RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CSF1RP07333 972 aa22.5■■□□□ 1.19
TRAPPC4-203ENST00000447216 FAM161AQ3B820 660 aa22.5■■□□□ 1.19
TRAPPC4-203ENST00000447216 RABL6Q3YEC7 729 aaPredicted RBP22.5■■□□□ 1.19
TRAPPC4-203ENST00000447216 CEP85Q6P2H3 762 aa22.5■■□□□ 1.19
TRAPPC4-203ENST00000447216 PCDHB15Q9Y5E8 787 aa22.5■■□□□ 1.19
TRAPPC4-203ENST00000447216 COL4A1P02462 1669 aa22.49■■□□□ 1.19
TRAPPC4-203ENST00000447216 DLEC1Q9Y238 1755 aa22.49■■□□□ 1.19
TRAPPC4-203ENST00000447216 SF3B3Q15393 1217 aaKnown RBP22.49■■□□□ 1.19
TRAPPC4-203ENST00000447216 GREM2Q9H772 168 aa22.49■■□□□ 1.19
TRAPPC4-203ENST00000447216 PPP1R1BQ9UD71 204 aaPredicted RBP22.49■■□□□ 1.19
TRAPPC4-203ENST00000447216 PNMA6EA0A0J9YXQ4 647 aa22.48■■□□□ 1.19
TRAPPC4-203ENST00000447216 PDE6BP35913 854 aa22.48■■□□□ 1.19
TRAPPC4-203ENST00000447216 CCDC152Q4G0S7 254 aa22.48■■□□□ 1.19
TRAPPC4-203ENST00000447216 KLRG2A4D1S0 409 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC4-203ENST00000447216 CHRNA5P30532 468 aa22.47■■□□□ 1.19
TRAPPC4-203ENST00000447216 ATP8B2P98198 1209 aa22.47■■□□□ 1.19
TRAPPC4-203ENST00000447216 C2CD5Q86YS7 1000 aa22.47■■□□□ 1.19
TRAPPC4-203ENST00000447216 SIRT2Q8IXJ6 389 aa22.47■■□□□ 1.19
TRAPPC4-203ENST00000447216 SEC31BQ9NQW1 1179 aa22.47■■□□□ 1.19
TRAPPC4-203ENST00000447216 SRGAP3O43295 1099 aa22.46■■□□□ 1.19
TRAPPC4-203ENST00000447216 CRY2Q49AN0 593 aa22.46■■□□□ 1.19
TRAPPC4-203ENST00000447216 RPGRQ92834 1020 aaKnown RBP22.46■■□□□ 1.19
TRAPPC4-203ENST00000447216 MTX1Q13505 466 aa22.45■■□□□ 1.18
TRAPPC4-203ENST00000447216 AAMPQ13685 434 aa22.45■■□□□ 1.18
TRAPPC4-203ENST00000447216 LRP5O75197 1615 aa22.44■■□□□ 1.18
TRAPPC4-203ENST00000447216 SRGNP10124 158 aa22.44■■□□□ 1.18
TRAPPC4-203ENST00000447216 ITGA6P23229 1130 aa22.44■■□□□ 1.18
TRAPPC4-203ENST00000447216 RPAP2Q8IXW5 612 aaPredicted RBP22.44■■□□□ 1.18
TRAPPC4-203ENST00000447216 ZNF594Q96JF6 807 aaPredicted RBP22.44■■□□□ 1.18
TRAPPC4-203ENST00000447216 BRCA1P38398 1863 aaKnown RBP22.43■■□□□ 1.18
TRAPPC4-203ENST00000447216 RTL9Q8NET4 1388 aa22.43■■□□□ 1.18
TRAPPC4-203ENST00000447216 A0A0G2JLW4 131 aa22.43■■□□□ 1.18
TRAPPC4-203ENST00000447216 H0YIN7 160 aa22.43■■□□□ 1.18
TRAPPC4-203ENST00000447216 DPEP1P16444 411 aa22.43■■□□□ 1.18
TRAPPC4-203ENST00000447216 RFX5P48382 616 aaPredicted RBP22.43■■□□□ 1.18
TRAPPC4-203ENST00000447216 IFIT5Q13325 482 aaKnown RBP22.43■■□□□ 1.18
TRAPPC4-203ENST00000447216 DDX46Q7L014 1031 aaKnown RBP22.43■■□□□ 1.18
TRAPPC4-203ENST00000447216 KLHDC4Q8TBB5 520 aa22.43■■□□□ 1.18
TRAPPC4-203ENST00000447216 SLX4Q8IY92 1834 aa22.43■■□□□ 1.18
TRAPPC4-203ENST00000447216 ANKRD18BA2A2Z9 1011 aa22.42■■□□□ 1.18
TRAPPC4-203ENST00000447216 NPR1P16066 1061 aa22.42■■□□□ 1.18
TRAPPC4-203ENST00000447216 POLA2Q14181 598 aa22.42■■□□□ 1.18
TRAPPC4-203ENST00000447216 CCDC57Q2TAC2 916 aa22.42■■□□□ 1.18
TRAPPC4-203ENST00000447216 SSH3Q8TE77 659 aa22.42■■□□□ 1.18
TRAPPC4-203ENST00000447216 ZNF622Q969S3 477 aaKnown RBP eCLIP22.42■■□□□ 1.18
TRAPPC4-203ENST00000447216 RBM17Q96I25 401 aaKnown RBP22.42■■□□□ 1.18
TRAPPC4-203ENST00000447216 PA2G4Q9UQ80 394 aaKnown RBP22.42■■□□□ 1.18
TRAPPC4-203ENST00000447216 CD2APQ9Y5K6 639 aa22.42■■□□□ 1.18
TRAPPC4-203ENST00000447216 CELF1Q92879 486 aaKnown RBP22.41■■□□□ 1.18
TRAPPC4-203ENST00000447216 MASTLQ96GX5 879 aa22.41■■□□□ 1.18
TRAPPC4-203ENST00000447216 FHDC1Q9C0D6 1143 aaPredicted RBP22.41■■□□□ 1.18
TRAPPC4-203ENST00000447216 HOXA10P31260 410 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC4-203ENST00000447216 TAF7LQ5H9L4 462 aa22.4■■□□□ 1.18
TRAPPC4-203ENST00000447216 NLGN2Q8NFZ4 835 aa22.4■■□□□ 1.18
TRAPPC4-203ENST00000447216 TGFB2P61812 414 aa22.39■■□□□ 1.17
TRAPPC4-203ENST00000447216 PTPN12Q05209 780 aaKnown RBP22.39■■□□□ 1.17
TRAPPC4-203ENST00000447216 STYK1Q6J9G0 422 aa22.39■■□□□ 1.17
TRAPPC4-203ENST00000447216 PDZRN3Q9UPQ7 1066 aa22.39■■□□□ 1.17
TRAPPC4-203ENST00000447216 A0A1B0GUL6 1792 aa22.38■■□□□ 1.17
TRAPPC4-203ENST00000447216 HMMRO75330 724 aa22.38■■□□□ 1.17
TRAPPC4-203ENST00000447216 KCNA3P22001 575 aa22.38■■□□□ 1.17
TRAPPC4-203ENST00000447216 GRAPQ13588 217 aa22.38■■□□□ 1.17
TRAPPC4-203ENST00000447216 SLC51AQ86UW1 340 aa22.38■■□□□ 1.17
TRAPPC4-203ENST00000447216 GRAPLQ8TC17 118 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC4-203ENST00000447216 CRAMP1Q96RY5 1269 aa22.38■■□□□ 1.17
TRAPPC4-203ENST00000447216 CDC5LQ99459 802 aaKnown RBP22.38■■□□□ 1.17
TRAPPC4-203ENST00000447216 SIL1Q9H173 461 aa22.38■■□□□ 1.17
TRAPPC4-203ENST00000447216 WWC3Q9ULE0 1092 aa22.38■■□□□ 1.17
TRAPPC4-203ENST00000447216 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
TRAPPC4-203ENST00000447216 ANKRD18AQ8IVF6 992 aa22.37■■□□□ 1.17
TRAPPC4-203ENST00000447216 PUS3Q9BZE2 481 aaKnown RBP22.37■■□□□ 1.17
TRAPPC4-203ENST00000447216 IGHDP01880 384 aa22.36■■□□□ 1.17
TRAPPC4-203ENST00000447216 RPS8P62241 208 aaKnown RBP22.36■■□□□ 1.17
TRAPPC4-203ENST00000447216 SURF6O75683 361 aaKnown RBP22.35■■□□□ 1.17
TRAPPC4-203ENST00000447216 IGHMBP2P38935 993 aaKnown RBP22.35■■□□□ 1.17
TRAPPC4-203ENST00000447216 LRRC24Q50LG9 513 aa22.35■■□□□ 1.17
TRAPPC4-203ENST00000447216 COPRSQ9NQ92 184 aa22.35■■□□□ 1.17
TRAPPC4-203ENST00000447216 EXOC6BQ9Y2D4 811 aa22.35■■□□□ 1.17
TRAPPC4-203ENST00000447216 ALDH1B1P30837 517 aa22.34■■□□□ 1.17
TRAPPC4-203ENST00000447216 HDAC1Q13547 482 aaPredicted RBP22.34■■□□□ 1.17
TRAPPC4-203ENST00000447216 CNKSR1Q969H4 720 aa22.34■■□□□ 1.17
TRAPPC4-203ENST00000447216 MPHOSPH8Q99549 860 aa22.34■■□□□ 1.17
TRAPPC4-203ENST00000447216 LRRC37AA6NMS7 1700 aa22.34■■□□□ 1.17
TRAPPC4-203ENST00000447216 PPEF1O14829 653 aaPredicted RBP22.33■■□□□ 1.17
TRAPPC4-203ENST00000447216 PRPF40BQ6NWY9 871 aaKnown RBP22.33■■□□□ 1.17
TRAPPC4-203ENST00000447216 LDHAL6AQ6ZMR3 332 aa22.33■■□□□ 1.17
TRAPPC4-203ENST00000447216 SYT17Q9BSW7 474 aa22.33■■□□□ 1.17
TRAPPC4-203ENST00000447216 RWDD1Q9H446 243 aaPredicted RBP22.33■■□□□ 1.17
TRAPPC4-203ENST00000447216 CNNM1Q9NRU3 951 aa22.33■■□□□ 1.17
TRAPPC4-203ENST00000447216 PPP4R2Q9NY27 417 aa22.33■■□□□ 1.17
TRAPPC4-203ENST00000447216 ZNF219Q9P2Y4 722 aaPredicted RBP22.33■■□□□ 1.17
TRAPPC4-203ENST00000447216 GTF3C3Q9Y5Q9 886 aa22.33■■□□□ 1.17
TRAPPC4-203ENST00000447216 EYA2O00167 538 aa22.32■■□□□ 1.16
TRAPPC4-203ENST00000447216 B4GALNT3Q6L9W6 998 aa22.32■■□□□ 1.16
TRAPPC4-203ENST00000447216 TTLL6Q8N841 843 aa22.32■■□□□ 1.16
TRAPPC4-203ENST00000447216 PIM2Q9P1W9 311 aa22.32■■□□□ 1.16
TRAPPC4-203ENST00000447216 APBB1O00213 710 aa22.31■■□□□ 1.16
TRAPPC4-203ENST00000447216 BBOX1O75936 387 aa22.31■■□□□ 1.16
TRAPPC4-203ENST00000447216 G3BP1Q13283 466 aaKnown RBP eCLIP22.31■■□□□ 1.16
TRAPPC4-203ENST00000447216 OS9Q13438 667 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms