RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 JARID2Q92833 1246 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-209ENST00000447986 CRAMP1Q96RY5 1269 aa16.51■□□□□ 0.23
ERGIC3-209ENST00000447986 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
ERGIC3-209ENST00000447986 TRIM27P14373 513 aa16.5■□□□□ 0.23
ERGIC3-209ENST00000447986 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
ERGIC3-209ENST00000447986 SOGA3Q5TF21 947 aa16.5■□□□□ 0.23
ERGIC3-209ENST00000447986 PRPF40BQ6NWY9 871 aaKnown RBP16.5■□□□□ 0.23
ERGIC3-209ENST00000447986 C3orf67Q6ZVT6 689 aa16.5■□□□□ 0.23
ERGIC3-209ENST00000447986 TMX4Q9H1E5 349 aaPredicted RBP16.5■□□□□ 0.23
ERGIC3-209ENST00000447986 FTSJ3Q8IY81 847 aaKnown RBP16.49■□□□□ 0.23
ERGIC3-209ENST00000447986 BRCA1P38398 1863 aaKnown RBP16.49■□□□□ 0.23
ERGIC3-209ENST00000447986 MS4A1P11836 297 aa16.48■□□□□ 0.23
ERGIC3-209ENST00000447986 CTSWP56202 376 aa16.48■□□□□ 0.23
ERGIC3-209ENST00000447986 POLA2Q14181 598 aa16.48■□□□□ 0.23
ERGIC3-209ENST00000447986 PLA2G12BQ9BX93 195 aa16.48■□□□□ 0.23
ERGIC3-209ENST00000447986 ABCC4O15439 1325 aa16.48■□□□□ 0.23
ERGIC3-209ENST00000447986 DDX60Q8IY21 1712 aaKnown RBP16.48■□□□□ 0.23
ERGIC3-209ENST00000447986 LAMB2P55268 1798 aa16.48■□□□□ 0.23
ERGIC3-209ENST00000447986 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
ERGIC3-209ENST00000447986 CLUAP1Q96AJ1 413 aa16.48■□□□□ 0.23
ERGIC3-209ENST00000447986 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
ERGIC3-209ENST00000447986 C21orf2O43822 256 aa16.47■□□□□ 0.23
ERGIC3-209ENST00000447986 BBOX1O75936 387 aa16.47■□□□□ 0.23
ERGIC3-209ENST00000447986 CASP7P55210 303 aa16.47■□□□□ 0.23
ERGIC3-209ENST00000447986 GRAPQ13588 217 aa16.47■□□□□ 0.23
ERGIC3-209ENST00000447986 INTS3Q68E01 1043 aaKnown RBP16.47■□□□□ 0.23
ERGIC3-209ENST00000447986 ARHGAP27Q6ZUM4 889 aa16.47■□□□□ 0.23
ERGIC3-209ENST00000447986 GRAPLQ8TC17 118 aaPredicted RBP16.47■□□□□ 0.23
ERGIC3-209ENST00000447986 UTYO14607 1347 aa16.47■□□□□ 0.23
ERGIC3-209ENST00000447986 PPEF1O14829 653 aaPredicted RBP16.46■□□□□ 0.23
ERGIC3-209ENST00000447986 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
ERGIC3-209ENST00000447986 TMC4Q7Z404 712 aa16.46■□□□□ 0.23
ERGIC3-209ENST00000447986 DZIP1LQ8IYY4 767 aaKnown RBP16.46■□□□□ 0.23
ERGIC3-209ENST00000447986 CAPN15O75808 1086 aa16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 NBPF7P0C2Y1 421 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 GRIPAP1Q4V328 841 aa16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 TTLL11Q8NHH1 800 aa16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 CCDC93Q567U6 631 aa16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 CCDC85AQ96PX6 553 aaPredicted RBP16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
ERGIC3-209ENST00000447986 CHMP3Q9Y3E7 222 aa16.44■□□□□ 0.22
ERGIC3-209ENST00000447986 CSF1RP07333 972 aa16.43■□□□□ 0.22
ERGIC3-209ENST00000447986 GNAI3P08754 354 aa16.43■□□□□ 0.22
ERGIC3-209ENST00000447986 RPS8P62241 208 aaKnown RBP16.43■□□□□ 0.22
ERGIC3-209ENST00000447986 ANKRD18AQ8IVF6 992 aa16.43■□□□□ 0.22
ERGIC3-209ENST00000447986 RTKN2Q8IZC4 609 aa16.43■□□□□ 0.22
ERGIC3-209ENST00000447986 C7orf43Q8WVR3 580 aa16.43■□□□□ 0.22
ERGIC3-209ENST00000447986 RTL9Q8NET4 1388 aa16.43■□□□□ 0.22
ERGIC3-209ENST00000447986 FOXO4P98177 505 aa16.42■□□□□ 0.22
ERGIC3-209ENST00000447986 TMEM57Q8N5G2 664 aa16.42■□□□□ 0.22
ERGIC3-209ENST00000447986 CELF1Q92879 486 aaKnown RBP16.42■□□□□ 0.22
ERGIC3-209ENST00000447986 SUCLG2Q96I99 432 aa16.42■□□□□ 0.22
ERGIC3-209ENST00000447986 GREM2Q9H772 168 aa16.42■□□□□ 0.22
ERGIC3-209ENST00000447986 SEC31BQ9NQW1 1179 aa16.42■□□□□ 0.22
ERGIC3-209ENST00000447986 ATP6V0A2Q9Y487 856 aa16.42■□□□□ 0.22
ERGIC3-209ENST00000447986 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
ERGIC3-209ENST00000447986 ANKRD18BA2A2Z9 1011 aa16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 ITGA6P23229 1130 aa16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 IFIT5Q13325 482 aaKnown RBP16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 CCDC57Q2TAC2 916 aa16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 LMBR1LQ6UX01 489 aa16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 SP8Q8IXZ3 490 aa16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 TNNQ9UQP3 1299 aa16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 CACNA1SQ13698 1873 aa16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 IGHMBP2P38935 993 aaKnown RBP16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 FAM161AQ3B820 660 aa16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 TAOK3Q9H2K8 898 aa16.41■□□□□ 0.22
ERGIC3-209ENST00000447986 MYH3P11055 1940 aa16.4■□□□□ 0.22
ERGIC3-209ENST00000447986 BICC1Q9H694 974 aaKnown RBP16.4■□□□□ 0.22
ERGIC3-209ENST00000447986 LTBP3Q9NS15 1303 aa16.39■□□□□ 0.21
ERGIC3-209ENST00000447986 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
ERGIC3-209ENST00000447986 EPHA10Q5JZY3 1008 aa16.39■□□□□ 0.21
ERGIC3-209ENST00000447986 MPHOSPH8Q99549 860 aa16.39■□□□□ 0.21
ERGIC3-209ENST00000447986 MEIS3Q99687 375 aa16.39■□□□□ 0.21
ERGIC3-209ENST00000447986 PLIN1O60240 522 aa16.38■□□□□ 0.21
ERGIC3-209ENST00000447986 VASPP50552 380 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-209ENST00000447986 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
ERGIC3-209ENST00000447986 RABL6Q3YEC7 729 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-209ENST00000447986 KAZALD1Q96I82 304 aa16.38■□□□□ 0.21
ERGIC3-209ENST00000447986 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
ERGIC3-209ENST00000447986 NFKBIEO00221 500 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 RLBP1P12271 317 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 LMNB1P20700 586 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 RASSF7Q02833 373 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 PDE3AQ14432 1141 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 DPP8Q6V1X1 898 aaPredicted RBP16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 MPNDQ8N594 471 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 SUPT20HQ8NEM7 779 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 PSMD1Q99460 953 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 BSDC1Q9NW68 430 aaPredicted RBP16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 GNAI2P04899 355 aa16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 NSFL1CQ9UNZ2 370 aaKnown RBP16.37■□□□□ 0.21
ERGIC3-209ENST00000447986 LRRFIP2Q9Y608 721 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms