RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PCF11O94913 1555 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 TSC1Q92574 1164 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 LIMCH1Q9UPQ0 1083 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 MSH6P52701 1360 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 ASXL3Q9C0F0 2248 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 ATP11AP98196 1134 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 CRBNQ96SW2 442 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 NAP1L4Q99733 375 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 GSTTP1A0A1W2PQM5 241 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 SKILP12757 684 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 SOGA3Q5TF21 947 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 DZIP1Q86YF9 867 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 SMC1BQ8NDV3 1235 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 MYH14Q7Z406 1995 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 B4DLN1 442 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 MRPL12P52815 198 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 CCDC82Q8N4S0 544 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 EIF2AQ9BY44 585 aaKnown RBP5.95□□□□□ -1.46
CSMD3-204ENST00000455883 ZKSCAN5Q9Y2L8 839 aa5.95□□□□□ -1.46
CSMD3-204ENST00000455883 CCDC121Q6ZUS5 278 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 ARID3CA6NKF2 412 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 GMNNO75496 209 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 LMNB2Q03252 620 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 WHAMMP3Q1A5X7 153 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 DUOX2Q9NRD8 1548 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 CSB-PGBD3P0DP91 1061 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 MTMR3Q13615 1198 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 ZNF365Q70YC5 407 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 FCHSD1Q86WN1 690 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 KCNH8Q96L42 1107 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 UBAC1Q9BSL1 405 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 DRC3Q9H069 523 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 TTC31Q49AM3 519 aaPredicted RBP5.94□□□□□ -1.46
CSMD3-204ENST00000455883 RUBCNQ92622 972 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 DNMT1P26358 1616 aaKnown RBP5.94□□□□□ -1.46
CSMD3-204ENST00000455883 ABCA10Q8WWZ4 1543 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 GNAQP50148 359 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 FIBPO43427 364 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 ZFYVE27Q5T4F4 411 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 RUNDC3BQ96NL0 473 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 CHD1LQ86WJ1 897 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 CCDC65Q8IXS2 484 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 PNMA2Q9UL42 364 aa5.94□□□□□ -1.46
CSMD3-204ENST00000455883 RAPGEF6Q8TEU7 1601 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 CCDC69A6NI79 296 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 WDHD1O75717 1129 aaPredicted RBP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 ABCD1P33897 745 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 HDAC1Q13547 482 aaPredicted RBP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 PLEKHO1Q53GL0 409 aaPredicted RBP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 KIF6Q6ZMV9 814 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 A0A0G2JS52 829 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 ACTN4O43707 911 aaKnown RBP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 KIAA0753Q2KHM9 967 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 DDX23Q9BUQ8 820 aaKnown RBP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 MYO1AQ9UBC5 1043 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 SPTBN1Q01082 2364 aaKnown RBP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 TRAPPC8Q9Y2L5 1435 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 GFAPP14136 432 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 CNNM2Q9H8M5 875 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 TRIM35Q9UPQ4 493 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 MPHOSPH8Q99549 860 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 TCP11L1Q9NUJ3 509 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 PARP2Q9UGN5 583 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 SCAF11Q99590 1463 aaKnown RBP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 RTTNQ86VV8 2226 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 TDO2P48775 406 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 ADGRL1O94910 1474 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 LOXHD1Q8IVV2 1947 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 PABPN1LA6NDY0 278 aaKnown RBP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 KIF1CO43896 1103 aaKnown RBP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 TNNC1P63316 161 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 SEMA3FQ13275 785 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 FERMT2Q96AC1 680 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 PFDN4Q9NQP4 134 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 TRAK1Q9UPV9 953 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 CHD4Q14839 1912 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 CTAGE15A4D2H0 777 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 CTAGE8P0CG41 777 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 NBPF9Q3BBW0 867 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 SRGAP1Q7Z6B7 1085 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 CTAGE6Q86UF2 777 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 CTAGE4Q8IX94 777 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 TBC1D5Q92609 795 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 STMN2Q93045 179 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 CALML3P27482 149 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 ZMAT2Q96NC0 199 aaKnown RBP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 PPFIA4O75335 1185 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 KIF4BQ2VIQ3 1234 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 COG6Q9Y2V7 657 aa5.93□□□□□ -1.46
CSMD3-204ENST00000455883 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.93□□□□□ -1.46
CSMD3-204ENST00000455883 TNNT1P13805 278 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 BRAPQ7Z569 592 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 CNKSR2Q8WXI2 1034 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 LCMT1Q9UIC8 334 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 PATL2C9JE40 543 aaKnown RBP5.92□□□□□ -1.46
CSMD3-204ENST00000455883 ABCA1O95477 2261 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 ERO1AQ96HE7 468 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 ZWINTO95229 277 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 LRSAM1Q6UWE0 723 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 RAPGEF4Q8WZA2 1011 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms