RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ZNF219Q9P2Y4 722 aaPredicted RBP10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 BCORQ6W2J9 1755 aa10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 ARFGEF2Q9Y6D5 1785 aa10.89□□□□□ -0.67
CLTCL1-204ENST00000458188 CDHR2Q9BYE9 1310 aa10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 PXDNLA1KZ92 1463 aa10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 PDE6BP35913 854 aa10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 PRELPP51888 382 aa10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 CTSWP56202 376 aa10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 COL13A1Q5TAT6 717 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 TNS4Q8IZW8 715 aa10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 DNAJC5GQ8N7S2 189 aa10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 KLHDC4Q8TBB5 520 aa10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 ZNF594Q96JF6 807 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 GREM2Q9H772 168 aa10.88□□□□□ -0.67
CLTCL1-204ENST00000458188 COL24A1Q17RW2 1714 aa10.87□□□□□ -0.67
CLTCL1-204ENST00000458188 QSER1Q2KHR3 1735 aa10.87□□□□□ -0.67
CLTCL1-204ENST00000458188 NUP98P52948 1817 aa10.87□□□□□ -0.67
CLTCL1-204ENST00000458188 H0YIN7 160 aa10.87□□□□□ -0.67
CLTCL1-204ENST00000458188 FAM161AQ3B820 660 aa10.87□□□□□ -0.67
CLTCL1-204ENST00000458188 RPGRQ92834 1020 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-204ENST00000458188 IBTKQ9P2D0 1353 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-204ENST00000458188 PNMA6EA0A0J9YXQ4 647 aa10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 TOMM70O94826 608 aa10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 CSF1RP07333 972 aa10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 SRGNP10124 158 aa10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 KCNA3P22001 575 aa10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 ITGA6P23229 1130 aa10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 SF3B3Q15393 1217 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 CCDC152Q4G0S7 254 aa10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 CELF1Q92879 486 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 PLA2G12BQ9BX93 195 aa10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 PCDHB15Q9Y5E8 787 aa10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 CD2APQ9Y5K6 639 aa10.86□□□□□ -0.67
CLTCL1-204ENST00000458188 KLRG2A4D1S0 409 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 KIF3CO14782 793 aa10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 SRGAP3O43295 1099 aa10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 NEFLP07196 543 aa10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 ATP8B2P98198 1209 aa10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 CEP85Q6P2H3 762 aa10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 OLFM4Q6UX06 510 aa10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 DDX46Q7L014 1031 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 SIRT2Q8IXJ6 389 aa10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 RBM17Q96I25 401 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 BCL11AQ9H165 835 aa10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 PA2G4Q9UQ80 394 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-204ENST00000458188 C10orf71Q711Q0 1435 aa10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 ANKRD18BA2A2Z9 1011 aa10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 HSP90B1P14625 803 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 NPR1P16066 1061 aa10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 TGFB2P61812 414 aa10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 IFIT5Q13325 482 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 CCDC57Q2TAC2 916 aa10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 RABL6Q3YEC7 729 aaPredicted RBP10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 CRY2Q49AN0 593 aa10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 TAF7LQ5H9L4 462 aa10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 MASTLQ96GX5 879 aa10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 PUS3Q9BZE2 481 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 SIL1Q9H173 461 aa10.84□□□□□ -0.67
CLTCL1-204ENST00000458188 RFX5P48382 616 aaPredicted RBP10.83□□□□□ -0.68
CLTCL1-204ENST00000458188 CHMP4BQ9H444 224 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-204ENST00000458188 HDAC5Q9UQL6 1122 aa10.83□□□□□ -0.68
CLTCL1-204ENST00000458188 APBB1O00213 710 aa10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 C21orf2O43822 256 aa10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 HOXA10P31260 410 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 RPS8P62241 208 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 GRAPQ13588 217 aa10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 LRRC24Q50LG9 513 aa10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 STYK1Q6J9G0 422 aa10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 ANKRD18AQ8IVF6 992 aa10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 GRAPLQ8TC17 118 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 PIM2Q9P1W9 311 aa10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 BCS1LQ9Y276 419 aa10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 CACNA1FO60840 1977 aa10.82□□□□□ -0.68
CLTCL1-204ENST00000458188 ANKRD36CQ5JPF3 1778 aa10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 WTIPA6NIX2 430 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 PPEF1O14829 653 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 IGHDP01880 384 aa10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 ALDH1B1P30837 517 aa10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 IGHMBP2P38935 993 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 PTPN12Q05209 780 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 PRPF40BQ6NWY9 871 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 RPAP2Q8IXW5 612 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 TTLL6Q8N841 843 aa10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 HELBQ8NG08 1087 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 CNKSR1Q969H4 720 aa10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 KLRG1Q96E93 195 aa10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 CRAMP1Q96RY5 1269 aa10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 MPHOSPH8Q99549 860 aa10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 TNRC6CQ9HCJ0 1690 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-204ENST00000458188 COL4A1P02462 1669 aa10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 AFDNP55196 1824 aaKnown RBP10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 SNAP23O00161 211 aa10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 TAF5LO75529 589 aa10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 SURF6O75683 361 aaKnown RBP10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 MTX1Q13505 466 aa10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 POLA2Q14181 598 aa10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 DALRD3Q5D0E6 543 aaKnown RBP10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 LDHAL6AQ6ZMR3 332 aa10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 C16orf71Q8IYS4 520 aaPredicted RBP10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 JMYQ8N9B5 988 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms