RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 AKAP4Q5JQC9 854 aa13.21□□□□□ -0.29
DDR1-240ENST00000454612 NCOA5Q9HCD5 579 aaKnown RBP13.21□□□□□ -0.29
DDR1-240ENST00000454612 NCOA3Q9Y6Q9 1424 aa13.21□□□□□ -0.29
DDR1-240ENST00000454612 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.3
DDR1-240ENST00000454612 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.3
DDR1-240ENST00000454612 SGSM2O43147 1006 aa13.21□□□□□ -0.3
DDR1-240ENST00000454612 TTC39AQ5SRH9 613 aa13.21□□□□□ -0.3
DDR1-240ENST00000454612 NUTM2AQ8IVF1 878 aaPredicted RBP13.21□□□□□ -0.3
DDR1-240ENST00000454612 CEP126Q9P2H0 1117 aa13.21□□□□□ -0.3
DDR1-240ENST00000454612 IGSF3O75054 1194 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 CREB3L3Q68CJ9 461 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 AXIN2Q9Y2T1 843 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 OVOS2A0A0J9YW53 1432 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 OVOS2Q6IE36 1432 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 SBNO1A3KN83 1393 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 JAK2O60674 1132 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
DDR1-240ENST00000454612 CCDC73Q6ZRK6 1079 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 NUP62CLQ9H1M0 184 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 AMOTQ4VCS5 1084 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 FAM177A1Q8N128 213 aaPredicted RBP13.2□□□□□ -0.3
DDR1-240ENST00000454612 EVI5LQ96CN4 794 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 ZDHHC9Q9Y397 364 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 CRB1P82279 1406 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 DACT1Q9NYF0 836 aa13.2□□□□□ -0.3
DDR1-240ENST00000454612 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
DDR1-240ENST00000454612 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
DDR1-240ENST00000454612 CCAR2Q8N163 923 aaKnown RBP13.19□□□□□ -0.3
DDR1-240ENST00000454612 BEND3Q5T5X7 828 aa13.19□□□□□ -0.3
DDR1-240ENST00000454612 STRCQ7RTU9 1775 aa13.19□□□□□ -0.3
DDR1-240ENST00000454612 TRDNQ13061 729 aa13.19□□□□□ -0.3
DDR1-240ENST00000454612 TRMT1Q9NXH9 659 aaKnown RBP13.19□□□□□ -0.3
DDR1-240ENST00000454612 NWD1Q149M9 1564 aa13.19□□□□□ -0.3
DDR1-240ENST00000454612 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 CCDC192P0DO97 292 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 ZNF790Q6PG37 636 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 Q6ZUG5 572 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 RUFY3Q7L099 469 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 LINS1Q8NG48 757 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 FAM89AQ96GI7 184 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 FMN2Q9NZ56 1722 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 MON2Q7Z3U7 1717 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 PES1O00541 588 aaKnown RBP13.18□□□□□ -0.3
DDR1-240ENST00000454612 HTATSF1O43719 755 aaKnown RBP13.18□□□□□ -0.3
DDR1-240ENST00000454612 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
DDR1-240ENST00000454612 F13A1P00488 732 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 APOBRQ0VD83 1088 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 SYNE3Q6ZMZ3 975 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 ME3Q16798 604 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
DDR1-240ENST00000454612 ADAMTS2O95450 1211 aa13.17□□□□□ -0.3
DDR1-240ENST00000454612 STK38Q15208 465 aa13.17□□□□□ -0.3
DDR1-240ENST00000454612 CCDC183Q5T5S1 534 aa13.17□□□□□ -0.3
DDR1-240ENST00000454612 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
DDR1-240ENST00000454612 MST1RQ04912 1400 aa13.17□□□□□ -0.3
DDR1-240ENST00000454612 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
DDR1-240ENST00000454612 TOM1O60784 492 aa13.17□□□□□ -0.3
DDR1-240ENST00000454612 KINO60870 393 aaKnown RBP13.17□□□□□ -0.3
DDR1-240ENST00000454612 SMC2O95347 1197 aa13.17□□□□□ -0.3
DDR1-240ENST00000454612 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
DDR1-240ENST00000454612 C16orf45Q96MC5 204 aaPredicted RBP13.17□□□□□ -0.3
DDR1-240ENST00000454612 NEK1Q96PY6 1258 aa13.17□□□□□ -0.3
DDR1-240ENST00000454612 KIF24Q5T7B8 1368 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 NUP133Q8WUM0 1156 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 TMX1Q9H3N1 280 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 ABCF2Q9UG63 623 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 TBC1D2BQ9UPU7 963 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 PEAK1Q9H792 1746 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 PDCP20941 246 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 MAP3K11Q16584 847 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 CCDC158Q5M9N0 1113 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 USP31Q70CQ4 1352 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 AK9Q5TCS8 1911 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 TPD52L1Q16890 204 aaPredicted RBP13.16□□□□□ -0.3
DDR1-240ENST00000454612 TTLL7Q6ZT98 887 aa13.16□□□□□ -0.3
DDR1-240ENST00000454612 IGSF1Q8N6C5 1336 aa13.15□□□□□ -0.3
DDR1-240ENST00000454612 SNRPA1P09661 255 aaKnown RBP13.15□□□□□ -0.3
DDR1-240ENST00000454612 EPHA10Q5JZY3 1008 aa13.15□□□□□ -0.3
DDR1-240ENST00000454612 ZNF589Q86UQ0 364 aaPredicted RBP13.15□□□□□ -0.3
DDR1-240ENST00000454612 DNAJC25Q9H1X3 360 aa13.15□□□□□ -0.3
DDR1-240ENST00000454612 BRD1O95696 1058 aa13.15□□□□□ -0.3
DDR1-240ENST00000454612 HSPA4P34932 840 aa13.15□□□□□ -0.3
DDR1-240ENST00000454612 TTLL5Q6EMB2 1281 aa13.15□□□□□ -0.3
DDR1-240ENST00000454612 DCCP43146 1447 aa13.15□□□□□ -0.3
DDR1-240ENST00000454612 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.15□□□□□ -0.31e-7■■■□□ 14.9
DDR1-240ENST00000454612 CCDC171Q6TFL3 1326 aa13.14□□□□□ -0.31
DDR1-240ENST00000454612 RASSF8Q8NHQ8 419 aa13.14□□□□□ -0.31
DDR1-240ENST00000454612 PRDM4Q9UKN5 801 aa13.14□□□□□ -0.31
DDR1-240ENST00000454612 TPCN1Q9ULQ1 816 aa13.14□□□□□ -0.31
DDR1-240ENST00000454612 RAD21O60216 631 aa13.14□□□□□ -0.31
DDR1-240ENST00000454612 VPS37DQ86XT2 251 aa13.14□□□□□ -0.31
DDR1-240ENST00000454612 ACSBG1Q96GR2 724 aa13.14□□□□□ -0.31
DDR1-240ENST00000454612 FTOQ9C0B1 505 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDR1-240ENST00000454612 DDX21Q9NR30 783 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDR1-240ENST00000454612 AKAP12Q02952 1782 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms