RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
CLCN4-204ENST00000454850 HHIPL1Q96JK4 782 aa13.11□□□□□ -0.31
CLCN4-204ENST00000454850 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
CLCN4-204ENST00000454850 NEFMP07197 916 aa13.1□□□□□ -0.31
CLCN4-204ENST00000454850 HUNKP57058 714 aa13.1□□□□□ -0.31
CLCN4-204ENST00000454850 TNIP1Q15025 636 aa13.1□□□□□ -0.31
CLCN4-204ENST00000454850 PARP10Q53GL7 1025 aa13.1□□□□□ -0.31
CLCN4-204ENST00000454850 DLK2Q6UY11 383 aa13.1□□□□□ -0.31
CLCN4-204ENST00000454850 CDC37L1Q7L3B6 337 aa13.1□□□□□ -0.31
CLCN4-204ENST00000454850 MPNDQ8N594 471 aa13.1□□□□□ -0.31
CLCN4-204ENST00000454850 UTP14AQ9BVJ6 771 aaKnown RBP13.1□□□□□ -0.31
CLCN4-204ENST00000454850 VPS33BQ9H267 617 aa13.1□□□□□ -0.31
CLCN4-204ENST00000454850 LRRC37AA6NMS7 1700 aa13.1□□□□□ -0.31
CLCN4-204ENST00000454850 CDHR2Q9BYE9 1310 aa13.1□□□□□ -0.31
CLCN4-204ENST00000454850 KIAA2012Q0VF49 1180 aa13.09□□□□□ -0.31
CLCN4-204ENST00000454850 NOGQ13253 232 aa13.09□□□□□ -0.31
CLCN4-204ENST00000454850 USP48Q86UV5 1035 aa13.09□□□□□ -0.31
CLCN4-204ENST00000454850 DDX60Q8IY21 1712 aaKnown RBP13.09□□□□□ -0.31
CLCN4-204ENST00000454850 RTFDC1Q9BY42 306 aaPredicted RBP13.09□□□□□ -0.31
CLCN4-204ENST00000454850 DUOX1Q9NRD9 1551 aa13.09□□□□□ -0.31
CLCN4-204ENST00000454850 PGAP2Q9UHJ9 254 aa13.09□□□□□ -0.31
CLCN4-204ENST00000454850 CNOT7Q9UIV1 285 aaKnown RBP13.09□□□□□ -0.31
CLCN4-204ENST00000454850 ANXA1P04083 346 aa13.08□□□□□ -0.32
CLCN4-204ENST00000454850 HCLS1P14317 486 aaPredicted RBP13.08□□□□□ -0.32
CLCN4-204ENST00000454850 EIF2S2P20042 333 aaKnown RBP13.08□□□□□ -0.32
CLCN4-204ENST00000454850 SOX10P56693 466 aa13.08□□□□□ -0.32
CLCN4-204ENST00000454850 MICALL2Q8IY33 904 aa13.08□□□□□ -0.32
CLCN4-204ENST00000454850 ZC3H15Q8WU90 426 aaKnown RBP13.08□□□□□ -0.32
CLCN4-204ENST00000454850 ZNF428Q96B54 188 aa13.08□□□□□ -0.32
CLCN4-204ENST00000454850 YDJCA8MPS7 323 aa13.07□□□□□ -0.32
CLCN4-204ENST00000454850 H7C1D1 291 aa13.07□□□□□ -0.32
CLCN4-204ENST00000454850 BBOX1O75936 387 aa13.07□□□□□ -0.32
CLCN4-204ENST00000454850 PROSER3Q2NL68 480 aa13.07□□□□□ -0.32
CLCN4-204ENST00000454850 TBC1D10BQ4KMP7 808 aaPredicted RBP13.07□□□□□ -0.32
CLCN4-204ENST00000454850 DDX46Q7L014 1031 aaKnown RBP13.07□□□□□ -0.32
CLCN4-204ENST00000454850 SP8Q8IXZ3 490 aa13.07□□□□□ -0.32
CLCN4-204ENST00000454850 PCDH10Q9P2E7 1040 aa13.07□□□□□ -0.32
CLCN4-204ENST00000454850 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
CLCN4-204ENST00000454850 SCN9AQ15858 1988 aa13.07□□□□□ -0.32
CLCN4-204ENST00000454850 SLC10A5Q5PT55 438 aa13.06□□□□□ -0.32
CLCN4-204ENST00000454850 SAMD7Q7Z3H4 446 aa13.06□□□□□ -0.32
CLCN4-204ENST00000454850 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
CLCN4-204ENST00000454850 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
CLCN4-204ENST00000454850 ADM5C9JUS6 153 aa13.05□□□□□ -0.32
CLCN4-204ENST00000454850 PSMD14O00487 310 aa13.05□□□□□ -0.32
CLCN4-204ENST00000454850 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
CLCN4-204ENST00000454850 GRAPQ13588 217 aa13.05□□□□□ -0.32
CLCN4-204ENST00000454850 NFE2L2Q16236 605 aa13.05□□□□□ -0.32
CLCN4-204ENST00000454850 RBM26Q5T8P6 1007 aaKnown RBP13.05□□□□□ -0.32
CLCN4-204ENST00000454850 RGMBQ6NW40 437 aa13.05□□□□□ -0.32
CLCN4-204ENST00000454850 KRT26Q7Z3Y9 468 aa13.05□□□□□ -0.32
CLCN4-204ENST00000454850 GRAPLQ8TC17 118 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-204ENST00000454850 DBNDD1Q9H9R9 158 aa13.05□□□□□ -0.32
CLCN4-204ENST00000454850 GBA2Q9HCG7 927 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-204ENST00000454850 TRMT112Q9UI30 125 aaKnown RBP13.05□□□□□ -0.32
CLCN4-204ENST00000454850 TSPYL4Q9UJ04 414 aa13.05□□□□□ -0.32
CLCN4-204ENST00000454850 FAM155AB1AL88 458 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-204ENST00000454850 TRPA1O75762 1119 aa13.04□□□□□ -0.32
CLCN4-204ENST00000454850 EGFRP00533 1210 aa13.04□□□□□ -0.32
CLCN4-204ENST00000454850 ZNF157P51786 506 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-204ENST00000454850 KIF23Q02241 960 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-204ENST00000454850 PDIA6Q15084 440 aa13.04□□□□□ -0.32
CLCN4-204ENST00000454850 LRP10Q7Z4F1 713 aa13.04□□□□□ -0.32
CLCN4-204ENST00000454850 NLRP10Q86W26 655 aa13.04□□□□□ -0.32
CLCN4-204ENST00000454850 C2orf69Q8N8R5 385 aa13.04□□□□□ -0.32
CLCN4-204ENST00000454850 COL4A1P02462 1669 aa13.03□□□□□ -0.32
CLCN4-204ENST00000454850 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
CLCN4-204ENST00000454850 DCPSQ96C86 337 aaKnown RBP13.03□□□□□ -0.32
CLCN4-204ENST00000454850 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
CLCN4-204ENST00000454850 WASHC4Q2M389 1173 aa13.02□□□□□ -0.33
CLCN4-204ENST00000454850 HSP90AB3PQ58FF7 597 aa13.02□□□□□ -0.33
CLCN4-204ENST00000454850 COPS6Q7L5N1 327 aa13.02□□□□□ -0.33
CLCN4-204ENST00000454850 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.33
CLCN4-204ENST00000454850 PLEKHF1Q96S99 279 aa13.02□□□□□ -0.33
CLCN4-204ENST00000454850 RNF186Q9NXI6 227 aa13.02□□□□□ -0.33
CLCN4-204ENST00000454850 SAGE1Q9NXZ1 904 aa13.02□□□□□ -0.33
CLCN4-204ENST00000454850 SH3TC1Q8TE82 1336 aa13.02□□□□□ -0.33
CLCN4-204ENST00000454850 PSME4Q14997 1843 aa13.02□□□□□ -0.33
CLCN4-204ENST00000454850 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
CLCN4-204ENST00000454850 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
CLCN4-204ENST00000454850 DPF2Q92785 391 aa13.01□□□□□ -0.33
CLCN4-204ENST00000454850 CCDC102AQ96A19 550 aa13.01□□□□□ -0.33
CLCN4-204ENST00000454850 KCNQ5Q9NR82 932 aa13.01□□□□□ -0.33
CLCN4-204ENST00000454850 GGA3Q9NZ52 723 aa13.01□□□□□ -0.33
CLCN4-204ENST00000454850 NSFL1CQ9UNZ2 370 aaKnown RBP13.01□□□□□ -0.33
CLCN4-204ENST00000454850 ASTN2O75129 1339 aaPredicted RBP13□□□□□ -0.33
CLCN4-204ENST00000454850 ECE2O60344 883 aa13□□□□□ -0.33
CLCN4-204ENST00000454850 TCIRG1Q13488 830 aa13□□□□□ -0.33
CLCN4-204ENST00000454850 KIF4BQ2VIQ3 1234 aa13□□□□□ -0.33
CLCN4-204ENST00000454850 TMC4Q7Z404 712 aa13□□□□□ -0.33
CLCN4-204ENST00000454850 CELF1Q92879 486 aaKnown RBP13□□□□□ -0.33
CLCN4-204ENST00000454850 RTL9Q8NET4 1388 aa12.99□□□□□ -0.33
CLCN4-204ENST00000454850 SLC10A3P09131 477 aa12.99□□□□□ -0.33
CLCN4-204ENST00000454850 GPSM2P81274 684 aa12.99□□□□□ -0.33
CLCN4-204ENST00000454850 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
CLCN4-204ENST00000454850 SULF1Q8IWU6 871 aa12.99□□□□□ -0.33
CLCN4-204ENST00000454850 POLLQ9UGP5 575 aa12.99□□□□□ -0.33
CLCN4-204ENST00000454850 SPEF2Q9C093 1822 aa12.99□□□□□ -0.33
CLCN4-204ENST00000454850 RPS12P25398 132 aaKnown RBP12.98□□□□□ -0.33
CLCN4-204ENST00000454850 CTU1Q7Z7A3 348 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms