RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 TOM1L2Q6ZVM7 507 aa9.53□□□□□ -0.88
NUP50-212ENST00000461194 GLMNQ92990 594 aa9.53□□□□□ -0.88
NUP50-212ENST00000461194 CRB1P82279 1406 aa9.53□□□□□ -0.88
NUP50-212ENST00000461194 USP54Q70EL1 1684 aa9.52□□□□□ -0.89
NUP50-212ENST00000461194 CSB-PGBD3P0DP91 1061 aa9.52□□□□□ -0.89
NUP50-212ENST00000461194 SOX11P35716 441 aa9.52□□□□□ -0.89
NUP50-212ENST00000461194 MCCD1P59942 119 aaPredicted RBP9.52□□□□□ -0.89
NUP50-212ENST00000461194 TRMT44Q8IYL2 757 aaKnown RBP9.52□□□□□ -0.89
NUP50-212ENST00000461194 ADAMTS19Q8TE59 1207 aa9.52□□□□□ -0.89
NUP50-212ENST00000461194 CARD10Q9BWT7 1032 aa9.52□□□□□ -0.89
NUP50-212ENST00000461194 CEP126Q9P2H0 1117 aa9.52□□□□□ -0.89
NUP50-212ENST00000461194 ABCC6O95255 1503 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 COL18A1P39060 1754 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 TTC24A2A3L6 582 aaPredicted RBP9.51□□□□□ -0.89
NUP50-212ENST00000461194 GDF9O60383 454 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 ALDH1A1P00352 501 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 VASH1Q7L8A9 365 aaPredicted RBP9.51□□□□□ -0.89
NUP50-212ENST00000461194 CYP4X1Q8N118 509 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 IP6K1Q92551 441 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 ZNF592Q92610 1267 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 POLR3GLQ9BT43 218 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 GGNBP2Q9H3C7 697 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 TLL2Q9Y6L7 1015 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 THSD7AQ9UPZ6 1657 aa9.51□□□□□ -0.89
NUP50-212ENST00000461194 BLMP54132 1417 aaPredicted RBP9.5□□□□□ -0.89
NUP50-212ENST00000461194 NSD3Q9BZ95 1437 aa9.5□□□□□ -0.89
NUP50-212ENST00000461194 C11orf95C9JLR9 678 aaPredicted RBP9.5□□□□□ -0.89
NUP50-212ENST00000461194 PDE3BQ13370 1112 aa9.5□□□□□ -0.89
NUP50-212ENST00000461194 TRIM67Q6ZTA4 783 aa9.5□□□□□ -0.89
NUP50-212ENST00000461194 SNIP1Q8TAD8 396 aaKnown RBP9.5□□□□□ -0.89
NUP50-212ENST00000461194 KCTD15Q96SI1 283 aaPredicted RBP9.5□□□□□ -0.89
NUP50-212ENST00000461194 CDCA7Q9BWT1 371 aaPredicted RBP9.5□□□□□ -0.89
NUP50-212ENST00000461194 MAP3K19Q56UN5 1328 aa9.5□□□□□ -0.89
NUP50-212ENST00000461194 EP400Q96L91 3159 aa9.5□□□□□ -0.89
NUP50-212ENST00000461194 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
NUP50-212ENST00000461194 FBLN1P23142 703 aa9.49□□□□□ -0.89
NUP50-212ENST00000461194 RAB15P59190 212 aa9.49□□□□□ -0.89
NUP50-212ENST00000461194 SF3B2Q13435 895 aaKnown RBP9.49□□□□□ -0.89
NUP50-212ENST00000461194 FAM182BQ5T319 152 aa9.49□□□□□ -0.89
NUP50-212ENST00000461194 FAM196AQ6ZSG2 479 aa9.49□□□□□ -0.89
NUP50-212ENST00000461194 ANKRD24Q8TF21 1146 aa9.49□□□□□ -0.89
NUP50-212ENST00000461194 CDK15Q96Q40 435 aa9.49□□□□□ -0.89
NUP50-212ENST00000461194 C1orf115Q9H7X2 142 aa9.49□□□□□ -0.89
NUP50-212ENST00000461194 PDZRN3Q9UPQ7 1066 aa9.49□□□□□ -0.89
NUP50-212ENST00000461194 CCDC7Q96M83 1385 aa9.49□□□□□ -0.89
NUP50-212ENST00000461194 BRWD3Q6RI45 1802 aa9.48□□□□□ -0.89
NUP50-212ENST00000461194 HOXC9P31274 260 aa9.48□□□□□ -0.89
NUP50-212ENST00000461194 GRM5P41594 1212 aa9.48□□□□□ -0.89
NUP50-212ENST00000461194 AMPHP49418 695 aa9.48□□□□□ -0.89
NUP50-212ENST00000461194 PANK3Q9H999 370 aa9.48□□□□□ -0.89
NUP50-212ENST00000461194 CDV3Q9UKY7 258 aaKnown RBP9.48□□□□□ -0.89
NUP50-212ENST00000461194 CGNL1Q0VF96 1302 aa9.48□□□□□ -0.89
NUP50-212ENST00000461194 J3QL48 77 aa9.47□□□□□ -0.89
NUP50-212ENST00000461194 RRS1Q15050 365 aaKnown RBP9.47□□□□□ -0.89
NUP50-212ENST00000461194 DDB1Q16531 1140 aa9.47□□□□□ -0.89
NUP50-212ENST00000461194 NBPF20Q3BBV1 942 aa9.47□□□□□ -0.89
NUP50-212ENST00000461194 SLFNL1Q499Z3 407 aa9.47□□□□□ -0.89
NUP50-212ENST00000461194 DEFB132Q7Z7B7 95 aa9.47□□□□□ -0.89
NUP50-212ENST00000461194 MPNDQ8N594 471 aa9.47□□□□□ -0.89
NUP50-212ENST00000461194 NLRP2Q9NX02 1062 aa9.47□□□□□ -0.89
NUP50-212ENST00000461194 MYOM1P52179 1685 aa9.47□□□□□ -0.89
NUP50-212ENST00000461194 RTL1A6NKG5 1358 aa9.47□□□□□ -0.89
NUP50-212ENST00000461194 DISP2A7MBM2 1401 aa9.47□□□□□ -0.89
NUP50-212ENST00000461194 TOR4AQ9NXH8 423 aa9.46□□□□□ -0.9
NUP50-212ENST00000461194 MAP4K5Q9Y4K4 846 aa9.46□□□□□ -0.9
NUP50-212ENST00000461194 WASF2Q9Y6W5 498 aa9.46□□□□□ -0.9
NUP50-212ENST00000461194 KIF7Q2M1P5 1343 aa9.46□□□□□ -0.9
NUP50-212ENST00000461194 KIF24Q5T7B8 1368 aa9.46□□□□□ -0.9
NUP50-212ENST00000461194 EXOC5O00471 708 aa9.45□□□□□ -0.9
NUP50-212ENST00000461194 TRIM37O94972 964 aa9.45□□□□□ -0.9
NUP50-212ENST00000461194 ADH1CP00326 375 aa9.45□□□□□ -0.9
NUP50-212ENST00000461194 BAG6P46379 1132 aa9.45□□□□□ -0.9
NUP50-212ENST00000461194 PRR20EP86478 221 aa9.45□□□□□ -0.9
NUP50-212ENST00000461194 PRR20CP86479 221 aa9.45□□□□□ -0.9
NUP50-212ENST00000461194 PRR20DP86480 221 aa9.45□□□□□ -0.9
NUP50-212ENST00000461194 PRR20BP86481 221 aa9.45□□□□□ -0.9
NUP50-212ENST00000461194 PRR20AP86496 221 aa9.45□□□□□ -0.9
NUP50-212ENST00000461194 LTV1Q96GA3 475 aaPredicted RBP9.45□□□□□ -0.9
NUP50-212ENST00000461194 PIK3CDO00329 1044 aa9.44□□□□□ -0.9
NUP50-212ENST00000461194 IL2RBP14784 551 aa9.44□□□□□ -0.9
NUP50-212ENST00000461194 FSHRP23945 695 aa9.44□□□□□ -0.9
NUP50-212ENST00000461194 TSGA10IPQ3SY00 556 aa9.44□□□□□ -0.9
NUP50-212ENST00000461194 HSP90AB2PQ58FF8 381 aa9.44□□□□□ -0.9
NUP50-212ENST00000461194 RNF135Q8IUD6 432 aa9.44□□□□□ -0.9
NUP50-212ENST00000461194 MARCH10Q8NA82 808 aaPredicted RBP9.44□□□□□ -0.9
NUP50-212ENST00000461194 PARP4Q9UKK3 1724 aaKnown RBP9.43□□□□□ -0.9
NUP50-212ENST00000461194 OVOS2A0A0G2JMS6 1433 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 BCL9O00512 1426 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 NSD2O96028 1365 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 INSRP06213 1382 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 FLT4P35916 1363 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 ESPNB1AK53 854 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 GFRA3O60609 400 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 PHTF2Q8N3S3 785 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 CCDC97Q96F63 343 aaPredicted RBP9.43□□□□□ -0.9
NUP50-212ENST00000461194 ARID3AQ99856 593 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
NUP50-212ENST00000461194 EMILIN1Q9Y6C2 1016 aa9.43□□□□□ -0.9
NUP50-212ENST00000461194 LTN1O94822 1766 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms