RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
SNHG17-208ENST00000456953 ZIC5Q96T25 663 aa17.48■□□□□ 0.39
SNHG17-208ENST00000456953 SAGE1Q9NXZ1 904 aa17.48■□□□□ 0.39
SNHG17-208ENST00000456953 ABCC4O15439 1325 aa17.47■□□□□ 0.39
SNHG17-208ENST00000456953 BBOX1O75936 387 aa17.47■□□□□ 0.39
SNHG17-208ENST00000456953 RAD17O75943 681 aa17.47■□□□□ 0.39
SNHG17-208ENST00000456953 MYL6BP14649 208 aa17.47■□□□□ 0.39
SNHG17-208ENST00000456953 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
SNHG17-208ENST00000456953 CNOT7Q9UIV1 285 aaKnown RBP17.47■□□□□ 0.39
SNHG17-208ENST00000456953 KDM3BQ7LBC6 1761 aa17.46■□□□□ 0.39
SNHG17-208ENST00000456953 H7C1D1 291 aa17.46■□□□□ 0.39
SNHG17-208ENST00000456953 USP48Q86UV5 1035 aa17.46■□□□□ 0.39
SNHG17-208ENST00000456953 SP8Q8IXZ3 490 aa17.46■□□□□ 0.39
SNHG17-208ENST00000456953 MPNDQ8N594 471 aa17.46■□□□□ 0.39
SNHG17-208ENST00000456953 SOX10P56693 466 aa17.45■□□□□ 0.38
SNHG17-208ENST00000456953 EIF4A1P60842 406 aaKnown RBP17.45■□□□□ 0.38
SNHG17-208ENST00000456953 RGMBQ6NW40 437 aa17.45■□□□□ 0.38
SNHG17-208ENST00000456953 UTP14AQ9BVJ6 771 aaKnown RBP17.45■□□□□ 0.38
SNHG17-208ENST00000456953 ERBB4Q15303 1308 aa17.45■□□□□ 0.38
SNHG17-208ENST00000456953 FAM155AB1AL88 458 aaPredicted RBP17.44■□□□□ 0.38
SNHG17-208ENST00000456953 MICALL2Q8IY33 904 aa17.44■□□□□ 0.38
SNHG17-208ENST00000456953 CCDC102AQ96A19 550 aa17.44■□□□□ 0.38
SNHG17-208ENST00000456953 PRPF38BQ5VTL8 546 aaKnown RBP17.43■□□□□ 0.38
SNHG17-208ENST00000456953 KRT26Q7Z3Y9 468 aa17.43■□□□□ 0.38
SNHG17-208ENST00000456953 DPF2Q92785 391 aa17.43■□□□□ 0.38
SNHG17-208ENST00000456953 SHTN1A0MZ66 631 aa17.42■□□□□ 0.38
SNHG17-208ENST00000456953 YDJCA8MPS7 323 aa17.42■□□□□ 0.38
SNHG17-208ENST00000456953 KIF23Q02241 960 aaPredicted RBP17.42■□□□□ 0.38
SNHG17-208ENST00000456953 C2orf69Q8N8R5 385 aa17.42■□□□□ 0.38
SNHG17-208ENST00000456953 GBA2Q9HCG7 927 aaPredicted RBP17.42■□□□□ 0.38
SNHG17-208ENST00000456953 TRPA1O75762 1119 aa17.41■□□□□ 0.38
SNHG17-208ENST00000456953 TMC4Q7Z404 712 aa17.41■□□□□ 0.38
SNHG17-208ENST00000456953 RNF186Q9NXI6 227 aa17.41■□□□□ 0.38
SNHG17-208ENST00000456953 ANKRD36CQ5JPF3 1778 aa17.4■□□□□ 0.38
SNHG17-208ENST00000456953 ZNF157P51786 506 aaPredicted RBP17.4■□□□□ 0.38
SNHG17-208ENST00000456953 DLK2Q6UY11 383 aa17.4■□□□□ 0.38
SNHG17-208ENST00000456953 DDX46Q7L014 1031 aaKnown RBP17.4■□□□□ 0.38
SNHG17-208ENST00000456953 SAMD7Q7Z3H4 446 aa17.4■□□□□ 0.38
SNHG17-208ENST00000456953 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
SNHG17-208ENST00000456953 LAMB2P55268 1798 aa17.4■□□□□ 0.38
SNHG17-208ENST00000456953 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
SNHG17-208ENST00000456953 NEFMP07197 916 aa17.39■□□□□ 0.37
SNHG17-208ENST00000456953 PPP2R1AP30153 589 aa17.39■□□□□ 0.37
SNHG17-208ENST00000456953 GRAPQ13588 217 aa17.39■□□□□ 0.37
SNHG17-208ENST00000456953 CTU1Q7Z7A3 348 aaKnown RBP17.39■□□□□ 0.37
SNHG17-208ENST00000456953 GRAPLQ8TC17 118 aaPredicted RBP17.39■□□□□ 0.37
SNHG17-208ENST00000456953 AKAP11Q9UKA4 1901 aa17.39■□□□□ 0.37
SNHG17-208ENST00000456953 PSMD14O00487 310 aa17.38■□□□□ 0.37
SNHG17-208ENST00000456953 HCLS1P14317 486 aaPredicted RBP17.38■□□□□ 0.37
SNHG17-208ENST00000456953 RPS12P25398 132 aaKnown RBP17.38■□□□□ 0.37
SNHG17-208ENST00000456953 TBC1D10BQ4KMP7 808 aaPredicted RBP17.38■□□□□ 0.37
SNHG17-208ENST00000456953 LRP10Q7Z4F1 713 aa17.38■□□□□ 0.37
SNHG17-208ENST00000456953 DCPSQ96C86 337 aaKnown RBP17.38■□□□□ 0.37
SNHG17-208ENST00000456953 DLG5Q8TDM6 1919 aa17.38■□□□□ 0.37
SNHG17-208ENST00000456953 ADM5C9JUS6 153 aa17.37■□□□□ 0.37
SNHG17-208ENST00000456953 EGFRP00533 1210 aa17.37■□□□□ 0.37
SNHG17-208ENST00000456953 SLC10A3P09131 477 aa17.37■□□□□ 0.37
SNHG17-208ENST00000456953 HSP90AB3PQ58FF7 597 aa17.37■□□□□ 0.37
SNHG17-208ENST00000456953 REM2Q8IYK8 340 aaPredicted RBP17.37■□□□□ 0.37
SNHG17-208ENST00000456953 LRRC37AA6NMS7 1700 aa17.37■□□□□ 0.37
SNHG17-208ENST00000456953 PDIA6Q15084 440 aa17.36■□□□□ 0.37
SNHG17-208ENST00000456953 WASHC4Q2M389 1173 aa17.36■□□□□ 0.37
SNHG17-208ENST00000456953 NLRP10Q86W26 655 aa17.36■□□□□ 0.37
SNHG17-208ENST00000456953 CSRNP1Q96S65 589 aa17.36■□□□□ 0.37
SNHG17-208ENST00000456953 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
SNHG17-208ENST00000456953 POLR2AP24928 1970 aaKnown RBP17.35■□□□□ 0.37
SNHG17-208ENST00000456953 DBNDD1Q9H9R9 158 aa17.35■□□□□ 0.37
SNHG17-208ENST00000456953 TRMT112Q9UI30 125 aaKnown RBP17.35■□□□□ 0.37
SNHG17-208ENST00000456953 SH3TC1Q8TE82 1336 aa17.35■□□□□ 0.37
SNHG17-208ENST00000456953 NFE2L2Q16236 605 aa17.34■□□□□ 0.37
SNHG17-208ENST00000456953 PKN2Q16513 984 aaKnown RBP17.34■□□□□ 0.37
SNHG17-208ENST00000456953 SULF1Q8IWU6 871 aa17.34■□□□□ 0.37
SNHG17-208ENST00000456953 PROSER3Q2NL68 480 aa17.33■□□□□ 0.36
SNHG17-208ENST00000456953 RBM26Q5T8P6 1007 aaKnown RBP17.33■□□□□ 0.36
SNHG17-208ENST00000456953 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.36
SNHG17-208ENST00000456953 HPS5Q9UPZ3 1129 aa17.33■□□□□ 0.36
SNHG17-208ENST00000456953 TAF1P21675 1872 aa17.33■□□□□ 0.36
SNHG17-208ENST00000456953 EIF2S2P20042 333 aaKnown RBP17.32■□□□□ 0.36
SNHG17-208ENST00000456953 KIF4BQ2VIQ3 1234 aa17.32■□□□□ 0.36
SNHG17-208ENST00000456953 PLEKHF1Q96S99 279 aa17.32■□□□□ 0.36
SNHG17-208ENST00000456953 GGA3Q9NZ52 723 aa17.32■□□□□ 0.36
SNHG17-208ENST00000456953 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
SNHG17-208ENST00000456953 DDX60Q8IY21 1712 aaKnown RBP17.32■□□□□ 0.36
SNHG17-208ENST00000456953 RTL9Q8NET4 1388 aa17.31■□□□□ 0.36
SNHG17-208ENST00000456953 C6orf229H3BNL8 230 aa17.31■□□□□ 0.36
SNHG17-208ENST00000456953 ECE2O60344 883 aa17.31■□□□□ 0.36
SNHG17-208ENST00000456953 ANXA1P04083 346 aa17.31■□□□□ 0.36
SNHG17-208ENST00000456953 TCIRG1Q13488 830 aa17.31■□□□□ 0.36
SNHG17-208ENST00000456953 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
SNHG17-208ENST00000456953 RASAL3Q86YV0 1011 aa17.31■□□□□ 0.36
SNHG17-208ENST00000456953 CDCA5Q96FF9 252 aa17.31■□□□□ 0.36
SNHG17-208ENST00000456953 EYA3Q99504 573 aa17.31■□□□□ 0.36
SNHG17-208ENST00000456953 MKI67P46013 3256 aaKnown RBP17.3■□□□□ 0.36
SNHG17-208ENST00000456953 RIMBP2O15034 1052 aa17.3■□□□□ 0.36
SNHG17-208ENST00000456953 FKBP1BP68106 108 aa17.3■□□□□ 0.36
SNHG17-208ENST00000456953 KCNQ5Q9NR82 932 aa17.3■□□□□ 0.36
SNHG17-208ENST00000456953 POLLQ9UGP5 575 aa17.3■□□□□ 0.36
SNHG17-208ENST00000456953 AIMP1Q12904 312 aaKnown RBP17.29■□□□□ 0.36
SNHG17-208ENST00000456953 XAGE3Q8WTP9 111 aa17.29■□□□□ 0.36
SNHG17-208ENST00000456953 HDAC9Q9UKV0 1011 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms