RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 FAM69CQ0P6D2 419 aa9.57□□□□□ -0.88
SCN3A-205ENST00000453007 PNMA5Q96PV4 448 aa9.57□□□□□ -0.88
SCN3A-205ENST00000453007 IGFLR1Q9H665 355 aa9.57□□□□□ -0.88
SCN3A-205ENST00000453007 QTRT2Q9H974 415 aaKnown RBP9.57□□□□□ -0.88
SCN3A-205ENST00000453007 NOP53Q9NZM5 478 aaKnown RBP9.57□□□□□ -0.88
SCN3A-205ENST00000453007 CFTRP13569 1480 aa9.57□□□□□ -0.88
SCN3A-205ENST00000453007 EPB42P16452 691 aa9.56□□□□□ -0.88
SCN3A-205ENST00000453007 COL8A1P27658 744 aa9.56□□□□□ -0.88
SCN3A-205ENST00000453007 ALYREFQ86V81 257 aaKnown RBP9.56□□□□□ -0.88
SCN3A-205ENST00000453007 TNFRSF25Q93038 417 aa9.56□□□□□ -0.88
SCN3A-205ENST00000453007 BCS1LQ9Y276 419 aa9.56□□□□□ -0.88
SCN3A-205ENST00000453007 ADARB2-AS1A8MUL3 147 aa9.55□□□□□ -0.88
SCN3A-205ENST00000453007 ADH7P40394 386 aa9.55□□□□□ -0.88
SCN3A-205ENST00000453007 IDH3AP50213 366 aa9.55□□□□□ -0.88
SCN3A-205ENST00000453007 FKBP5Q13451 457 aaPredicted RBP9.55□□□□□ -0.88
SCN3A-205ENST00000453007 UBE2OQ9C0C9 1292 aaKnown RBP9.55□□□□□ -0.88
SCN3A-205ENST00000453007 PDS5BQ9NTI5 1447 aa9.55□□□□□ -0.88
SCN3A-205ENST00000453007 MSTNO14793 375 aa9.54□□□□□ -0.88
SCN3A-205ENST00000453007 ATP2B4P23634 1241 aa9.54□□□□□ -0.88
SCN3A-205ENST00000453007 ARID4AP29374 1257 aaPredicted RBP9.54□□□□□ -0.88
SCN3A-205ENST00000453007 C11orf91Q3C1V1 193 aa9.54□□□□□ -0.88
SCN3A-205ENST00000453007 LAMC3Q9Y6N6 1575 aa9.54□□□□□ -0.88
SCN3A-205ENST00000453007 CUX2O14529 1486 aa9.53□□□□□ -0.88
SCN3A-205ENST00000453007 KRBA1A5PL33 1030 aa9.53□□□□□ -0.88
SCN3A-205ENST00000453007 CCINQ13939 588 aa9.53□□□□□ -0.88
SCN3A-205ENST00000453007 MYO19Q96H55 970 aa9.53□□□□□ -0.88
SCN3A-205ENST00000453007 DMGDHQ9UI17 866 aaKnown RBP9.53□□□□□ -0.88
SCN3A-205ENST00000453007 THOC2Q8NI27 1593 aaKnown RBP9.53□□□□□ -0.88
SCN3A-205ENST00000453007 FANCD2Q9BXW9 1451 aa9.53□□□□□ -0.88
SCN3A-205ENST00000453007 M0R082 166 aa9.52□□□□□ -0.89
SCN3A-205ENST00000453007 ARSDP51689 593 aa9.52□□□□□ -0.89
SCN3A-205ENST00000453007 ZNF417Q8TAU3 575 aa9.52□□□□□ -0.89
SCN3A-205ENST00000453007 ZNF587Q96SQ5 575 aaPredicted RBP9.52□□□□□ -0.89
SCN3A-205ENST00000453007 MDFIQ99750 246 aa9.52□□□□□ -0.89
SCN3A-205ENST00000453007 PLVAPQ9BX97 442 aa9.52□□□□□ -0.89
SCN3A-205ENST00000453007 MICAL2O94851 1124 aa9.51□□□□□ -0.89
SCN3A-205ENST00000453007 NFKB1P19838 968 aa9.51□□□□□ -0.89
SCN3A-205ENST00000453007 IFT43Q96FT9 208 aa9.51□□□□□ -0.89
SCN3A-205ENST00000453007 GSX2Q9BZM3 304 aa9.51□□□□□ -0.89
SCN3A-205ENST00000453007 EFCC1Q9HA90 598 aa9.51□□□□□ -0.89
SCN3A-205ENST00000453007 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.51□□□□□ -0.89
SCN3A-205ENST00000453007 ALBP02768 609 aa9.5□□□□□ -0.89
SCN3A-205ENST00000453007 INPP5BP32019 993 aa9.5□□□□□ -0.89
SCN3A-205ENST00000453007 SERPINB4P48594 390 aa9.5□□□□□ -0.89
SCN3A-205ENST00000453007 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
SCN3A-205ENST00000453007 TRIM11Q96F44 468 aa9.5□□□□□ -0.89
SCN3A-205ENST00000453007 SPOCK3Q9BQ16 436 aa9.5□□□□□ -0.89
SCN3A-205ENST00000453007 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
SCN3A-205ENST00000453007 CXXC1Q9P0U4 656 aaPredicted RBP9.5□□□□□ -0.89
SCN3A-205ENST00000453007 LRFN2Q9ULH4 789 aa9.5□□□□□ -0.89
SCN3A-205ENST00000453007 URB2Q14146 1524 aaKnown RBP9.5□□□□□ -0.89
SCN3A-205ENST00000453007 KIF21AQ7Z4S6 1674 aa9.49□□□□□ -0.89
SCN3A-205ENST00000453007 MRC2Q9UBG0 1479 aa9.49□□□□□ -0.89
SCN3A-205ENST00000453007 ITGB2P05107 769 aa9.49□□□□□ -0.89
SCN3A-205ENST00000453007 SCNN1AP37088 669 aa9.49□□□□□ -0.89
SCN3A-205ENST00000453007 OCLNQ16625 522 aa9.49□□□□□ -0.89
SCN3A-205ENST00000453007 STARD13Q9Y3M8 1113 aa9.49□□□□□ -0.89
SCN3A-205ENST00000453007 SOWAHDA6NJG2 315 aa9.48□□□□□ -0.89
SCN3A-205ENST00000453007 SPDYE3A6NKU9 549 aa9.48□□□□□ -0.89
SCN3A-205ENST00000453007 COX20Q5RI15 118 aa9.48□□□□□ -0.89
SCN3A-205ENST00000453007 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
SCN3A-205ENST00000453007 TREML1Q86YW5 311 aa9.48□□□□□ -0.89
SCN3A-205ENST00000453007 MICALL1Q8N3F8 863 aa9.48□□□□□ -0.89
SCN3A-205ENST00000453007 DNAJB12Q9NXW2 375 aaKnown RBP9.48□□□□□ -0.89
SCN3A-205ENST00000453007 SLC6A14Q9UN76 642 aa9.48□□□□□ -0.89
SCN3A-205ENST00000453007 USP20Q9Y2K6 914 aa9.47□□□□□ -0.89
SCN3A-205ENST00000453007 CEP164Q9UPV0 1460 aa9.47□□□□□ -0.89
SCN3A-205ENST00000453007 UNCXA6NJT0 531 aa9.46□□□□□ -0.9
SCN3A-205ENST00000453007 GRNP28799 593 aaKnown RBP9.46□□□□□ -0.9
SCN3A-205ENST00000453007 PRRT3Q5FWE3 981 aa9.46□□□□□ -0.9
SCN3A-205ENST00000453007 C16orf46Q6P387 395 aa9.46□□□□□ -0.9
SCN3A-205ENST00000453007 DNAJC14Q6Y2X3 702 aaPredicted RBP9.46□□□□□ -0.9
SCN3A-205ENST00000453007 RGL4Q8IZJ4 473 aa9.46□□□□□ -0.9
SCN3A-205ENST00000453007 CMTR1Q8N1G2 835 aaKnown RBP9.46□□□□□ -0.9
SCN3A-205ENST00000453007 LILRB5O75023 590 aa9.45□□□□□ -0.9
SCN3A-205ENST00000453007 PTCD1O75127 700 aaKnown RBP9.45□□□□□ -0.9
SCN3A-205ENST00000453007 SASH3O75995 380 aa9.45□□□□□ -0.9
SCN3A-205ENST00000453007 PROCP04070 461 aa9.45□□□□□ -0.9
SCN3A-205ENST00000453007 RARAP10276 462 aa9.45□□□□□ -0.9
SCN3A-205ENST00000453007 NAA30Q147X3 362 aaPredicted RBP9.45□□□□□ -0.9
SCN3A-205ENST00000453007 NUDT8Q8WV74 236 aa9.45□□□□□ -0.9
SCN3A-205ENST00000453007 SAP130Q9H0E3 1048 aa9.45□□□□□ -0.9
SCN3A-205ENST00000453007 JPH1Q9HDC5 661 aaPredicted RBP9.45□□□□□ -0.9
SCN3A-205ENST00000453007 RTCBQ9Y3I0 505 aaKnown RBP9.45□□□□□ -0.9
SCN3A-205ENST00000453007 RBM47A0AV96 593 aaKnown RBP9.44□□□□□ -0.9
SCN3A-205ENST00000453007 C1QTNF9BB2RNN3 333 aa9.44□□□□□ -0.9
SCN3A-205ENST00000453007 SPATA31C1P0DKV0 1188 aa9.44□□□□□ -0.9
SCN3A-205ENST00000453007 BRD2P25440 801 aaKnown RBP9.44□□□□□ -0.9
SCN3A-205ENST00000453007 TARSP26639 723 aaKnown RBP9.44□□□□□ -0.9
SCN3A-205ENST00000453007 PRDM6Q9NQX0 595 aa9.44□□□□□ -0.9
SCN3A-205ENST00000453007 WDR62O43379 1518 aa9.44□□□□□ -0.9
SCN3A-205ENST00000453007 OPLAHO14841 1288 aa9.43□□□□□ -0.9
SCN3A-205ENST00000453007 PCSK7Q16549 785 aa9.43□□□□□ -0.9
SCN3A-205ENST00000453007 NOM1Q5C9Z4 860 aaKnown RBP9.43□□□□□ -0.9
SCN3A-205ENST00000453007 PSAPL1Q6NUJ1 521 aa9.43□□□□□ -0.9
SCN3A-205ENST00000453007 C20orf204Q6ZNR8 217 aa9.43□□□□□ -0.9
SCN3A-205ENST00000453007 CAPN12Q6ZSI9 719 aa9.43□□□□□ -0.9
SCN3A-205ENST00000453007 CD163Q86VB7 1156 aa9.43□□□□□ -0.9
SCN3A-205ENST00000453007 COL26A1Q96A83 441 aa9.43□□□□□ -0.9
SCN3A-205ENST00000453007 ZFATQ9P243 1243 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms