RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CAPN12Q6ZSI9 719 aa7.91□□□□□ -1.14
COPS3-204ENST00000462236 ABTB2Q8N961 1025 aa7.91□□□□□ -1.14
COPS3-204ENST00000462236 C7orf43Q8WVR3 580 aa7.91□□□□□ -1.14
COPS3-204ENST00000462236 AIDAQ96BJ3 306 aa7.91□□□□□ -1.14
COPS3-204ENST00000462236 STIM2Q9P246 746 aa7.91□□□□□ -1.14
COPS3-204ENST00000462236 ANKIB1Q9P2G1 1089 aa7.91□□□□□ -1.14
COPS3-204ENST00000462236 DACH1Q9UI36 760 aa7.91□□□□□ -1.14
COPS3-204ENST00000462236 DNMT3AQ9Y6K1 912 aaPredicted RBP7.91□□□□□ -1.14
COPS3-204ENST00000462236 SAMD9LQ8IVG5 1584 aa7.91□□□□□ -1.14
COPS3-204ENST00000462236 DNMT1P26358 1616 aaKnown RBP7.91□□□□□ -1.14
COPS3-204ENST00000462236 EEA1Q15075 1411 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 UBAP1LF5GYI3 381 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 ABL1P00519 1130 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 F11P03951 625 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 MSX1P28360 303 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 SCNN1AP37088 669 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 TXLNAP40222 546 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 NAA30Q147X3 362 aaPredicted RBP7.9□□□□□ -1.14
COPS3-204ENST00000462236 SH3PXD2AQ5TCZ1 1133 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 ALKBH2Q6NS38 261 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 RHPN1Q8TCX5 695 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 GMCL1Q96IK5 515 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 NGLY1Q96IV0 654 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 CRISPLD1Q9H336 500 aa7.9□□□□□ -1.14
COPS3-204ENST00000462236 INO80Q9ULG1 1556 aaPredicted RBP7.89□□□□□ -1.15
COPS3-204ENST00000462236 CPS1P31327 1500 aa7.89□□□□□ -1.15
COPS3-204ENST00000462236 PTPRKQ15262 1439 aa7.89□□□□□ -1.15
COPS3-204ENST00000462236 ZMYM3Q14202 1370 aa7.89□□□□□ -1.15
COPS3-204ENST00000462236 ATP4AP20648 1035 aa7.89□□□□□ -1.15
COPS3-204ENST00000462236 TMCO4Q5TGY1 634 aa7.89□□□□□ -1.15
COPS3-204ENST00000462236 IER5Q5VY09 327 aa7.89□□□□□ -1.15
COPS3-204ENST00000462236 NLRP8Q86W28 1048 aa7.89□□□□□ -1.15
COPS3-204ENST00000462236 GLYCTKQ8IVS8 523 aa7.89□□□□□ -1.15
COPS3-204ENST00000462236 SAP130Q9H0E3 1048 aa7.89□□□□□ -1.15
COPS3-204ENST00000462236 ARHGAP35Q9NRY4 1499 aa7.88□□□□□ -1.15
COPS3-204ENST00000462236 FMN1Q68DA7 1419 aa7.88□□□□□ -1.15
COPS3-204ENST00000462236 XIRP1Q702N8 1843 aaKnown RBP7.88□□□□□ -1.15
COPS3-204ENST00000462236 SLC35F4A4IF30 521 aa7.88□□□□□ -1.15
COPS3-204ENST00000462236 TNFRSF10BO14763 440 aa7.88□□□□□ -1.15
COPS3-204ENST00000462236 RHOQP17081 205 aa7.88□□□□□ -1.15
COPS3-204ENST00000462236 HSPA1LP34931 641 aa7.88□□□□□ -1.15
COPS3-204ENST00000462236 PGBD3Q8N328 593 aa7.88□□□□□ -1.15
COPS3-204ENST00000462236 LRFN2Q9ULH4 789 aa7.88□□□□□ -1.15
COPS3-204ENST00000462236 CCDC9Q9Y3X0 531 aaKnown RBP7.88□□□□□ -1.15
COPS3-204ENST00000462236 ADGBQ8N7X0 1667 aa7.88□□□□□ -1.15
COPS3-204ENST00000462236 VWDEQ8N2E2 1590 aa7.88□□□□□ -1.15
COPS3-204ENST00000462236 SENP3-EIF4A1A0A087X0R7 540 aa7.87□□□□□ -1.15
COPS3-204ENST00000462236 H3BRB1 525 aa7.87□□□□□ -1.15
COPS3-204ENST00000462236 TGFBR3LH3BV60 316 aa7.87□□□□□ -1.15
COPS3-204ENST00000462236 PTSQ03393 145 aa7.87□□□□□ -1.15
COPS3-204ENST00000462236 ZNF211Q13398 564 aaPredicted RBP7.87□□□□□ -1.15
COPS3-204ENST00000462236 BICDL1Q6ZP65 573 aa7.87□□□□□ -1.15
COPS3-204ENST00000462236 ZIC5Q96T25 663 aa7.87□□□□□ -1.15
COPS3-204ENST00000462236 TUT1Q9H6E5 874 aaKnown RBP7.87□□□□□ -1.15
COPS3-204ENST00000462236 NEUROD4Q9HD90 331 aa7.87□□□□□ -1.15
COPS3-204ENST00000462236 FAM13BQ9NYF5 915 aa7.87□□□□□ -1.15
COPS3-204ENST00000462236 PODXL2Q9NZ53 605 aa7.87□□□□□ -1.15
COPS3-204ENST00000462236 GMPR2Q9P2T1 348 aaKnown RBP7.87□□□□□ -1.15
COPS3-204ENST00000462236 A2ML1A8K2U0 1454 aa7.87□□□□□ -1.15
COPS3-204ENST00000462236 DEPDC5O75140 1603 aa7.86□□□□□ -1.15
COPS3-204ENST00000462236 H7C1W4 665 aa7.86□□□□□ -1.15
COPS3-204ENST00000462236 DGKZQ13574 1117 aa7.86□□□□□ -1.15
COPS3-204ENST00000462236 NOM1Q5C9Z4 860 aaKnown RBP7.86□□□□□ -1.15
COPS3-204ENST00000462236 ARSJQ5FYB0 599 aaPredicted RBP7.86□□□□□ -1.15
COPS3-204ENST00000462236 SAMD5Q5TGI4 173 aa7.86□□□□□ -1.15
COPS3-204ENST00000462236 IFT43Q96FT9 208 aa7.86□□□□□ -1.15
COPS3-204ENST00000462236 ATP7AQ04656 1500 aa7.86□□□□□ -1.15
COPS3-204ENST00000462236 ECM1Q16610 540 aa7.85□□□□□ -1.15
COPS3-204ENST00000462236 CCDC27Q2M243 656 aa7.85□□□□□ -1.15
COPS3-204ENST00000462236 EFHC2Q5JST6 749 aa7.85□□□□□ -1.15
COPS3-204ENST00000462236 SUSD3Q96L08 255 aa7.85□□□□□ -1.15
COPS3-204ENST00000462236 CITED4Q96RK1 184 aa7.85□□□□□ -1.15
COPS3-204ENST00000462236 SHANK2Q9UPX8 1470 aa7.85□□□□□ -1.15
COPS3-204ENST00000462236 CLIP1P30622 1438 aa7.85□□□□□ -1.15
COPS3-204ENST00000462236 SYCP2Q9BX26 1530 aa7.84□□□□□ -1.15
COPS3-204ENST00000462236 CFAP65Q6ZU64 1925 aaKnown RBP7.84□□□□□ -1.15
COPS3-204ENST00000462236 A0A1W2PNR3 127 aa7.84□□□□□ -1.15
COPS3-204ENST00000462236 C11orf95C9JLR9 678 aaPredicted RBP7.84□□□□□ -1.15
COPS3-204ENST00000462236 ERCC3P19447 782 aa7.84□□□□□ -1.15
COPS3-204ENST00000462236 ARHGAP4P98171 946 aa7.84□□□□□ -1.15
COPS3-204ENST00000462236 FIGNL1Q6PIW4 674 aa7.84□□□□□ -1.15
COPS3-204ENST00000462236 C11orf16Q9NQ32 467 aa7.84□□□□□ -1.15
COPS3-204ENST00000462236 BIN2Q9UBW5 565 aaPredicted RBP7.84□□□□□ -1.15
COPS3-204ENST00000462236 CDK11AQ9UQ88 783 aaPredicted RBP7.84□□□□□ -1.15
COPS3-204ENST00000462236 ZC3H13Q5T200 1668 aaKnown RBP7.83□□□□□ -1.16
COPS3-204ENST00000462236 MED14O60244 1454 aa7.83□□□□□ -1.16
COPS3-204ENST00000462236 LCE2BO14633 110 aa7.83□□□□□ -1.16
COPS3-204ENST00000462236 RPLP1P05386 114 aaKnown RBP7.83□□□□□ -1.16
COPS3-204ENST00000462236 MPSTP25325 297 aa7.83□□□□□ -1.16
COPS3-204ENST00000462236 TRIM22Q8IYM9 498 aa7.83□□□□□ -1.16
COPS3-204ENST00000462236 CCDC155Q8N6L0 562 aa7.83□□□□□ -1.16
COPS3-204ENST00000462236 GAS2L1Q99501 681 aaPredicted RBP7.83□□□□□ -1.16
COPS3-204ENST00000462236 ANO2Q9NQ90 1003 aa7.83□□□□□ -1.16
COPS3-204ENST00000462236 KLK14Q9P0G3 267 aa7.83□□□□□ -1.16
COPS3-204ENST00000462236 GJA3Q9Y6H8 435 aa7.83□□□□□ -1.16
COPS3-204ENST00000462236 IQGAP1P46940 1657 aa7.83□□□□□ -1.16
COPS3-204ENST00000462236 A2MP01023 1474 aa7.82□□□□□ -1.16
COPS3-204ENST00000462236 RNF17Q9BXT8 1623 aaKnown RBP7.82□□□□□ -1.16
COPS3-204ENST00000462236 SYNMO15061 1565 aa7.82□□□□□ -1.16
COPS3-204ENST00000462236 TOM1O60784 492 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms