RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
NUP98-208ENST00000461047 QTRT2Q9H974 415 aaKnown RBP7.87□□□□□ -1.15
NUP98-208ENST00000461047 THRAP3Q9Y2W1 955 aaKnown RBP7.87□□□□□ -1.15
NUP98-208ENST00000461047 U2AF1L5P0DN76 240 aaPredicted RBP7.86□□□□□ -1.15
NUP98-208ENST00000461047 WDR4P57081 412 aaKnown RBP7.86□□□□□ -1.15
NUP98-208ENST00000461047 U2AF1Q01081 240 aaKnown RBP eCLIP7.86□□□□□ -1.15
NUP98-208ENST00000461047 PNMA1Q8ND90 353 aa7.86□□□□□ -1.15
NUP98-208ENST00000461047 KIF20BQ96Q89 1820 aa7.86□□□□□ -1.15
NUP98-208ENST00000461047 NFAT5O94916 1531 aa7.85□□□□□ -1.15
NUP98-208ENST00000461047 ABCC6O95255 1503 aa7.85□□□□□ -1.15
NUP98-208ENST00000461047 BMP1P13497 986 aa7.85□□□□□ -1.15
NUP98-208ENST00000461047 TATP17735 454 aaPredicted RBP7.85□□□□□ -1.15
NUP98-208ENST00000461047 IL13P35225 146 aa7.85□□□□□ -1.15
NUP98-208ENST00000461047 NR5A1Q13285 461 aa7.85□□□□□ -1.15
NUP98-208ENST00000461047 EIF4A2Q14240 407 aaKnown RBP7.85□□□□□ -1.15
NUP98-208ENST00000461047 PPP2R2DQ66LE6 453 aa7.85□□□□□ -1.15
NUP98-208ENST00000461047 TCP11L2Q8N4U5 519 aa7.85□□□□□ -1.15
NUP98-208ENST00000461047 PCMTD1Q96MG8 357 aaPredicted RBP7.85□□□□□ -1.15
NUP98-208ENST00000461047 CDK15Q96Q40 435 aa7.85□□□□□ -1.15
NUP98-208ENST00000461047 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.85□□□□□ -1.15
NUP98-208ENST00000461047 CDK12Q9NYV4 1490 aaPredicted RBP7.85□□□□□ -1.15
NUP98-208ENST00000461047 USP54Q70EL1 1684 aa7.84□□□□□ -1.15
NUP98-208ENST00000461047 SNRPBP14678 240 aaKnown RBP7.84□□□□□ -1.15
NUP98-208ENST00000461047 RXRBP28702 533 aa7.84□□□□□ -1.15
NUP98-208ENST00000461047 RBM6P78332 1123 aaKnown RBP7.84□□□□□ -1.15
NUP98-208ENST00000461047 SCARF1Q14162 830 aa7.84□□□□□ -1.15
NUP98-208ENST00000461047 AMOTQ4VCS5 1084 aa7.84□□□□□ -1.15
NUP98-208ENST00000461047 PLEKHO1Q53GL0 409 aaPredicted RBP7.84□□□□□ -1.15
NUP98-208ENST00000461047 LARP1Q6PKG0 1096 aaKnown RBP7.84□□□□□ -1.15
NUP98-208ENST00000461047 LRRN4Q8WUT4 740 aa7.84□□□□□ -1.15
NUP98-208ENST00000461047 GJD4Q96KN9 370 aaPredicted RBP7.84□□□□□ -1.15
NUP98-208ENST00000461047 USP35Q9P2H5 1018 aa7.84□□□□□ -1.15
NUP98-208ENST00000461047 SPG7Q9UQ90 795 aa7.84□□□□□ -1.15
NUP98-208ENST00000461047 CRB1P82279 1406 aa7.84□□□□□ -1.15
NUP98-208ENST00000461047 COL14A1Q05707 1796 aaKnown RBP7.84□□□□□ -1.15
NUP98-208ENST00000461047 ANKRD26Q9UPS8 1709 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 SPATA31A5Q5VU36 1347 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 SPATA31A7Q8IWB4 1347 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 MAPK8IP3Q9UPT6 1336 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 EXOC5O00471 708 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 IL2RBP14784 551 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 NBPF6Q5VWK0 638 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 SULT6B1Q6IMI4 303 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 VASH1Q7L8A9 365 aaPredicted RBP7.83□□□□□ -1.16
NUP98-208ENST00000461047 NBPF4Q96M43 638 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 FKBPLQ9UIM3 349 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 SLIT2O94813 1529 aa7.83□□□□□ -1.16
NUP98-208ENST00000461047 SPATA31A1Q5TZJ5 1347 aa7.82□□□□□ -1.16
NUP98-208ENST00000461047 LRP6O75581 1613 aa7.82□□□□□ -1.16
NUP98-208ENST00000461047 PHRF1Q9P1Y6 1649 aaKnown RBP7.82□□□□□ -1.16
NUP98-208ENST00000461047 PDE3BQ13370 1112 aa7.82□□□□□ -1.16
NUP98-208ENST00000461047 NR6A1Q15406 480 aa7.82□□□□□ -1.16
NUP98-208ENST00000461047 TREML4Q6UXN2 200 aa7.82□□□□□ -1.16
NUP98-208ENST00000461047 SH3BP5LQ7L8J4 393 aa7.82□□□□□ -1.16
NUP98-208ENST00000461047 SH3RF1Q7Z6J0 888 aa7.82□□□□□ -1.16
NUP98-208ENST00000461047 FAM9BQ8IZU0 186 aa7.82□□□□□ -1.16
NUP98-208ENST00000461047 ARHGAP9Q9BRR9 750 aa7.82□□□□□ -1.16
NUP98-208ENST00000461047 COL5A2P05997 1499 aaPredicted RBP7.81□□□□□ -1.16
NUP98-208ENST00000461047 IGSF1Q8N6C5 1336 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 ZC3H4Q9UPT8 1303 aaKnown RBP7.81□□□□□ -1.16
NUP98-208ENST00000461047 WFS1O76024 890 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 ZIC2O95409 532 aaPredicted RBP7.81□□□□□ -1.16
NUP98-208ENST00000461047 HMOX1P09601 288 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 TIMP2P16035 220 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 FSHRP23945 695 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 DDB1Q16531 1140 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 PDXDC2PQ6P474 469 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 ZBTB33Q86T24 672 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 IL27Q8NEV9 243 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 GAS2L2Q8NHY3 880 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 ZCRB1Q8TBF4 217 aaKnown RBP7.81□□□□□ -1.16
NUP98-208ENST00000461047 PNISRQ8TF01 805 aaKnown RBP7.81□□□□□ -1.16
NUP98-208ENST00000461047 GOPCQ9HD26 462 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 CAMTA1Q9Y6Y1 1673 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 PLEKHG2Q9H7P9 1386 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 BCL9LQ86UU0 1499 aa7.81□□□□□ -1.16
NUP98-208ENST00000461047 UPP2O95045 317 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 HSP90AB1P08238 724 aaKnown RBP7.8□□□□□ -1.16
NUP98-208ENST00000461047 PRKAR2BP31323 418 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 PTK2Q05397 1052 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 C1orf141Q5JVX7 400 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 MRPL14Q6P1L8 145 aaKnown RBP7.8□□□□□ -1.16
NUP98-208ENST00000461047 NGEFQ8N5V2 710 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 USHBP1Q8N6Y0 703 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 RUNDC1Q96C34 613 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 SLC10A4Q96EP9 437 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 C1QTNF2Q9BXJ5 285 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 ADAMTS8Q9UP79 889 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 MAP4K5Q9Y4K4 846 aa7.8□□□□□ -1.16
NUP98-208ENST00000461047 USP17L8P0C7I0 530 aa7.79□□□□□ -1.16
NUP98-208ENST00000461047 RFC5P40937 340 aa7.79□□□□□ -1.16
NUP98-208ENST00000461047 GRM5P41594 1212 aa7.79□□□□□ -1.16
NUP98-208ENST00000461047 LMOD3Q0VAK6 560 aa7.79□□□□□ -1.16
NUP98-208ENST00000461047 TRMT44Q8IYL2 757 aaKnown RBP7.79□□□□□ -1.16
NUP98-208ENST00000461047 RTF1Q92541 710 aaKnown RBP7.79□□□□□ -1.16
NUP98-208ENST00000461047 ZFP42Q96MM3 310 aa7.79□□□□□ -1.16
NUP98-208ENST00000461047 CDV3Q9UKY7 258 aaKnown RBP7.79□□□□□ -1.16
NUP98-208ENST00000461047 ATRNO75882 1429 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms