RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SFI1A8K8P3 1242 aa7.55□□□□□ -1.2
ATPAF1-203ENST00000460928 PPP1R12BO60237 982 aaPredicted RBP7.55□□□□□ -1.2
ATPAF1-203ENST00000460928 COL9A3Q14050 684 aaPredicted RBP7.55□□□□□ -1.2
ATPAF1-203ENST00000460928 SUSD3Q96L08 255 aa7.55□□□□□ -1.2
ATPAF1-203ENST00000460928 CEP63Q96MT8 703 aa7.55□□□□□ -1.2
ATPAF1-203ENST00000460928 KCNH4Q9UQ05 1017 aa7.55□□□□□ -1.2
ATPAF1-203ENST00000460928 STARD13Q9Y3M8 1113 aa7.55□□□□□ -1.2
ATPAF1-203ENST00000460928 IQGAP2Q13576 1575 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 CTTNBP2Q8WZ74 1663 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 TSPOAP1O95153 1857 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 M0R082 166 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 RASA1P20936 1047 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 ADH7P40394 386 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 SEC13P55735 322 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 ALDH16A1Q8IZ83 802 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 ZNF280CQ8ND82 737 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 EFCC1Q9HA90 598 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 TFIP11Q9UBB9 837 aaKnown RBP7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 ATAD2Q6PL18 1390 aa7.54□□□□□ -1.2
ATPAF1-203ENST00000460928 FAM69CQ0P6D2 419 aa7.53□□□□□ -1.2
ATPAF1-203ENST00000460928 IER5Q5VY09 327 aa7.53□□□□□ -1.2
ATPAF1-203ENST00000460928 MICALL1Q8N3F8 863 aa7.53□□□□□ -1.2
ATPAF1-203ENST00000460928 Q8N3U1 123 aa7.53□□□□□ -1.2
ATPAF1-203ENST00000460928 GOLGA3Q08378 1498 aa7.53□□□□□ -1.2
ATPAF1-203ENST00000460928 DISP1Q96F81 1524 aa7.52□□□□□ -1.2
ATPAF1-203ENST00000460928 ZBTB7CA1YPR0 619 aa7.52□□□□□ -1.21
ATPAF1-203ENST00000460928 ALBP02768 609 aa7.52□□□□□ -1.21
ATPAF1-203ENST00000460928 PRRT3Q5FWE3 981 aa7.52□□□□□ -1.21
ATPAF1-203ENST00000460928 BTLAQ7Z6A9 289 aa7.52□□□□□ -1.21
ATPAF1-203ENST00000460928 DIP2BQ9P265 1576 aa7.51□□□□□ -1.21
ATPAF1-203ENST00000460928 ABCC10Q5T3U5 1492 aa7.51□□□□□ -1.21
ATPAF1-203ENST00000460928 GATA4P43694 442 aa7.51□□□□□ -1.21
ATPAF1-203ENST00000460928 C20orf204Q6ZNR8 217 aa7.51□□□□□ -1.21
ATPAF1-203ENST00000460928 SCG3Q8WXD2 468 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-203ENST00000460928 NID1P14543 1247 aa7.5□□□□□ -1.21
ATPAF1-203ENST00000460928 PTK7Q13308 1070 aa7.5□□□□□ -1.21
ATPAF1-203ENST00000460928 RTN1Q16799 776 aa7.5□□□□□ -1.21
ATPAF1-203ENST00000460928 LARP1Q6PKG0 1096 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-203ENST00000460928 RAB44Q7Z6P3 723 aaPredicted RBP7.5□□□□□ -1.21
ATPAF1-203ENST00000460928 PPP1R12CQ9BZL4 782 aa7.5□□□□□ -1.21
ATPAF1-203ENST00000460928 UGGT2Q9NYU1 1516 aa7.5□□□□□ -1.21
ATPAF1-203ENST00000460928 FAM196BA6NMK8 535 aa7.49□□□□□ -1.21
ATPAF1-203ENST00000460928 IGFBP4P22692 258 aa7.49□□□□□ -1.21
ATPAF1-203ENST00000460928 CRTC2Q53ET0 693 aaPredicted RBP7.49□□□□□ -1.21
ATPAF1-203ENST00000460928 KANK4Q5T7N3 995 aaPredicted RBP7.49□□□□□ -1.21
ATPAF1-203ENST00000460928 FHOD3Q2V2M9 1422 aa7.49□□□□□ -1.21
ATPAF1-203ENST00000460928 KIAA0556O60303 1618 aa7.49□□□□□ -1.21
ATPAF1-203ENST00000460928 TGFBR3LH3BV60 316 aa7.48□□□□□ -1.21
ATPAF1-203ENST00000460928 APBA3O96018 575 aa7.48□□□□□ -1.21
ATPAF1-203ENST00000460928 BHMTQ93088 406 aa7.48□□□□□ -1.21
ATPAF1-203ENST00000460928 CALR3Q96L12 384 aaKnown RBP7.48□□□□□ -1.21
ATPAF1-203ENST00000460928 NACC1Q96RE7 527 aa7.48□□□□□ -1.21
ATPAF1-203ENST00000460928 PTPRGP23470 1445 aa7.47□□□□□ -1.21
ATPAF1-203ENST00000460928 ITGB7P26010 798 aa7.47□□□□□ -1.21
ATPAF1-203ENST00000460928 DPYDQ12882 1025 aa7.47□□□□□ -1.21
ATPAF1-203ENST00000460928 TRIM28Q13263 835 aaKnown RBP7.47□□□□□ -1.21
ATPAF1-203ENST00000460928 DOC2BQ14184 412 aa7.47□□□□□ -1.21
ATPAF1-203ENST00000460928 C8orf86Q6ZUL3 223 aa7.47□□□□□ -1.21
ATPAF1-203ENST00000460928 TRAIPQ9BWF2 469 aa7.47□□□□□ -1.21
ATPAF1-203ENST00000460928 GSX2Q9BZM3 304 aa7.47□□□□□ -1.21
ATPAF1-203ENST00000460928 DMGDHQ9UI17 866 aaKnown RBP7.47□□□□□ -1.21
ATPAF1-203ENST00000460928 ARHGAP35Q9NRY4 1499 aa7.47□□□□□ -1.21
ATPAF1-203ENST00000460928 USP17L15C9J2P7 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L10C9JJH3 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L13C9JLJ4 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L12C9JPN9 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L11C9JVI0 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L21D6R901 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L18D6R9N7 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L22D6RA61 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L17D6RBQ6 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L19D6RCP7 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L20D6RJB6 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 LILRB5O75023 590 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 USP17L24Q0WX57 530 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 NGLY1Q96IV0 654 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 HINFPQ9BQA5 517 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 SLC6A14Q9UN76 642 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 BCS1LQ9Y276 419 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 PLB1Q6P1J6 1458 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 SAMD9Q5K651 1589 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 TNIKQ9UKE5 1360 aa7.46□□□□□ -1.22
ATPAF1-203ENST00000460928 CARMIL2Q6F5E8 1435 aa7.45□□□□□ -1.22
ATPAF1-203ENST00000460928 UBE2OQ9C0C9 1292 aaKnown RBP7.45□□□□□ -1.22
ATPAF1-203ENST00000460928 VRTNQ9H8Y1 702 aa7.45□□□□□ -1.22
ATPAF1-203ENST00000460928 C11orf16Q9NQ32 467 aa7.45□□□□□ -1.22
ATPAF1-203ENST00000460928 MAPKBP1O60336 1514 aa7.44□□□□□ -1.22
ATPAF1-203ENST00000460928 FAM229AH3BQW9 127 aa7.44□□□□□ -1.22
ATPAF1-203ENST00000460928 EPB42P16452 691 aa7.44□□□□□ -1.22
ATPAF1-203ENST00000460928 CCINQ13939 588 aa7.44□□□□□ -1.22
ATPAF1-203ENST00000460928 RSPO4Q2I0M5 234 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-203ENST00000460928 NKAPLQ5M9Q1 402 aa7.44□□□□□ -1.22
ATPAF1-203ENST00000460928 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
ATPAF1-203ENST00000460928 SEMA6BQ9H3T3 888 aa7.44□□□□□ -1.22
ATPAF1-203ENST00000460928 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-203ENST00000460928 ACIN1Q9UKV3 1341 aaKnown RBP7.44□□□□□ -1.22
ATPAF1-203ENST00000460928 ADCY10Q96PN6 1610 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms