RNA–Protein interactions for RNA: ENST00000460030.1

CENPA-204, Transcript of centromere protein A, humanhuman

TSL 1 (best)

Gene CENPA, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-204ENST00000460030 IPO8O15397 1037 aaKnown RBP23.8■■□□□ 1.4
CENPA-204ENST00000460030 HSP90B1P14625 803 aaKnown RBP23.8■■□□□ 1.4
CENPA-204ENST00000460030 GCKRQ14397 625 aa23.8■■□□□ 1.4
CENPA-204ENST00000460030 SYNE4Q8N205 404 aa23.8■■□□□ 1.4
CENPA-204ENST00000460030 ALDH1L1O75891 902 aa23.79■■□□□ 1.4
CENPA-204ENST00000460030 SLC4A10Q6U841 1118 aa23.79■■□□□ 1.4
CENPA-204ENST00000460030 RBM46Q8TBY0 533 aaKnown RBP23.79■■□□□ 1.4
CENPA-204ENST00000460030 ZNF277Q9NRM2 450 aaPredicted RBP23.79■■□□□ 1.4
CENPA-204ENST00000460030 IRS4O14654 1257 aaPredicted RBP23.78■■□□□ 1.4
CENPA-204ENST00000460030 HCLS1P14317 486 aaPredicted RBP23.78■■□□□ 1.4
CENPA-204ENST00000460030 FKBP4Q02790 459 aaKnown RBP eCLIP23.78■■□□□ 1.4
CENPA-204ENST00000460030 SRCIN1Q9C0H9 1055 aa23.78■■□□□ 1.4
CENPA-204ENST00000460030 H7C1W4 665 aa23.77■■□□□ 1.4
CENPA-204ENST00000460030 CDHR2Q9BYE9 1310 aa23.77■■□□□ 1.4
CENPA-204ENST00000460030 DICER1Q9UPY3 1922 aaKnown RBP23.76■■□□□ 1.39
CENPA-204ENST00000460030 HOXA10P31260 410 aaPredicted RBP23.76■■□□□ 1.39
CENPA-204ENST00000460030 RTL5Q5HYW3 569 aaPredicted RBP23.76■■□□□ 1.39
CENPA-204ENST00000460030 SNED1Q8TER0 1413 aa23.76■■□□□ 1.39
CENPA-204ENST00000460030 DPY19L2Q6NUT2 758 aa23.75■■□□□ 1.39
CENPA-204ENST00000460030 RTKN2Q8IZC4 609 aa23.75■■□□□ 1.39
CENPA-204ENST00000460030 RBM17Q96I25 401 aaKnown RBP23.75■■□□□ 1.39
CENPA-204ENST00000460030 POTECB2RU33 542 aa23.74■■□□□ 1.39
CENPA-204ENST00000460030 DDNO94850 711 aaPredicted RBP23.74■■□□□ 1.39
CENPA-204ENST00000460030 VEGFAP15692 232 aaPredicted RBP23.74■■□□□ 1.39
CENPA-204ENST00000460030 SF3B3Q15393 1217 aaKnown RBP23.74■■□□□ 1.39
CENPA-204ENST00000460030 ATF7IPQ6VMQ6 1270 aa23.74■■□□□ 1.39
CENPA-204ENST00000460030 FRAT1Q92837 279 aaPredicted RBP23.74■■□□□ 1.39
CENPA-204ENST00000460030 PPEF1O14829 653 aaPredicted RBP23.73■■□□□ 1.39
CENPA-204ENST00000460030 CCT4P50991 539 aaKnown RBP23.73■■□□□ 1.39
CENPA-204ENST00000460030 ZKSCAN2Q63HK3 967 aa23.73■■□□□ 1.39
CENPA-204ENST00000460030 UBE3BQ7Z3V4 1068 aa23.73■■□□□ 1.39
CENPA-204ENST00000460030 JARID2Q92833 1246 aaPredicted RBP23.73■■□□□ 1.39
CENPA-204ENST00000460030 CRAMP1Q96RY5 1269 aa23.73■■□□□ 1.39
CENPA-204ENST00000460030 RCAN3Q9UKA8 241 aa23.73■■□□□ 1.39
CENPA-204ENST00000460030 GRM8O00222 908 aa23.72■■□□□ 1.39
CENPA-204ENST00000460030 PDE8AO60658 829 aa23.72■■□□□ 1.39
CENPA-204ENST00000460030 TRIM27P14373 513 aa23.72■■□□□ 1.39
CENPA-204ENST00000460030 CASP7P55210 303 aa23.72■■□□□ 1.39
CENPA-204ENST00000460030 WDR90Q96KV7 1748 aa23.72■■□□□ 1.39
CENPA-204ENST00000460030 ABCC4O15439 1325 aa23.71■■□□□ 1.39
CENPA-204ENST00000460030 ZNF541Q9H0D2 1346 aa23.71■■□□□ 1.39
CENPA-204ENST00000460030 IARSP41252 1262 aaKnown RBP23.71■■□□□ 1.39
CENPA-204ENST00000460030 PLA2G12BQ9BX93 195 aa23.71■■□□□ 1.39
CENPA-204ENST00000460030 C9orf78Q9NZ63 289 aaPredicted RBP23.71■■□□□ 1.39
CENPA-204ENST00000460030 FSTL1Q12841 308 aa23.7■■□□□ 1.38
CENPA-204ENST00000460030 UTYO14607 1347 aa23.69■■□□□ 1.38
CENPA-204ENST00000460030 APLP1P51693 650 aa23.69■■□□□ 1.38
CENPA-204ENST00000460030 HTRA3P83110 453 aa23.69■■□□□ 1.38
CENPA-204ENST00000460030 SMC1BQ8NDV3 1235 aa23.69■■□□□ 1.38
CENPA-204ENST00000460030 PSMD1Q99460 953 aa23.69■■□□□ 1.38
CENPA-204ENST00000460030 LAMB2P55268 1798 aa23.68■■□□□ 1.38
CENPA-204ENST00000460030 INTS3Q68E01 1043 aaKnown RBP23.68■■□□□ 1.38
CENPA-204ENST00000460030 DDX46Q7L014 1031 aaKnown RBP23.68■■□□□ 1.38
CENPA-204ENST00000460030 COL4A5P29400 1685 aa23.67■■□□□ 1.38
CENPA-204ENST00000460030 CTSWP56202 376 aa23.67■■□□□ 1.38
CENPA-204ENST00000460030 CCDC152Q4G0S7 254 aa23.67■■□□□ 1.38
CENPA-204ENST00000460030 CC2D2BQ6DHV5 1058 aa23.67■■□□□ 1.38
CENPA-204ENST00000460030 USP44Q9H0E7 712 aa23.66■■□□□ 1.38
CENPA-204ENST00000460030 BBOX1O75936 387 aa23.65■■□□□ 1.38
CENPA-204ENST00000460030 NBPF7P0C2Y1 421 aaPredicted RBP23.65■■□□□ 1.38
CENPA-204ENST00000460030 POTEIP0CG38 1075 aa23.65■■□□□ 1.38
CENPA-204ENST00000460030 POTEJP0CG39 1038 aa23.65■■□□□ 1.38
CENPA-204ENST00000460030 TTLL11Q8NHH1 800 aa23.65■■□□□ 1.38
CENPA-204ENST00000460030 DDX60Q8IY21 1712 aaKnown RBP23.64■■□□□ 1.38
CENPA-204ENST00000460030 CSF1RP07333 972 aa23.64■■□□□ 1.37
CENPA-204ENST00000460030 GRAPQ13588 217 aa23.64■■□□□ 1.37
CENPA-204ENST00000460030 GRAPLQ8TC17 118 aaPredicted RBP23.64■■□□□ 1.37
CENPA-204ENST00000460030 CLUAP1Q96AJ1 413 aa23.64■■□□□ 1.37
CENPA-204ENST00000460030 ATP6V0A2Q9Y487 856 aa23.64■■□□□ 1.37
CENPA-204ENST00000460030 FZD9O00144 591 aa23.63■■□□□ 1.37
CENPA-204ENST00000460030 DZIP1LQ8IYY4 767 aaKnown RBP23.63■■□□□ 1.37
CENPA-204ENST00000460030 TNNQ9UQP3 1299 aa23.63■■□□□ 1.37
CENPA-204ENST00000460030 MS4A1P11836 297 aa23.62■■□□□ 1.37
CENPA-204ENST00000460030 FOXO4P98177 505 aa23.62■■□□□ 1.37
CENPA-204ENST00000460030 FTSJ3Q8IY81 847 aaKnown RBP23.62■■□□□ 1.37
CENPA-204ENST00000460030 LARGE2Q8N3Y3 721 aa23.62■■□□□ 1.37
CENPA-204ENST00000460030 JDP2Q8WYK2 163 aa23.62■■□□□ 1.37
CENPA-204ENST00000460030 L3MBTL3Q96JM7 780 aaPredicted RBP23.62■■□□□ 1.37
CENPA-204ENST00000460030 RTL9Q8NET4 1388 aa23.62■■□□□ 1.37
CENPA-204ENST00000460030 TMC4Q7Z404 712 aa23.61■■□□□ 1.37
CENPA-204ENST00000460030 TMX4Q9H1E5 349 aaPredicted RBP23.61■■□□□ 1.37
CENPA-204ENST00000460030 TAF1P21675 1872 aa23.6■■□□□ 1.37
CENPA-204ENST00000460030 AOC3Q16853 763 aa23.6■■□□□ 1.37
CENPA-204ENST00000460030 GRIPAP1Q4V328 841 aa23.6■■□□□ 1.37
CENPA-204ENST00000460030 HDAC5Q9UQL6 1122 aa23.6■■□□□ 1.37
CENPA-204ENST00000460030 COL4A1P02462 1669 aa23.6■■□□□ 1.37
CENPA-204ENST00000460030 PPIP5K2O43314 1243 aa23.59■■□□□ 1.37
CENPA-204ENST00000460030 RPS8P62241 208 aaKnown RBP23.59■■□□□ 1.37
CENPA-204ENST00000460030 EPHA10Q5JZY3 1008 aa23.59■■□□□ 1.37
CENPA-204ENST00000460030 TMEM57Q8N5G2 664 aa23.59■■□□□ 1.37
CENPA-204ENST00000460030 DNAJC5GQ8N7S2 189 aa23.59■■□□□ 1.37
CENPA-204ENST00000460030 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.59■■□□□ 1.37
CENPA-204ENST00000460030 CELF1Q92879 486 aaKnown RBP23.59■■□□□ 1.37
CENPA-204ENST00000460030 KAZALD1Q96I82 304 aa23.59■■□□□ 1.37
CENPA-204ENST00000460030 SUCLG2Q96I99 432 aa23.59■■□□□ 1.37
CENPA-204ENST00000460030 CCDC85AQ96PX6 553 aaPredicted RBP23.59■■□□□ 1.37
CENPA-204ENST00000460030 TAF1DQ9H5J8 278 aaPredicted RBP23.59■■□□□ 1.37
CENPA-204ENST00000460030 GREM2Q9H772 168 aa23.59■■□□□ 1.37
CENPA-204ENST00000460030 SEC31BQ9NQW1 1179 aa23.59■■□□□ 1.37
CENPA-204ENST00000460030 GJA3Q9Y6H8 435 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms