RNA–Protein interactions for RNA: ENST00000450299.6

CCDC196-206, Transcript of coiled-coil domain containing 196, humanhuman

TSL 3

Gene CCDC196, Length 722 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-206ENST00000450299 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
CCDC196-206ENST00000450299 MSL1Q68DK7 614 aa8.6□□□□□ -1.03
CCDC196-206ENST00000450299 SVOPQ8N4V2 548 aa8.6□□□□□ -1.03
CCDC196-206ENST00000450299 NANOS1Q8WY41 292 aaKnown RBP8.6□□□□□ -1.03
CCDC196-206ENST00000450299 C10orf71Q711Q0 1435 aa8.6□□□□□ -1.03
CCDC196-206ENST00000450299 ANKRD50Q9ULJ7 1429 aa8.6□□□□□ -1.03
CCDC196-206ENST00000450299 GPRASP1Q5JY77 1395 aa8.6□□□□□ -1.03
CCDC196-206ENST00000450299 LMO7Q8WWI1 1683 aa8.59□□□□□ -1.03
CCDC196-206ENST00000450299 PTSQ03393 145 aa8.59□□□□□ -1.03
CCDC196-206ENST00000450299 RNFT1Q5M7Z0 435 aa8.59□□□□□ -1.03
CCDC196-206ENST00000450299 TSEN34Q9BSV6 310 aaKnown RBP8.59□□□□□ -1.03
CCDC196-206ENST00000450299 KCPQ6ZWJ8 1503 aa8.59□□□□□ -1.03
CCDC196-206ENST00000450299 BTAF1O14981 1849 aa8.59□□□□□ -1.03
CCDC196-206ENST00000450299 PXDNLA1KZ92 1463 aa8.58□□□□□ -1.04
CCDC196-206ENST00000450299 ARHGEF15O94989 841 aa8.58□□□□□ -1.04
CCDC196-206ENST00000450299 AGERQ15109 404 aa8.58□□□□□ -1.04
CCDC196-206ENST00000450299 WHAMMQ8TF30 809 aa8.58□□□□□ -1.04
CCDC196-206ENST00000450299 HIRIP3Q9BW71 556 aaPredicted RBP8.58□□□□□ -1.04
CCDC196-206ENST00000450299 MAP10Q9P2G4 905 aa8.58□□□□□ -1.04
CCDC196-206ENST00000450299 NHSQ6T4R5 1651 aa8.58□□□□□ -1.04
CCDC196-206ENST00000450299 BRD4O60885 1362 aaPredicted RBP8.58□□□□□ -1.04
CCDC196-206ENST00000450299 KDM2BQ8NHM5 1336 aa8.57□□□□□ -1.04
CCDC196-206ENST00000450299 ACIN1Q9UKV3 1341 aaKnown RBP8.57□□□□□ -1.04
CCDC196-206ENST00000450299 KIF1BO60333 1816 aa8.57□□□□□ -1.04
CCDC196-206ENST00000450299 WNK3Q9BYP7 1800 aa8.57□□□□□ -1.04
CCDC196-206ENST00000450299 CRB1P82279 1406 aa8.57□□□□□ -1.04
CCDC196-206ENST00000450299 TNRC6CQ9HCJ0 1690 aaKnown RBP8.57□□□□□ -1.04
CCDC196-206ENST00000450299 TTLL8A6PVC2 850 aa8.57□□□□□ -1.04
CCDC196-206ENST00000450299 F12P00748 615 aaPredicted RBP8.57□□□□□ -1.04
CCDC196-206ENST00000450299 SLURP2P0DP57 97 aa8.57□□□□□ -1.04
CCDC196-206ENST00000450299 HSPA8P11142 646 aaKnown RBP8.57□□□□□ -1.04
CCDC196-206ENST00000450299 ACSBG1Q96GR2 724 aa8.57□□□□□ -1.04
CCDC196-206ENST00000450299 COL5A2P05997 1499 aaPredicted RBP8.57□□□□□ -1.04
CCDC196-206ENST00000450299 FOXK2Q01167 660 aa8.56□□□□□ -1.04
CCDC196-206ENST00000450299 KANK3Q6NY19 840 aa8.56□□□□□ -1.04
CCDC196-206ENST00000450299 BPHLQ86WA6 291 aaPredicted RBP8.56□□□□□ -1.04
CCDC196-206ENST00000450299 COL23A1Q86Y22 540 aaPredicted RBP8.56□□□□□ -1.04
CCDC196-206ENST00000450299 VIRMAQ69YN4 1812 aaKnown RBP8.56□□□□□ -1.04
CCDC196-206ENST00000450299 KNDC1Q76NI1 1749 aa8.55□□□□□ -1.04
CCDC196-206ENST00000450299 NUTM2GQ5VZR2 741 aa8.55□□□□□ -1.04
CCDC196-206ENST00000450299 ARHGAP27Q6ZUM4 889 aa8.55□□□□□ -1.04
CCDC196-206ENST00000450299 CCDC155Q8N6L0 562 aa8.55□□□□□ -1.04
CCDC196-206ENST00000450299 ABCC11Q96J66 1382 aa8.55□□□□□ -1.04
CCDC196-206ENST00000450299 ANKRD30BQ9BXX2 1392 aa8.55□□□□□ -1.04
CCDC196-206ENST00000450299 PKD1L3Q7Z443 1732 aa8.54□□□□□ -1.04
CCDC196-206ENST00000450299 PLEKHG2Q9H7P9 1386 aa8.54□□□□□ -1.04
CCDC196-206ENST00000450299 FIGNL2A6NMB9 653 aa8.54□□□□□ -1.04
CCDC196-206ENST00000450299 CFAP99D6REC4 459 aa8.54□□□□□ -1.04
CCDC196-206ENST00000450299 MARSP56192 900 aaKnown RBP8.54□□□□□ -1.04
CCDC196-206ENST00000450299 KCNQ4P56696 695 aa8.54□□□□□ -1.04
CCDC196-206ENST00000450299 XP32Q5T750 250 aa8.54□□□□□ -1.04
CCDC196-206ENST00000450299 C9orf131Q5VYM1 1079 aa8.54□□□□□ -1.04
CCDC196-206ENST00000450299 CNTNAP1P78357 1384 aa8.53□□□□□ -1.04
CCDC196-206ENST00000450299 TULP1O00294 542 aaPredicted RBP8.53□□□□□ -1.04
CCDC196-206ENST00000450299 FSHRP23945 695 aa8.53□□□□□ -1.04
CCDC196-206ENST00000450299 GJA5P36382 358 aa8.53□□□□□ -1.04
CCDC196-206ENST00000450299 SLC27A3Q5K4L6 730 aa8.53□□□□□ -1.04
CCDC196-206ENST00000450299 TMEM132EQ6IEE7 984 aa8.53□□□□□ -1.04
CCDC196-206ENST00000450299 USP6P35125 1406 aa8.53□□□□□ -1.04
CCDC196-206ENST00000450299 CPDO75976 1380 aa8.52□□□□□ -1.05
CCDC196-206ENST00000450299 EXOC5O00471 708 aa8.52□□□□□ -1.05
CCDC196-206ENST00000450299 TOM1L2Q6ZVM7 507 aa8.52□□□□□ -1.05
CCDC196-206ENST00000450299 SCARF2Q96GP6 870 aaPredicted RBP8.52□□□□□ -1.05
CCDC196-206ENST00000450299 CDCA7Q9BWT1 371 aaPredicted RBP8.52□□□□□ -1.05
CCDC196-206ENST00000450299 C1QTNF2Q9BXJ5 285 aa8.52□□□□□ -1.05
CCDC196-206ENST00000450299 EMILIN1Q9Y6C2 1016 aa8.52□□□□□ -1.05
CCDC196-206ENST00000450299 PPLO60437 1756 aa8.52□□□□□ -1.05
CCDC196-206ENST00000450299 ANKARQ7Z5J8 1434 aa8.52□□□□□ -1.05
CCDC196-206ENST00000450299 PIK3C2AO00443 1686 aa8.51□□□□□ -1.05
CCDC196-206ENST00000450299 SLC35F4A4IF30 521 aa8.51□□□□□ -1.05
CCDC196-206ENST00000450299 VWA5B2Q8N398 1253 aa8.51□□□□□ -1.05
CCDC196-206ENST00000450299 NGDNQ8NEJ9 315 aaKnown RBP8.51□□□□□ -1.05
CCDC196-206ENST00000450299 BCS1LQ9Y276 419 aa8.51□□□□□ -1.05
CCDC196-206ENST00000450299 MAP4K5Q9Y4K4 846 aa8.51□□□□□ -1.05
CCDC196-206ENST00000450299 PCDHB15Q9Y5E8 787 aa8.51□□□□□ -1.05
CCDC196-206ENST00000450299 SBF1O95248 1867 aa8.51□□□□□ -1.05
CCDC196-206ENST00000450299 TRPM1Q7Z4N2 1603 aa8.51□□□□□ -1.05
CCDC196-206ENST00000450299 N4BP2Q86UW6 1770 aaPredicted RBP8.5□□□□□ -1.05
CCDC196-206ENST00000450299 CUL9Q8IWT3 2517 aa8.5□□□□□ -1.05
CCDC196-206ENST00000450299 ITGA6P23229 1130 aa8.5□□□□□ -1.05
CCDC196-206ENST00000450299 KANK4Q5T7N3 995 aaPredicted RBP8.5□□□□□ -1.05
CCDC196-206ENST00000450299 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
CCDC196-206ENST00000450299 VASH1Q7L8A9 365 aaPredicted RBP8.5□□□□□ -1.05
CCDC196-206ENST00000450299 CCDC116Q8IYX3 515 aa8.5□□□□□ -1.05
CCDC196-206ENST00000450299 CASP8AP2Q9UKL3 1982 aa8.5□□□□□ -1.05
CCDC196-206ENST00000450299 NUP155O75694 1391 aa8.49□□□□□ -1.05
CCDC196-206ENST00000450299 COL18A1P39060 1754 aa8.49□□□□□ -1.05
CCDC196-206ENST00000450299 SAFB2Q14151 953 aaKnown RBP eCLIP8.49□□□□□ -1.05
CCDC196-206ENST00000450299 HABP4Q5JVS0 413 aaKnown RBP8.49□□□□□ -1.05
CCDC196-206ENST00000450299 SV2AQ7L0J3 742 aa8.49□□□□□ -1.05
CCDC196-206ENST00000450299 SH3RF1Q7Z6J0 888 aa8.49□□□□□ -1.05
CCDC196-206ENST00000450299 GCC1Q96CN9 775 aa8.49□□□□□ -1.05
CCDC196-206ENST00000450299 MCOLN1Q9GZU1 580 aa8.49□□□□□ -1.05
CCDC196-206ENST00000450299 RPGRIP1LQ68CZ1 1315 aa8.49□□□□□ -1.05
CCDC196-206ENST00000450299 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
CCDC196-206ENST00000450299 SPINT1O43278 529 aa8.48□□□□□ -1.05
CCDC196-206ENST00000450299 VEGFAP15692 232 aaPredicted RBP8.48□□□□□ -1.05
CCDC196-206ENST00000450299 TRMT44Q8IYL2 757 aaKnown RBP8.48□□□□□ -1.05
CCDC196-206ENST00000450299 SIRT1Q96EB6 747 aa8.48□□□□□ -1.05
CCDC196-206ENST00000450299 BEGAINQ9BUH8 593 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms