RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 ZKSCAN2Q63HK3 967 aa19.88■□□□□ 0.77
VCX3B-204ENST00000453306 CLUAP1Q96AJ1 413 aa19.88■□□□□ 0.77
VCX3B-204ENST00000453306 CACNA1SQ13698 1873 aa19.88■□□□□ 0.77
VCX3B-204ENST00000453306 ABCC4O15439 1325 aa19.87■□□□□ 0.77
VCX3B-204ENST00000453306 SLC4A10Q6U841 1118 aa19.87■□□□□ 0.77
VCX3B-204ENST00000453306 L3MBTL3Q96JM7 780 aaPredicted RBP19.87■□□□□ 0.77
VCX3B-204ENST00000453306 API5Q9BZZ5 524 aaKnown RBP19.87■□□□□ 0.77
VCX3B-204ENST00000453306 RNF123Q5XPI4 1314 aa19.86■□□□□ 0.77
VCX3B-204ENST00000453306 NTSR2O95665 410 aa19.86■□□□□ 0.77
VCX3B-204ENST00000453306 HSP90AB3PQ58FF7 597 aa19.86■□□□□ 0.77
VCX3B-204ENST00000453306 TNS4Q8IZW8 715 aa19.86■□□□□ 0.77
VCX3B-204ENST00000453306 LINS1Q8NG48 757 aa19.86■□□□□ 0.77
VCX3B-204ENST00000453306 PANK1Q8TE04 598 aa19.86■□□□□ 0.77
VCX3B-204ENST00000453306 CREBZFQ9NS37 354 aa19.86■□□□□ 0.77
VCX3B-204ENST00000453306 IPO8O15397 1037 aaKnown RBP19.85■□□□□ 0.77
VCX3B-204ENST00000453306 LDHDQ86WU2 507 aa19.85■□□□□ 0.77
VCX3B-204ENST00000453306 ZNF277Q9NRM2 450 aaPredicted RBP19.85■□□□□ 0.77
VCX3B-204ENST00000453306 GCKRQ14397 625 aa19.84■□□□□ 0.77
VCX3B-204ENST00000453306 GRIPAP1Q4V328 841 aa19.84■□□□□ 0.77
VCX3B-204ENST00000453306 INTS3Q68E01 1043 aaKnown RBP19.84■□□□□ 0.77
VCX3B-204ENST00000453306 CC2D2BQ6DHV5 1058 aa19.84■□□□□ 0.77
VCX3B-204ENST00000453306 NUTM1Q86Y26 1132 aa19.84■□□□□ 0.77
VCX3B-204ENST00000453306 TMEM57Q8N5G2 664 aa19.84■□□□□ 0.77
VCX3B-204ENST00000453306 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
VCX3B-204ENST00000453306 IARSP41252 1262 aaKnown RBP19.83■□□□□ 0.77
VCX3B-204ENST00000453306 CASP7P55210 303 aa19.83■□□□□ 0.77
VCX3B-204ENST00000453306 RRP1P56182 461 aaKnown RBP19.83■□□□□ 0.77
VCX3B-204ENST00000453306 CRY2Q49AN0 593 aa19.83■□□□□ 0.77
VCX3B-204ENST00000453306 PARP10Q53GL7 1025 aa19.83■□□□□ 0.77
VCX3B-204ENST00000453306 CCDC191Q8NCU4 936 aa19.83■□□□□ 0.77
VCX3B-204ENST00000453306 RPGRQ92834 1020 aaKnown RBP19.83■□□□□ 0.77
VCX3B-204ENST00000453306 TAF1DQ9H5J8 278 aaPredicted RBP19.83■□□□□ 0.77
VCX3B-204ENST00000453306 IBTKQ9P2D0 1353 aaPredicted RBP19.83■□□□□ 0.76
VCX3B-204ENST00000453306 H7C1W4 665 aa19.82■□□□□ 0.76
VCX3B-204ENST00000453306 HSPA1AP0DMV8 641 aaKnown RBP19.82■□□□□ 0.76
VCX3B-204ENST00000453306 HSPA1BP0DMV9 641 aaKnown RBP19.82■□□□□ 0.76
VCX3B-204ENST00000453306 RTL5Q5HYW3 569 aaPredicted RBP19.82■□□□□ 0.76
VCX3B-204ENST00000453306 DZIP1LQ8IYY4 767 aaKnown RBP19.82■□□□□ 0.76
VCX3B-204ENST00000453306 JDP2Q8WYK2 163 aa19.82■□□□□ 0.76
VCX3B-204ENST00000453306 FAM89AQ96GI7 184 aa19.82■□□□□ 0.76
VCX3B-204ENST00000453306 PSMD1Q99460 953 aa19.82■□□□□ 0.76
VCX3B-204ENST00000453306 UTP14AQ9BVJ6 771 aaKnown RBP19.82■□□□□ 0.76
VCX3B-204ENST00000453306 SRCIN1Q9C0H9 1055 aa19.82■□□□□ 0.76
VCX3B-204ENST00000453306 CWC25Q9NXE8 425 aaPredicted RBP19.82■□□□□ 0.76
VCX3B-204ENST00000453306 HACL1Q9UJ83 578 aa19.82■□□□□ 0.76
VCX3B-204ENST00000453306 NUP98P52948 1817 aa19.81■□□□□ 0.76
VCX3B-204ENST00000453306 ALDH1L1O75891 902 aa19.81■□□□□ 0.76
VCX3B-204ENST00000453306 NEXNQ0ZGT2 675 aa19.81■□□□□ 0.76
VCX3B-204ENST00000453306 C3orf67Q6ZVT6 689 aa19.81■□□□□ 0.76
VCX3B-204ENST00000453306 USP44Q9H0E7 712 aa19.81■□□□□ 0.76
VCX3B-204ENST00000453306 ABCC12Q96J65 1359 aa19.81■□□□□ 0.76
VCX3B-204ENST00000453306 SCN4AP35499 1836 aa19.81■□□□□ 0.76
VCX3B-204ENST00000453306 RIC1Q4ADV7 1423 aa19.8■□□□□ 0.76
VCX3B-204ENST00000453306 POTEIP0CG38 1075 aa19.8■□□□□ 0.76
VCX3B-204ENST00000453306 POTEJP0CG39 1038 aa19.8■□□□□ 0.76
VCX3B-204ENST00000453306 EAPPQ56P03 285 aaPredicted RBP19.8■□□□□ 0.76
VCX3B-204ENST00000453306 OLFM4Q6UX06 510 aa19.8■□□□□ 0.76
VCX3B-204ENST00000453306 PPP1R42Q7Z4L9 355 aa19.8■□□□□ 0.76
VCX3B-204ENST00000453306 PNMA8AQ86V59 439 aaPredicted RBP19.8■□□□□ 0.76
VCX3B-204ENST00000453306 RBM17Q96I25 401 aaKnown RBP19.8■□□□□ 0.76
VCX3B-204ENST00000453306 TRMT112Q9UI30 125 aaKnown RBP19.8■□□□□ 0.76
VCX3B-204ENST00000453306 ZNF541Q9H0D2 1346 aa19.79■□□□□ 0.76
VCX3B-204ENST00000453306 FZD9O00144 591 aa19.79■□□□□ 0.76
VCX3B-204ENST00000453306 PCCAP05165 728 aaPredicted RBP19.79■□□□□ 0.76
VCX3B-204ENST00000453306 NBPF7P0C2Y1 421 aaPredicted RBP19.79■□□□□ 0.76
VCX3B-204ENST00000453306 HOXA10P31260 410 aaPredicted RBP19.79■□□□□ 0.76
VCX3B-204ENST00000453306 SLC10A5Q5PT55 438 aa19.79■□□□□ 0.76
VCX3B-204ENST00000453306 GPC2Q8N158 579 aa19.79■□□□□ 0.76
VCX3B-204ENST00000453306 ZBTB38Q8NAP3 1195 aaPredicted RBP19.79■□□□□ 0.76
VCX3B-204ENST00000453306 TMX4Q9H1E5 349 aaPredicted RBP19.79■□□□□ 0.76
VCX3B-204ENST00000453306 CLEC11AQ9Y240 323 aa19.79■□□□□ 0.76
VCX3B-204ENST00000453306 CACNA1FO60840 1977 aa19.79■□□□□ 0.76
VCX3B-204ENST00000453306 HCLS1P14317 486 aaPredicted RBP19.78■□□□□ 0.76
VCX3B-204ENST00000453306 EPHX2P34913 555 aa19.78■□□□□ 0.76
VCX3B-204ENST00000453306 CCT4P50991 539 aaKnown RBP19.78■□□□□ 0.76
VCX3B-204ENST00000453306 EIF6P56537 245 aaKnown RBP19.78■□□□□ 0.76
VCX3B-204ENST00000453306 KAZALD1Q96I82 304 aa19.78■□□□□ 0.76
VCX3B-204ENST00000453306 MKRN1Q9UHC7 482 aaKnown RBP19.78■□□□□ 0.76
VCX3B-204ENST00000453306 PCNTO95613 3336 aa19.78■□□□□ 0.76
VCX3B-204ENST00000453306 UTYO14607 1347 aa19.77■□□□□ 0.76
VCX3B-204ENST00000453306 PDE3AQ14432 1141 aa19.77■□□□□ 0.76
VCX3B-204ENST00000453306 EPHA10Q5JZY3 1008 aa19.77■□□□□ 0.76
VCX3B-204ENST00000453306 UBE3BQ7Z3V4 1068 aa19.77■□□□□ 0.76
VCX3B-204ENST00000453306 CRAMP1Q96RY5 1269 aa19.77■□□□□ 0.76
VCX3B-204ENST00000453306 MEIS3Q99687 375 aa19.77■□□□□ 0.76
VCX3B-204ENST00000453306 COG6Q9Y2V7 657 aa19.77■□□□□ 0.76
VCX3B-204ENST00000453306 PASKQ96RG2 1323 aa19.76■□□□□ 0.75
VCX3B-204ENST00000453306 TMEM88BA6NKF7 163 aa19.76■□□□□ 0.75
VCX3B-204ENST00000453306 GRM8O00222 908 aa19.76■□□□□ 0.75
VCX3B-204ENST00000453306 NLRP3Q96P20 1036 aa19.76■□□□□ 0.75
VCX3B-204ENST00000453306 SH3TC1Q8TE82 1336 aa19.76■□□□□ 0.75
VCX3B-204ENST00000453306 CNTNAP1P78357 1384 aa19.75■□□□□ 0.75
VCX3B-204ENST00000453306 IRS4O14654 1257 aaPredicted RBP19.75■□□□□ 0.75
VCX3B-204ENST00000453306 PPEF1O14829 653 aaPredicted RBP19.75■□□□□ 0.75
VCX3B-204ENST00000453306 ZBTB7BO15156 539 aaPredicted RBP19.75■□□□□ 0.75
VCX3B-204ENST00000453306 SUCLG2Q96I99 432 aa19.75■□□□□ 0.75
VCX3B-204ENST00000453306 LMOD1P29536 600 aaPredicted RBP19.74■□□□□ 0.75
VCX3B-204ENST00000453306 ITGBL1O95965 494 aaPredicted RBP19.73■□□□□ 0.75
VCX3B-204ENST00000453306 FOXO4P98177 505 aa19.73■□□□□ 0.75
VCX3B-204ENST00000453306 FTSJ3Q8IY81 847 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms