RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 LMOD3Q0VAK6 560 aa17.87■□□□□ 0.45
SCAMP4-206ENST00000460767 PARP10Q53GL7 1025 aa17.87■□□□□ 0.45
SCAMP4-206ENST00000460767 GIGYF2Q6Y7W6 1299 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-206ENST00000460767 MRS2Q9HD23 443 aa17.87■□□□□ 0.45
SCAMP4-206ENST00000460767 RRP7AQ9Y3A4 280 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-206ENST00000460767 EIF4A1P60842 406 aaKnown RBP17.86■□□□□ 0.45
SCAMP4-206ENST00000460767 DGKZQ13574 1117 aa17.86■□□□□ 0.45
SCAMP4-206ENST00000460767 SLC10A5Q5PT55 438 aa17.86■□□□□ 0.45
SCAMP4-206ENST00000460767 CDC37L1Q7L3B6 337 aa17.86■□□□□ 0.45
SCAMP4-206ENST00000460767 PPP1R42Q7Z4L9 355 aa17.86■□□□□ 0.45
SCAMP4-206ENST00000460767 GLIS2Q9BZE0 524 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-206ENST00000460767 TMX4Q9H1E5 349 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-206ENST00000460767 SAGE1Q9NXZ1 904 aa17.86■□□□□ 0.45
SCAMP4-206ENST00000460767 MIS18AQ9NYP9 233 aa17.86■□□□□ 0.45
SCAMP4-206ENST00000460767 DUOX1Q9NRD9 1551 aa17.86■□□□□ 0.45
SCAMP4-206ENST00000460767 CHL1O00533 1208 aa17.85■□□□□ 0.45
SCAMP4-206ENST00000460767 APAF1O14727 1248 aa17.85■□□□□ 0.45
SCAMP4-206ENST00000460767 GMPSP49915 693 aaPredicted RBP17.85■□□□□ 0.45
SCAMP4-206ENST00000460767 KIAA2012Q0VF49 1180 aa17.85■□□□□ 0.45
SCAMP4-206ENST00000460767 CIAPIN1Q6FI81 312 aa17.85■□□□□ 0.45
SCAMP4-206ENST00000460767 TTLL7Q6ZT98 887 aa17.85■□□□□ 0.45
SCAMP4-206ENST00000460767 SLC51AQ86UW1 340 aa17.85■□□□□ 0.45
SCAMP4-206ENST00000460767 NLRP3Q96P20 1036 aa17.85■□□□□ 0.45
SCAMP4-206ENST00000460767 ABCC4O15439 1325 aa17.84■□□□□ 0.45
SCAMP4-206ENST00000460767 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
SCAMP4-206ENST00000460767 HIRAP54198 1017 aaPredicted RBP17.84■□□□□ 0.45
SCAMP4-206ENST00000460767 C3orf67Q6ZVT6 689 aa17.84■□□□□ 0.45
SCAMP4-206ENST00000460767 GPTP24298 496 aa17.83■□□□□ 0.44
SCAMP4-206ENST00000460767 TNIP1Q15025 636 aa17.83■□□□□ 0.44
SCAMP4-206ENST00000460767 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
SCAMP4-206ENST00000460767 SP8Q8IXZ3 490 aa17.83■□□□□ 0.44
SCAMP4-206ENST00000460767 DDX60Q8IY21 1712 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-206ENST00000460767 BBOX1O75936 387 aa17.82■□□□□ 0.44
SCAMP4-206ENST00000460767 LRP10Q7Z4F1 713 aa17.82■□□□□ 0.44
SCAMP4-206ENST00000460767 ZBTB3Q9H5J0 574 aa17.82■□□□□ 0.44
SCAMP4-206ENST00000460767 DPP8Q6V1X1 898 aaPredicted RBP17.81■□□□□ 0.44
SCAMP4-206ENST00000460767 TRPM4Q8TD43 1214 aa17.81■□□□□ 0.44
SCAMP4-206ENST00000460767 FAM155AB1AL88 458 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-206ENST00000460767 NEUROD2Q15784 382 aa17.8■□□□□ 0.44
SCAMP4-206ENST00000460767 TMC4Q7Z404 712 aa17.8■□□□□ 0.44
SCAMP4-206ENST00000460767 MPNDQ8N594 471 aa17.8■□□□□ 0.44
SCAMP4-206ENST00000460767 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
SCAMP4-206ENST00000460767 DPF2Q92785 391 aa17.8■□□□□ 0.44
SCAMP4-206ENST00000460767 CFAP44Q96MT7 982 aa17.8■□□□□ 0.44
SCAMP4-206ENST00000460767 HUNKP57058 714 aa17.79■□□□□ 0.44
SCAMP4-206ENST00000460767 UTP14AQ9BVJ6 771 aaKnown RBP17.79■□□□□ 0.44
SCAMP4-206ENST00000460767 BCL2L13Q9BXK5 485 aa17.79■□□□□ 0.44
SCAMP4-206ENST00000460767 TCERG1O14776 1098 aaKnown RBP17.78■□□□□ 0.44
SCAMP4-206ENST00000460767 MYL6BP14649 208 aa17.78■□□□□ 0.44
SCAMP4-206ENST00000460767 RGMBQ6NW40 437 aa17.78■□□□□ 0.44
SCAMP4-206ENST00000460767 CCDC102AQ96A19 550 aa17.78■□□□□ 0.44
SCAMP4-206ENST00000460767 ZIC5Q96T25 663 aa17.78■□□□□ 0.44
SCAMP4-206ENST00000460767 ZNF408Q9H9D4 720 aa17.78■□□□□ 0.44
SCAMP4-206ENST00000460767 CNOT7Q9UIV1 285 aaKnown RBP17.78■□□□□ 0.44
SCAMP4-206ENST00000460767 TSPYL4Q9UJ04 414 aa17.78■□□□□ 0.44
SCAMP4-206ENST00000460767 PDE4DIPQ5VU43 2346 aa17.78■□□□□ 0.44
SCAMP4-206ENST00000460767 AKAP11Q9UKA4 1901 aa17.78■□□□□ 0.44
SCAMP4-206ENST00000460767 TNRC18O15417 2968 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-206ENST00000460767 YDJCA8MPS7 323 aa17.77■□□□□ 0.44
SCAMP4-206ENST00000460767 H7C1D1 291 aa17.77■□□□□ 0.44
SCAMP4-206ENST00000460767 GRAPQ13588 217 aa17.77■□□□□ 0.44
SCAMP4-206ENST00000460767 GRAPLQ8TC17 118 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-206ENST00000460767 ZNF609O15014 1411 aa17.77■□□□□ 0.44
SCAMP4-206ENST00000460767 RAD17O75943 681 aa17.76■□□□□ 0.43
SCAMP4-206ENST00000460767 PRPF38BQ5VTL8 546 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-206ENST00000460767 MICALL2Q8IY33 904 aa17.76■□□□□ 0.43
SCAMP4-206ENST00000460767 IFT57Q9NWB7 429 aa17.76■□□□□ 0.43
SCAMP4-206ENST00000460767 CCER2I3L3R5 266 aa17.75■□□□□ 0.43
SCAMP4-206ENST00000460767 RPS12P25398 132 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-206ENST00000460767 PDIA6Q15084 440 aa17.75■□□□□ 0.43
SCAMP4-206ENST00000460767 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
SCAMP4-206ENST00000460767 WWC1Q8IX03 1113 aa17.75■□□□□ 0.43
SCAMP4-206ENST00000460767 GBA2Q9HCG7 927 aaPredicted RBP17.75■□□□□ 0.43
SCAMP4-206ENST00000460767 REM2Q8IYK8 340 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-206ENST00000460767 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
SCAMP4-206ENST00000460767 SHTN1A0MZ66 631 aa17.73■□□□□ 0.43
SCAMP4-206ENST00000460767 SLC10A3P09131 477 aa17.73■□□□□ 0.43
SCAMP4-206ENST00000460767 HOXB7P09629 217 aa17.73■□□□□ 0.43
SCAMP4-206ENST00000460767 DDX46Q7L014 1031 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-206ENST00000460767 KRT26Q7Z3Y9 468 aa17.73■□□□□ 0.43
SCAMP4-206ENST00000460767 USP48Q86UV5 1035 aa17.73■□□□□ 0.43
SCAMP4-206ENST00000460767 C2orf69Q8N8R5 385 aa17.73■□□□□ 0.43
SCAMP4-206ENST00000460767 IL16Q14005 1332 aa17.72■□□□□ 0.43
SCAMP4-206ENST00000460767 ZNF521Q96K83 1311 aa17.72■□□□□ 0.43
SCAMP4-206ENST00000460767 KIF23Q02241 960 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-206ENST00000460767 KRT24Q2M2I5 525 aa17.72■□□□□ 0.43
SCAMP4-206ENST00000460767 NLRP10Q86W26 655 aa17.72■□□□□ 0.43
SCAMP4-206ENST00000460767 RNF186Q9NXI6 227 aa17.72■□□□□ 0.43
SCAMP4-206ENST00000460767 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
SCAMP4-206ENST00000460767 POLR2AP24928 1970 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-206ENST00000460767 TAF1P21675 1872 aa17.71■□□□□ 0.43
SCAMP4-206ENST00000460767 PAPPA2Q9BXP8 1791 aa17.71■□□□□ 0.43
SCAMP4-206ENST00000460767 PSME4Q14997 1843 aa17.71■□□□□ 0.43
SCAMP4-206ENST00000460767 CALD1Q05682 793 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-206ENST00000460767 CTU1Q7Z7A3 348 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-206ENST00000460767 PSMD14O00487 310 aa17.7■□□□□ 0.42
SCAMP4-206ENST00000460767 SOX10P56693 466 aa17.7■□□□□ 0.42
SCAMP4-206ENST00000460767 GNAI1P63096 354 aa17.7■□□□□ 0.42
SCAMP4-206ENST00000460767 SAMD7Q7Z3H4 446 aa17.7■□□□□ 0.42
SCAMP4-206ENST00000460767 DCPSQ96C86 337 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms