RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 TTLL11Q8NHH1 800 aa14.88□□□□□ -0.03
RCL1-208ENST00000448872 GREM2Q9H772 168 aa14.88□□□□□ -0.03
RCL1-208ENST00000448872 WWC3Q9ULE0 1092 aa14.88□□□□□ -0.03
RCL1-208ENST00000448872 NRXN2Q9P2S2 1712 aa14.87□□□□□ -0.03
RCL1-208ENST00000448872 CACNA1FO60840 1977 aa14.87□□□□□ -0.03
RCL1-208ENST00000448872 PDE6BP35913 854 aa14.87□□□□□ -0.03
RCL1-208ENST00000448872 SF3B3Q15393 1217 aaKnown RBP14.87□□□□□ -0.03
RCL1-208ENST00000448872 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
RCL1-208ENST00000448872 CRY2Q49AN0 593 aa14.87□□□□□ -0.03
RCL1-208ENST00000448872 SLC51AQ86UW1 340 aa14.87□□□□□ -0.03
RCL1-208ENST00000448872 SEC31BQ9NQW1 1179 aa14.87□□□□□ -0.03
RCL1-208ENST00000448872 CD2APQ9Y5K6 639 aa14.87□□□□□ -0.03
RCL1-208ENST00000448872 CSF1RP07333 972 aa14.86□□□□□ -0.03
RCL1-208ENST00000448872 SRGNP10124 158 aa14.86□□□□□ -0.03
RCL1-208ENST00000448872 KCNA3P22001 575 aa14.86□□□□□ -0.03
RCL1-208ENST00000448872 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
RCL1-208ENST00000448872 CHMP3Q9Y3E7 222 aa14.86□□□□□ -0.03
RCL1-208ENST00000448872 RIC1Q4ADV7 1423 aa14.86□□□□□ -0.03
RCL1-208ENST00000448872 TNRC6CQ9HCJ0 1690 aaKnown RBP14.86□□□□□ -0.03
RCL1-208ENST00000448872 H0YIN7 160 aa14.84□□□□□ -0.03
RCL1-208ENST00000448872 HSP90B1P14625 803 aaKnown RBP14.84□□□□□ -0.03
RCL1-208ENST00000448872 CCDC152Q4G0S7 254 aa14.84□□□□□ -0.03
RCL1-208ENST00000448872 RPGRQ92834 1020 aaKnown RBP14.84□□□□□ -0.03
RCL1-208ENST00000448872 ZNF622Q969S3 477 aaKnown RBP eCLIP14.84□□□□□ -0.032e-9■□□□□ 10
RCL1-208ENST00000448872 SYT17Q9BSW7 474 aa14.84□□□□□ -0.03
RCL1-208ENST00000448872 GOLGB1Q14789 3259 aaKnown RBP14.84□□□□□ -0.03
RCL1-208ENST00000448872 PNMA6EA0A0J9YXQ4 647 aa14.83□□□□□ -0.03
RCL1-208ENST00000448872 NPR1P16066 1061 aa14.83□□□□□ -0.03
RCL1-208ENST00000448872 ITGA6P23229 1130 aa14.83□□□□□ -0.03
RCL1-208ENST00000448872 TGFB2P61812 414 aa14.83□□□□□ -0.03
RCL1-208ENST00000448872 CEP85Q6P2H3 762 aa14.83□□□□□ -0.03
RCL1-208ENST00000448872 KLHDC4Q8TBB5 520 aa14.83□□□□□ -0.03
RCL1-208ENST00000448872 CELF1Q92879 486 aaKnown RBP14.83□□□□□ -0.03
RCL1-208ENST00000448872 PCDHB15Q9Y5E8 787 aa14.83□□□□□ -0.03
RCL1-208ENST00000448872 AFDNP55196 1824 aaKnown RBP14.83□□□□□ -0.04
RCL1-208ENST00000448872 SIRT2Q8IXJ6 389 aa14.82□□□□□ -0.04
RCL1-208ENST00000448872 MASTLQ96GX5 879 aa14.82□□□□□ -0.04
RCL1-208ENST00000448872 RBM17Q96I25 401 aaKnown RBP14.82□□□□□ -0.04
RCL1-208ENST00000448872 ZNF594Q96JF6 807 aaPredicted RBP14.82□□□□□ -0.04
RCL1-208ENST00000448872 N4BP2Q86UW6 1770 aaPredicted RBP14.82□□□□□ -0.04
RCL1-208ENST00000448872 COL4A1P02462 1669 aa14.82□□□□□ -0.04
RCL1-208ENST00000448872 SRGAP3O43295 1099 aa14.82□□□□□ -0.04
RCL1-208ENST00000448872 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
RCL1-208ENST00000448872 HOXA10P31260 410 aaPredicted RBP14.82□□□□□ -0.04
RCL1-208ENST00000448872 RFX5P48382 616 aaPredicted RBP14.82□□□□□ -0.04
RCL1-208ENST00000448872 DDX46Q7L014 1031 aaKnown RBP14.82□□□□□ -0.04
RCL1-208ENST00000448872 CHMP4BQ9H444 224 aaKnown RBP14.82□□□□□ -0.04
RCL1-208ENST00000448872 HDAC5Q9UQL6 1122 aa14.82□□□□□ -0.04
RCL1-208ENST00000448872 ATP8B2P98198 1209 aa14.81□□□□□ -0.04
RCL1-208ENST00000448872 IFIT5Q13325 482 aaKnown RBP14.81□□□□□ -0.04
RCL1-208ENST00000448872 MTX1Q13505 466 aa14.81□□□□□ -0.04
RCL1-208ENST00000448872 CCDC57Q2TAC2 916 aa14.81□□□□□ -0.04
RCL1-208ENST00000448872 STYK1Q6J9G0 422 aa14.81□□□□□ -0.04
RCL1-208ENST00000448872 PA2G4Q9UQ80 394 aaKnown RBP14.81□□□□□ -0.04
RCL1-208ENST00000448872 DDX60Q8IY21 1712 aaKnown RBP14.8□□□□□ -0.04
RCL1-208ENST00000448872 ANKRD18BA2A2Z9 1011 aa14.8□□□□□ -0.04
RCL1-208ENST00000448872 GRAPQ13588 217 aa14.8□□□□□ -0.04
RCL1-208ENST00000448872 PRPF40BQ6NWY9 871 aaKnown RBP14.8□□□□□ -0.04
RCL1-208ENST00000448872 OLFM4Q6UX06 510 aa14.8□□□□□ -0.04
RCL1-208ENST00000448872 GRAPLQ8TC17 118 aaPredicted RBP14.8□□□□□ -0.04
RCL1-208ENST00000448872 CRAMP1Q96RY5 1269 aa14.8□□□□□ -0.04
RCL1-208ENST00000448872 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
RCL1-208ENST00000448872 RTL9Q8NET4 1388 aa14.8□□□□□ -0.04
RCL1-208ENST00000448872 NEFLP07196 543 aa14.79□□□□□ -0.04
RCL1-208ENST00000448872 PTPN12Q05209 780 aaKnown RBP14.79□□□□□ -0.04
RCL1-208ENST00000448872 POLA2Q14181 598 aa14.79□□□□□ -0.04
RCL1-208ENST00000448872 PUS3Q9BZE2 481 aaKnown RBP14.79□□□□□ -0.04
RCL1-208ENST00000448872 PDZRN3Q9UPQ7 1066 aa14.79□□□□□ -0.04
RCL1-208ENST00000448872 ANKRD31Q8N7Z5 1873 aa14.79□□□□□ -0.04
RCL1-208ENST00000448872 RPS8P62241 208 aaKnown RBP14.78□□□□□ -0.04
RCL1-208ENST00000448872 ANKRD18AQ8IVF6 992 aa14.78□□□□□ -0.04
RCL1-208ENST00000448872 TTLL6Q8N841 843 aa14.78□□□□□ -0.04
RCL1-208ENST00000448872 SSH3Q8TE77 659 aa14.78□□□□□ -0.04
RCL1-208ENST00000448872 SIL1Q9H173 461 aa14.78□□□□□ -0.04
RCL1-208ENST00000448872 PIM2Q9P1W9 311 aa14.78□□□□□ -0.04
RCL1-208ENST00000448872 LRP5O75197 1615 aa14.78□□□□□ -0.04
RCL1-208ENST00000448872 PPEF1O14829 653 aaPredicted RBP14.77□□□□□ -0.04
RCL1-208ENST00000448872 ALDH1B1P30837 517 aa14.77□□□□□ -0.04
RCL1-208ENST00000448872 LRRC24Q50LG9 513 aa14.77□□□□□ -0.04
RCL1-208ENST00000448872 TAF7LQ5H9L4 462 aa14.77□□□□□ -0.04
RCL1-208ENST00000448872 RPAP2Q8IXW5 612 aaPredicted RBP14.77□□□□□ -0.04
RCL1-208ENST00000448872 CNKSR1Q969H4 720 aa14.77□□□□□ -0.04
RCL1-208ENST00000448872 CDC5LQ99459 802 aaKnown RBP14.77□□□□□ -0.04
RCL1-208ENST00000448872 COL11A2P13942 1736 aaPredicted RBP14.77□□□□□ -0.04
RCL1-208ENST00000448872 DALRD3Q5D0E6 543 aaKnown RBP14.76□□□□□ -0.05
RCL1-208ENST00000448872 BCS1LQ9Y276 419 aa14.76□□□□□ -0.05
RCL1-208ENST00000448872 C21orf2O43822 256 aa14.76□□□□□ -0.05
RCL1-208ENST00000448872 BBOX1O75936 387 aa14.76□□□□□ -0.05
RCL1-208ENST00000448872 IGHMBP2P38935 993 aaKnown RBP14.76□□□□□ -0.05
RCL1-208ENST00000448872 LDHAL6AQ6ZMR3 332 aa14.76□□□□□ -0.05
RCL1-208ENST00000448872 C7orf43Q8WVR3 580 aa14.76□□□□□ -0.05
RCL1-208ENST00000448872 LAMB2P55268 1798 aa14.75□□□□□ -0.05
RCL1-208ENST00000448872 KIAA1551Q9HCM1 1747 aa14.75□□□□□ -0.05
RCL1-208ENST00000448872 ATG9AQ7Z3C6 839 aa14.75□□□□□ -0.05
RCL1-208ENST00000448872 MPHOSPH8Q99549 860 aa14.75□□□□□ -0.05
RCL1-208ENST00000448872 COPRSQ9NQ92 184 aa14.75□□□□□ -0.05
RCL1-208ENST00000448872 BSDC1Q9NW68 430 aaPredicted RBP14.75□□□□□ -0.05
RCL1-208ENST00000448872 WTIPA6NIX2 430 aaPredicted RBP14.74□□□□□ -0.05
RCL1-208ENST00000448872 SURF6O75683 361 aaKnown RBP14.74□□□□□ -0.05
RCL1-208ENST00000448872 IGHDP01880 384 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms