RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 PALD1Q9ULE6 856 aa19.19■□□□□ 0.66
LSS-205ENST00000457828 KCNQ3O43525 872 aa19.19■□□□□ 0.66
LSS-205ENST00000457828 STK32BQ9NY57 414 aa19.19■□□□□ 0.66
LSS-205ENST00000457828 HIP1O00291 1037 aa19.18■□□□□ 0.66
LSS-205ENST00000457828 AK2P54819 239 aa19.18■□□□□ 0.66
LSS-205ENST00000457828 ADAMTS13Q76LX8 1427 aa19.18■□□□□ 0.66
LSS-205ENST00000457828 ERVV-2B6SEH9 535 aa19.18■□□□□ 0.66
LSS-205ENST00000457828 UVSSAQ2YD98 709 aa19.18■□□□□ 0.66
LSS-205ENST00000457828 PNMA6EA0A0J9YXQ4 647 aa19.18■□□□□ 0.66
LSS-205ENST00000457828 INTS4Q96HW7 963 aaKnown RBP19.18■□□□□ 0.66
LSS-205ENST00000457828 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
LSS-205ENST00000457828 CCDC152Q4G0S7 254 aa19.17■□□□□ 0.66
LSS-205ENST00000457828 UTP14AQ9BVJ6 771 aaKnown RBP19.17■□□□□ 0.66
LSS-205ENST00000457828 BAG6P46379 1132 aa19.17■□□□□ 0.66
LSS-205ENST00000457828 MARCH6O60337 910 aa19.17■□□□□ 0.66
LSS-205ENST00000457828 ALDH1L1O75891 902 aa19.17■□□□□ 0.66
LSS-205ENST00000457828 KDM4AO75164 1064 aa19.16■□□□□ 0.66
LSS-205ENST00000457828 PRIMPOLQ96LW4 560 aa19.16■□□□□ 0.66
LSS-205ENST00000457828 NSFL1CQ9UNZ2 370 aaKnown RBP19.16■□□□□ 0.66
LSS-205ENST00000457828 F13A1P00488 732 aa19.16■□□□□ 0.66
LSS-205ENST00000457828 SYT1P21579 422 aa19.16■□□□□ 0.66
LSS-205ENST00000457828 ZSCAN29Q8IWY8 852 aaPredicted RBP19.16■□□□□ 0.66
LSS-205ENST00000457828 ANKRD1Q15327 319 aa19.16■□□□□ 0.66
LSS-205ENST00000457828 IGSF1Q8N6C5 1336 aa19.16■□□□□ 0.66
LSS-205ENST00000457828 PPFIA3O75145 1194 aa19.16■□□□□ 0.66
LSS-205ENST00000457828 SMC2O95347 1197 aa19.16■□□□□ 0.66
LSS-205ENST00000457828 BRD1O95696 1058 aa19.16■□□□□ 0.66
LSS-205ENST00000457828 ME1P48163 572 aa19.16■□□□□ 0.66
LSS-205ENST00000457828 SH2B1Q9NRF2 756 aaPredicted RBP19.16■□□□□ 0.66
LSS-205ENST00000457828 PIK3C2BO00750 1634 aa19.15■□□□□ 0.66
LSS-205ENST00000457828 TRIM37O94972 964 aa19.15■□□□□ 0.66
LSS-205ENST00000457828 SLC5A1P13866 664 aa19.15■□□□□ 0.66
LSS-205ENST00000457828 HSPA1LP34931 641 aa19.15■□□□□ 0.66
LSS-205ENST00000457828 PARP3Q9Y6F1 533 aa19.15■□□□□ 0.66
LSS-205ENST00000457828 BABAM1Q9NWV8 329 aa19.15■□□□□ 0.66
LSS-205ENST00000457828 RTL1A6NKG5 1358 aa19.15■□□□□ 0.66
LSS-205ENST00000457828 AFF2P51816 1311 aa19.15■□□□□ 0.66
LSS-205ENST00000457828 SEPT12Q8IYM1 358 aa19.14■□□□□ 0.66
LSS-205ENST00000457828 RASSF8Q8NHQ8 419 aa19.14■□□□□ 0.66
LSS-205ENST00000457828 CCDC87Q9NVE4 849 aa19.14■□□□□ 0.66
LSS-205ENST00000457828 USP16Q9Y5T5 823 aa19.14■□□□□ 0.66
LSS-205ENST00000457828 POLD1P28340 1107 aa19.14■□□□□ 0.65
LSS-205ENST00000457828 ZSCAN25Q6NSZ9 544 aa19.14■□□□□ 0.65
LSS-205ENST00000457828 CREBRFQ8IUR6 639 aa19.14■□□□□ 0.65
LSS-205ENST00000457828 NACAP1Q9BZK3 213 aa19.14■□□□□ 0.65
LSS-205ENST00000457828 SNRKQ9NRH2 765 aa19.14■□□□□ 0.65
LSS-205ENST00000457828 C1orf167Q5SNV9 1468 aa19.14■□□□□ 0.65
LSS-205ENST00000457828 EIF4A1P60842 406 aaKnown RBP19.14■□□□□ 0.65
LSS-205ENST00000457828 FAM89AQ96GI7 184 aa19.14■□□□□ 0.65
LSS-205ENST00000457828 ANKRD18AQ8IVF6 992 aa19.14■□□□□ 0.65
LSS-205ENST00000457828 ECHDC1Q9NTX5 307 aa19.14■□□□□ 0.65
LSS-205ENST00000457828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.14■□□□□ 0.656e-12■□□□□ 8.5
LSS-205ENST00000457828 ASAP1Q9ULH1 1129 aa19.14■□□□□ 0.65
LSS-205ENST00000457828 CHMP4CQ96CF2 233 aa19.13■□□□□ 0.65
LSS-205ENST00000457828 IRS4O14654 1257 aaPredicted RBP19.13■□□□□ 0.65
LSS-205ENST00000457828 TNNT1P13805 278 aa19.13■□□□□ 0.65
LSS-205ENST00000457828 ZNF500O60304 480 aaPredicted RBP19.13■□□□□ 0.65
LSS-205ENST00000457828 ATP2B2Q01814 1243 aa19.13■□□□□ 0.65
LSS-205ENST00000457828 SCAND2PQ9GZW5 306 aaPredicted RBP19.13■□□□□ 0.65
LSS-205ENST00000457828 KRT27Q7Z3Y8 459 aa19.12■□□□□ 0.65
LSS-205ENST00000457828 CCDC186Q7Z3E2 898 aa19.12■□□□□ 0.65
LSS-205ENST00000457828 LAMC1P11047 1609 aa19.12■□□□□ 0.65
LSS-205ENST00000457828 IKQ13123 557 aaPredicted RBP19.12■□□□□ 0.65
LSS-205ENST00000457828 CLIP2Q9UDT6 1046 aa19.12■□□□□ 0.65
LSS-205ENST00000457828 ZNF165P49910 485 aa19.11■□□□□ 0.65
LSS-205ENST00000457828 FAM173BQ6P4H8 233 aa19.11■□□□□ 0.65
LSS-205ENST00000457828 CCDC24Q8N4L8 307 aa19.11■□□□□ 0.65
LSS-205ENST00000457828 NAT10Q9H0A0 1025 aaKnown RBP19.11■□□□□ 0.65
LSS-205ENST00000457828 IGSF3O75054 1194 aa19.11■□□□□ 0.65
LSS-205ENST00000457828 NYXQ9GZU5 481 aa19.11■□□□□ 0.65
LSS-205ENST00000457828 CEP170BQ9Y4F5 1589 aaPredicted RBP19.11■□□□□ 0.65
LSS-205ENST00000457828 BRPF1P55201 1214 aaPredicted RBP19.11■□□□□ 0.65
LSS-205ENST00000457828 KCNQ4P56696 695 aa19.11■□□□□ 0.65
LSS-205ENST00000457828 TRMT1Q9NXH9 659 aaKnown RBP19.11■□□□□ 0.65
LSS-205ENST00000457828 DACT1Q9NYF0 836 aa19.11■□□□□ 0.65
LSS-205ENST00000457828 FRMPD1Q5SYB0 1578 aa19.11■□□□□ 0.65
LSS-205ENST00000457828 SLC3A2P08195 630 aaKnown RBP19.11■□□□□ 0.65
LSS-205ENST00000457828 HOXB7P09629 217 aa19.11■□□□□ 0.65
LSS-205ENST00000457828 MNS1Q8NEH6 495 aa19.1■□□□□ 0.65
LSS-205ENST00000457828 TDO2P48775 406 aa19.1■□□□□ 0.65
LSS-205ENST00000457828 GUCY1B3Q02153 619 aa19.1■□□□□ 0.65
LSS-205ENST00000457828 FAM196AQ6ZSG2 479 aa19.1■□□□□ 0.65
LSS-205ENST00000457828 AIDAQ96BJ3 306 aa19.1■□□□□ 0.65
LSS-205ENST00000457828 IQSEC3Q9UPP2 1182 aaPredicted RBP19.1■□□□□ 0.65
LSS-205ENST00000457828 GIGYF1O75420 1035 aaPredicted RBP19.09■□□□□ 0.65
LSS-205ENST00000457828 SART3Q15020 963 aaKnown RBP19.09■□□□□ 0.65
LSS-205ENST00000457828 PA2G4Q9UQ80 394 aaKnown RBP19.09■□□□□ 0.65
LSS-205ENST00000457828 LOC102724428A0A0B4J2F2 783 aa19.09■□□□□ 0.65
LSS-205ENST00000457828 SIK1P57059 783 aa19.09■□□□□ 0.65
LSS-205ENST00000457828 SOS1Q07889 1333 aaPredicted RBP19.09■□□□□ 0.65
LSS-205ENST00000457828 PTGS1P23219 599 aa19.09■□□□□ 0.65
LSS-205ENST00000457828 STK38Q15208 465 aa19.09■□□□□ 0.65
LSS-205ENST00000457828 DZIP1Q86YF9 867 aaKnown RBP19.09■□□□□ 0.65
LSS-205ENST00000457828 PLBD2Q8NHP8 589 aa19.09■□□□□ 0.65
LSS-205ENST00000457828 CFAP45Q9UL16 551 aa19.09■□□□□ 0.65
LSS-205ENST00000457828 TRIM29Q14134 588 aa19.09■□□□□ 0.65
LSS-205ENST00000457828 ANO6Q4KMQ2 910 aa19.09■□□□□ 0.65
LSS-205ENST00000457828 CNBD1Q8NA66 436 aa19.09■□□□□ 0.65
LSS-205ENST00000457828 HELBQ8NG08 1087 aaPredicted RBP19.09■□□□□ 0.65
LSS-205ENST00000457828 TMOD2Q9NZR1 351 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms