 CHMP4AQ9BY43 222 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 PLA2R1Q13018 1463 aa6.6□□□□□ -1.35
CSMD3-205ENST00000462254 NPATQ14207 1427 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 ANKRD30BQ9BXX2 1392 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 PPP1R12BO60237 982 aaPredicted RBP6.59□□□□□ -1.35
CSMD3-205ENST00000462254 F11P03951 625 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 THBS1P07996 1170 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 ATP4AP20648 1035 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 DBN1Q16643 649 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 LCE2AQ5TA79 106 aaPredicted RBP6.59□□□□□ -1.35
CSMD3-205ENST00000462254 DNAJC14Q6Y2X3 702 aaPredicted RBP6.59□□□□□ -1.35
CSMD3-205ENST00000462254 VWA5B2Q8N398 1253 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 KLRG1Q96E93 195 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 PRIMPOLQ96LW4 560 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 RUBCNLQ9H714 662 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 ZNF232Q9UNY5 417 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 UGGT1Q9NYU2 1555 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 PPLO60437 1756 aa6.59□□□□□ -1.35
CSMD3-205ENST00000462254 RPRD2Q5VT52 1461 aaKnown RBP6.59□□□□□ -1.36
CSMD3-205ENST00000462254 SERTM1A2A2V5 107 aa6.58□□□□□ -1.36
CSMD3-205ENST00000462254 EML1O00423 815 aa6.58□□□□□ -1.36
CSMD3-205ENST00000462254 PRMT3O60678 531 aa6.58□□□□□ -1.36
CSMD3-205ENST00000462254 WEE1P30291 646 aa6.58□□□□□ -1.36
CSMD3-205ENST00000462254 PSMA6P60900 246 aaKnown RBP6.58□□□□□ -1.36
CSMD3-205ENST00000462254 TREML4Q6UXN2 200 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms