RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 PAG1Q9NWQ8 432 aa17.1■□□□□ 0.33
PTPRU-205ENST00000460170 SEC63Q9UGP8 760 aaKnown RBP17.1■□□□□ 0.33
PTPRU-205ENST00000460170 HOXB7P09629 217 aa17.09■□□□□ 0.33
PTPRU-205ENST00000460170 CCDC102BQ68D86 513 aa17.09■□□□□ 0.33
PTPRU-205ENST00000460170 LEKR1Q6ZMV7 388 aa17.09■□□□□ 0.33
PTPRU-205ENST00000460170 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
PTPRU-205ENST00000460170 TMC6Q7Z403 805 aa17.09■□□□□ 0.33
PTPRU-205ENST00000460170 SLC26A6Q9BXS9 759 aa17.09■□□□□ 0.33
PTPRU-205ENST00000460170 URI1O94763 535 aaPredicted RBP17.09■□□□□ 0.33
PTPRU-205ENST00000460170 NLRP5P59047 1200 aa17.09■□□□□ 0.33
PTPRU-205ENST00000460170 ZNF444Q8N0Y2 327 aaPredicted RBP17.09■□□□□ 0.33
PTPRU-205ENST00000460170 ANKIB1Q9P2G1 1089 aa17.09■□□□□ 0.33
PTPRU-205ENST00000460170 SYCP1Q15431 976 aa17.08■□□□□ 0.33
PTPRU-205ENST00000460170 ZFYVE27Q5T4F4 411 aa17.08■□□□□ 0.33
PTPRU-205ENST00000460170 RUFY3Q7L099 469 aa17.08■□□□□ 0.33
PTPRU-205ENST00000460170 KIAA1328Q86T90 577 aa17.08■□□□□ 0.33
PTPRU-205ENST00000460170 BICC1Q9H694 974 aaKnown RBP17.08■□□□□ 0.33
PTPRU-205ENST00000460170 ANO6Q4KMQ2 910 aa17.08■□□□□ 0.32
PTPRU-205ENST00000460170 KCNG4Q8TDN1 519 aa17.08■□□□□ 0.32
PTPRU-205ENST00000460170 DCAF5Q96JK2 942 aa17.08■□□□□ 0.32
PTPRU-205ENST00000460170 ZKSCAN5Q9Y2L8 839 aa17.08■□□□□ 0.32
PTPRU-205ENST00000460170 ZNF521Q96K83 1311 aa17.08■□□□□ 0.32
PTPRU-205ENST00000460170 CCDC194A0A1B0GVG4 234 aa17.07■□□□□ 0.32
PTPRU-205ENST00000460170 CCDC171Q6TFL3 1326 aa17.07■□□□□ 0.32
PTPRU-205ENST00000460170 TMCO3Q6UWJ1 677 aa17.07■□□□□ 0.32
PTPRU-205ENST00000460170 ZBTB43O43298 467 aa17.07■□□□□ 0.32
PTPRU-205ENST00000460170 SYT1P21579 422 aa17.07■□□□□ 0.32
PTPRU-205ENST00000460170 SAMD9LQ8IVG5 1584 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 ERVK-7P63135 1459 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 TFCP2Q12800 502 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 MRPS27Q92552 414 aaKnown RBP17.06■□□□□ 0.32
PTPRU-205ENST00000460170 PRIMPOLQ96LW4 560 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 PDCL3Q9H2J4 239 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 C19orf44Q9H6X5 657 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 AOX1Q06278 1338 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 IQCEQ6IPM2 695 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 ZNF397Q8NF99 534 aaPredicted RBP17.06■□□□□ 0.32
PTPRU-205ENST00000460170 ABCC4O15439 1325 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 KIAA0232Q92628 1395 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 ZNF830Q96NB3 372 aaPredicted RBP17.06■□□□□ 0.32
PTPRU-205ENST00000460170 KIF5CO60282 957 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 SYKP43405 635 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 ALG1Q9BT22 464 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 KIF24Q5T7B8 1368 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 HS1BP3Q53T59 392 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 SLC9C2Q5TAH2 1124 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 CABLES1Q8TDN4 633 aa17.06■□□□□ 0.32
PTPRU-205ENST00000460170 USP19O94966 1318 aa17.05■□□□□ 0.32
PTPRU-205ENST00000460170 PLEKHG3A1L390 1219 aa17.05■□□□□ 0.32
PTPRU-205ENST00000460170 ISM2Q6H9L7 571 aa17.05■□□□□ 0.32
PTPRU-205ENST00000460170 CFAP65Q6ZU64 1925 aaKnown RBP17.05■□□□□ 0.32
PTPRU-205ENST00000460170 PNMA6EA0A0J9YXQ4 647 aa17.05■□□□□ 0.32
PTPRU-205ENST00000460170 KANK3Q6NY19 840 aa17.05■□□□□ 0.32
PTPRU-205ENST00000460170 MYO5CQ9NQX4 1742 aa17.05■□□□□ 0.32
PTPRU-205ENST00000460170 DYNC1I1O14576 645 aa17.05■□□□□ 0.32
PTPRU-205ENST00000460170 RNF113AO15541 343 aaKnown RBP17.05■□□□□ 0.32
PTPRU-205ENST00000460170 NOLC1Q14978 699 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTPRU-205ENST00000460170 WTAPQ15007 396 aa17.05■□□□□ 0.32
PTPRU-205ENST00000460170 CCDC152Q4G0S7 254 aa17.05■□□□□ 0.32
PTPRU-205ENST00000460170 KRT23Q9C075 422 aa17.05■□□□□ 0.32
PTPRU-205ENST00000460170 CPA1P15085 419 aa17.04■□□□□ 0.32
PTPRU-205ENST00000460170 KIF5BP33176 963 aa17.04■□□□□ 0.32
PTPRU-205ENST00000460170 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
PTPRU-205ENST00000460170 CCDC148Q8NFR7 591 aa17.04■□□□□ 0.32
PTPRU-205ENST00000460170 PRC1O43663 620 aa17.04■□□□□ 0.32
PTPRU-205ENST00000460170 KIF4BQ2VIQ3 1234 aa17.04■□□□□ 0.32
PTPRU-205ENST00000460170 CCDC186Q7Z3E2 898 aa17.04■□□□□ 0.32
PTPRU-205ENST00000460170 CASQ1P31415 396 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 ZNF76P36508 570 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 TMTC2Q8N394 836 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 CPLX3Q8WVH0 158 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 DNAJC25Q9H1X3 360 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 CNNM2Q9H8M5 875 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 SGSM2O43147 1006 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 TYRO3Q06418 890 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 FKBP15Q5T1M5 1219 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 TSPY2A6NKD2 308 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 PDE4BQ07343 736 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 CCDC150Q8NCX0 1101 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 PLEKHF1Q96S99 279 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 RAB34Q9BZG1 259 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 LGR6Q9HBX8 967 aa17.03■□□□□ 0.32
PTPRU-205ENST00000460170 CGNQ9P2M7 1197 aaKnown RBP17.03■□□□□ 0.32
PTPRU-205ENST00000460170 SYNMO15061 1565 aa17.02■□□□□ 0.32
PTPRU-205ENST00000460170 MPHOSPH10O00566 681 aaKnown RBP17.02■□□□□ 0.32
PTPRU-205ENST00000460170 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
PTPRU-205ENST00000460170 GBP3Q9H0R5 595 aa17.02■□□□□ 0.32
PTPRU-205ENST00000460170 IL2RBP14784 551 aa17.02■□□□□ 0.32
PTPRU-205ENST00000460170 SNW1Q13573 536 aaKnown RBP17.02■□□□□ 0.32
PTPRU-205ENST00000460170 SPA17Q15506 151 aa17.02■□□□□ 0.32
PTPRU-205ENST00000460170 SKIDA1Q1XH10 827 aa17.02■□□□□ 0.32
PTPRU-205ENST00000460170 SIRT1Q96EB6 747 aa17.02■□□□□ 0.32
PTPRU-205ENST00000460170 TTC12Q9H892 705 aaPredicted RBP17.02■□□□□ 0.32
PTPRU-205ENST00000460170 H0YHG0 523 aa17.02■□□□□ 0.31
PTPRU-205ENST00000460170 ERLIN2O94905 339 aa17.02■□□□□ 0.31
PTPRU-205ENST00000460170 APOBRQ0VD83 1088 aa17.02■□□□□ 0.31
PTPRU-205ENST00000460170 NEO1Q92859 1461 aa17.02■□□□□ 0.31
PTPRU-205ENST00000460170 LDHCP07864 332 aa17.01■□□□□ 0.31
PTPRU-205ENST00000460170 NBPF7P0C2Y1 421 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms