RNA–Protein interactions for RNA: ENST00000462247.1

ERCC6-204, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 3

Gene ERCC6, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-204ENST00000462247 VSIG10Q8N0Z9 540 aa15.67■□□□□ 0.1
ERCC6-204ENST00000462247 SLC17A8Q8NDX2 589 aa15.67■□□□□ 0.1
ERCC6-204ENST00000462247 BABAM1Q9NWV8 329 aa15.67■□□□□ 0.1
ERCC6-204ENST00000462247 USP16Q9Y5T5 823 aa15.67■□□□□ 0.1
ERCC6-204ENST00000462247 FAM155AB1AL88 458 aaPredicted RBP15.66■□□□□ 0.1
ERCC6-204ENST00000462247 ELL2O00472 640 aaPredicted RBP15.66■□□□□ 0.1
ERCC6-204ENST00000462247 PIP4K2AP48426 406 aaPredicted RBP15.66■□□□□ 0.1
ERCC6-204ENST00000462247 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
ERCC6-204ENST00000462247 DUSP27Q5VZP5 1158 aa15.66■□□□□ 0.1
ERCC6-204ENST00000462247 CCDC102AQ96A19 550 aa15.66■□□□□ 0.1
ERCC6-204ENST00000462247 FMNL2Q96PY5 1086 aa15.66■□□□□ 0.1
ERCC6-204ENST00000462247 GPRC5DQ9NZD1 345 aa15.66■□□□□ 0.1
ERCC6-204ENST00000462247 COL4A5P29400 1685 aa15.65■□□□□ 0.1
ERCC6-204ENST00000462247 EXOSC9Q06265 439 aaKnown RBP15.65■□□□□ 0.1
ERCC6-204ENST00000462247 CDC37L1Q7L3B6 337 aa15.65■□□□□ 0.1
ERCC6-204ENST00000462247 LARGE2Q8N3Y3 721 aa15.65■□□□□ 0.1
ERCC6-204ENST00000462247 PGAP2Q9UHJ9 254 aa15.65■□□□□ 0.1
ERCC6-204ENST00000462247 HDAC9Q9UKV0 1011 aa15.65■□□□□ 0.1
ERCC6-204ENST00000462247 ALDH1B1P30837 517 aa15.64■□□□□ 0.09
ERCC6-204ENST00000462247 NBPF5PQ86XG9 351 aaPredicted RBP15.64■□□□□ 0.09
ERCC6-204ENST00000462247 NECTIN2Q92692 538 aa15.64■□□□□ 0.09
ERCC6-204ENST00000462247 TRIOBPQ9H2D6 2365 aa15.64■□□□□ 0.09
ERCC6-204ENST00000462247 KLRG2A4D1S0 409 aaPredicted RBP15.63■□□□□ 0.09
ERCC6-204ENST00000462247 E9PSI1 815 aa15.63■□□□□ 0.09
ERCC6-204ENST00000462247 NPM2Q86SE8 214 aaKnown RBP15.63■□□□□ 0.09
ERCC6-204ENST00000462247 ZC3H15Q8WU90 426 aaKnown RBP15.63■□□□□ 0.09
ERCC6-204ENST00000462247 A1BGP04217 495 aa15.62■□□□□ 0.09
ERCC6-204ENST00000462247 SNRPA1P09661 255 aaKnown RBP15.62■□□□□ 0.09
ERCC6-204ENST00000462247 ZNF157P51786 506 aaPredicted RBP15.62■□□□□ 0.09
ERCC6-204ENST00000462247 PROSER3Q2NL68 480 aa15.62■□□□□ 0.09
ERCC6-204ENST00000462247 CSRNP1Q96S65 589 aa15.62■□□□□ 0.09
ERCC6-204ENST00000462247 CEP290O15078 2479 aa15.61■□□□□ 0.09
ERCC6-204ENST00000462247 NBPF26B4DH59 902 aa15.61■□□□□ 0.09
ERCC6-204ENST00000462247 TCERG1O14776 1098 aaKnown RBP15.61■□□□□ 0.09
ERCC6-204ENST00000462247 CAMTA2O94983 1202 aa15.61■□□□□ 0.09
ERCC6-204ENST00000462247 ANXA1P04083 346 aa15.61■□□□□ 0.09
ERCC6-204ENST00000462247 IL6STP40189 918 aaPredicted RBP15.61■□□□□ 0.09
ERCC6-204ENST00000462247 NBPF10Q6P3W6 841 aaKnown RBP15.61■□□□□ 0.09
ERCC6-204ENST00000462247 COLQQ9Y215 455 aaPredicted RBP15.61■□□□□ 0.09
ERCC6-204ENST00000462247 SNED1Q8TER0 1413 aa15.6■□□□□ 0.09
ERCC6-204ENST00000462247 EIF2S2P20042 333 aaKnown RBP15.6■□□□□ 0.09
ERCC6-204ENST00000462247 CC2D2BQ6DHV5 1058 aa15.6■□□□□ 0.09
ERCC6-204ENST00000462247 USP48Q86UV5 1035 aa15.6■□□□□ 0.09
ERCC6-204ENST00000462247 NIM1KQ8IY84 436 aa15.6■□□□□ 0.09
ERCC6-204ENST00000462247 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
ERCC6-204ENST00000462247 VAMP4O75379 141 aa15.59■□□□□ 0.09
ERCC6-204ENST00000462247 PDIA6Q15084 440 aa15.59■□□□□ 0.09
ERCC6-204ENST00000462247 TWISTNBQ3B726 338 aaPredicted RBP15.59■□□□□ 0.09
ERCC6-204ENST00000462247 FBXO46Q6PJ61 603 aaPredicted RBP15.59■□□□□ 0.09
ERCC6-204ENST00000462247 TPTE2Q6XPS3 522 aa15.59■□□□□ 0.09
ERCC6-204ENST00000462247 LRP10Q7Z4F1 713 aa15.59■□□□□ 0.09
ERCC6-204ENST00000462247 C2orf69Q8N8R5 385 aa15.59■□□□□ 0.09
ERCC6-204ENST00000462247 GMPSP49915 693 aaPredicted RBP15.58■□□□□ 0.08
ERCC6-204ENST00000462247 HIRAP54198 1017 aaPredicted RBP15.58■□□□□ 0.08
ERCC6-204ENST00000462247 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
ERCC6-204ENST00000462247 ZNF296Q8WUU4 475 aaPredicted RBP15.58■□□□□ 0.08
ERCC6-204ENST00000462247 GBA2Q9HCG7 927 aaPredicted RBP15.58■□□□□ 0.08
ERCC6-204ENST00000462247 DLK2Q6UY11 383 aa15.57■□□□□ 0.08
ERCC6-204ENST00000462247 TEX13AQ9BXU3 409 aaPredicted RBP15.57■□□□□ 0.08
ERCC6-204ENST00000462247 CHPF2Q9P2E5 772 aa15.57■□□□□ 0.08
ERCC6-204ENST00000462247 SLC10A3P09131 477 aa15.56■□□□□ 0.08
ERCC6-204ENST00000462247 GRIPAP1Q4V328 841 aa15.56■□□□□ 0.08
ERCC6-204ENST00000462247 HDGFL1Q5TGJ6 251 aa15.56■□□□□ 0.08
ERCC6-204ENST00000462247 DZIP3Q86Y13 1208 aaKnown RBP15.56■□□□□ 0.08
ERCC6-204ENST00000462247 PPIP5K2O43314 1243 aa15.55■□□□□ 0.08
ERCC6-204ENST00000462247 HOXB7P09629 217 aa15.55■□□□□ 0.08
ERCC6-204ENST00000462247 CXCL9Q07325 125 aa15.55■□□□□ 0.08
ERCC6-204ENST00000462247 TRPM4Q8TD43 1214 aa15.55■□□□□ 0.08
ERCC6-204ENST00000462247 BCL2L13Q9BXK5 485 aa15.55■□□□□ 0.08
ERCC6-204ENST00000462247 COL6A3P12111 3177 aa15.54■□□□□ 0.08
ERCC6-204ENST00000462247 CDHR2Q9BYE9 1310 aa15.54■□□□□ 0.08
ERCC6-204ENST00000462247 MYL6BP14649 208 aa15.54■□□□□ 0.08
ERCC6-204ENST00000462247 CLEC4GQ6UXB4 293 aa15.54■□□□□ 0.08
ERCC6-204ENST00000462247 G2E3Q7L622 706 aa15.54■□□□□ 0.08
ERCC6-204ENST00000462247 KIAA0100Q14667 2235 aaKnown RBP15.53■□□□□ 0.08
ERCC6-204ENST00000462247 POTEFA5A3E0 1075 aa15.53■□□□□ 0.08
ERCC6-204ENST00000462247 FAM177BA6PVY3 158 aa15.53■□□□□ 0.08
ERCC6-204ENST00000462247 TBC1D8O95759 1140 aa15.53■□□□□ 0.08
ERCC6-204ENST00000462247 PHAXQ9H814 394 aaKnown RBP15.53■□□□□ 0.08
ERCC6-204ENST00000462247 ZNRF3Q9ULT6 936 aa15.53■□□□□ 0.08
ERCC6-204ENST00000462247 ZNF652Q9Y2D9 606 aa15.53■□□□□ 0.08
ERCC6-204ENST00000462247 GTF2E1P29083 439 aaPredicted RBP15.52■□□□□ 0.08
ERCC6-204ENST00000462247 AOC3Q16853 763 aa15.52■□□□□ 0.08
ERCC6-204ENST00000462247 INTS3Q68E01 1043 aaKnown RBP15.52■□□□□ 0.08
ERCC6-204ENST00000462247 TTLL7Q6ZT98 887 aa15.52■□□□□ 0.08
ERCC6-204ENST00000462247 KRT26Q7Z3Y9 468 aa15.52■□□□□ 0.08
ERCC6-204ENST00000462247 NIP7Q9Y221 180 aaKnown RBP eCLIP15.52■□□□□ 0.08
ERCC6-204ENST00000462247 CACNA1FO60840 1977 aa15.51■□□□□ 0.07
ERCC6-204ENST00000462247 SSH1Q8WYL5 1049 aa15.51■□□□□ 0.07
ERCC6-204ENST00000462247 CNOT7Q9UIV1 285 aaKnown RBP15.51■□□□□ 0.07
ERCC6-204ENST00000462247 NUP98P52948 1817 aa15.51■□□□□ 0.07
ERCC6-204ENST00000462247 CENPFP49454 3210 aa15.51■□□□□ 0.07
ERCC6-204ENST00000462247 POLR2AP24928 1970 aaKnown RBP15.51■□□□□ 0.07
ERCC6-204ENST00000462247 H7C1D1 291 aa15.5■□□□□ 0.07
ERCC6-204ENST00000462247 CRY2Q49AN0 593 aa15.5■□□□□ 0.07
ERCC6-204ENST00000462247 VPS33BQ9H267 617 aa15.5■□□□□ 0.07
ERCC6-204ENST00000462247 ERBB4Q15303 1308 aa15.49■□□□□ 0.07
ERCC6-204ENST00000462247 GPR25O00155 361 aa15.49■□□□□ 0.07
ERCC6-204ENST00000462247 RARSP54136 660 aaKnown RBP15.49■□□□□ 0.07
ERCC6-204ENST00000462247 TNIP1Q15025 636 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms