RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 CELF1Q92879 486 aaKnown RBP12.77□□□□□ -0.37
LIN54-203ENST00000446851 CNKSR1Q969H4 720 aa12.77□□□□□ -0.37
LIN54-203ENST00000446851 ALDH1B1P30837 517 aa12.76□□□□□ -0.37
LIN54-203ENST00000446851 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
LIN54-203ENST00000446851 TOGARAM1Q9Y4F4 1720 aa12.76□□□□□ -0.37
LIN54-203ENST00000446851 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
LIN54-203ENST00000446851 DPP8Q6V1X1 898 aaPredicted RBP12.76□□□□□ -0.37
LIN54-203ENST00000446851 MASTLQ96GX5 879 aa12.76□□□□□ -0.37
LIN54-203ENST00000446851 CHAF1AQ13111 956 aaPredicted RBP12.75□□□□□ -0.37
LIN54-203ENST00000446851 SCN11AQ9UI33 1791 aa12.75□□□□□ -0.37
LIN54-203ENST00000446851 CEP126Q9P2H0 1117 aa12.75□□□□□ -0.37
LIN54-203ENST00000446851 GJA3Q9Y6H8 435 aa12.75□□□□□ -0.37
LIN54-203ENST00000446851 UFL1O94874 794 aa12.75□□□□□ -0.37
LIN54-203ENST00000446851 ARHGAP45Q92619 1136 aa12.75□□□□□ -0.37
LIN54-203ENST00000446851 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
LIN54-203ENST00000446851 RGS3P49796 1198 aa12.74□□□□□ -0.37
LIN54-203ENST00000446851 LARGE2Q8N3Y3 721 aa12.74□□□□□ -0.37
LIN54-203ENST00000446851 NPR1P16066 1061 aa12.74□□□□□ -0.37
LIN54-203ENST00000446851 PTGER2P43116 358 aa12.74□□□□□ -0.37
LIN54-203ENST00000446851 PDE3AQ14432 1141 aa12.74□□□□□ -0.37
LIN54-203ENST00000446851 ANKRD45Q5TZF3 282 aa12.74□□□□□ -0.37
LIN54-203ENST00000446851 LRP10Q7Z4F1 713 aa12.74□□□□□ -0.37
LIN54-203ENST00000446851 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
LIN54-203ENST00000446851 ZC3H12CQ9C0D7 883 aaKnown RBP12.74□□□□□ -0.37
LIN54-203ENST00000446851 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
LIN54-203ENST00000446851 PPEF1O14829 653 aaPredicted RBP12.73□□□□□ -0.37
LIN54-203ENST00000446851 PUS3Q9BZE2 481 aaKnown RBP12.73□□□□□ -0.37
LIN54-203ENST00000446851 ZNF277Q9NRM2 450 aaPredicted RBP12.73□□□□□ -0.37
LIN54-203ENST00000446851 DOK7Q18PE1 504 aa12.73□□□□□ -0.37
LIN54-203ENST00000446851 SLC51AQ86UW1 340 aa12.73□□□□□ -0.37
LIN54-203ENST00000446851 MPNDQ8N594 471 aa12.73□□□□□ -0.37
LIN54-203ENST00000446851 TTLL11Q8NHH1 800 aa12.73□□□□□ -0.37
LIN54-203ENST00000446851 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
LIN54-203ENST00000446851 PPIP5K2O43314 1243 aa12.73□□□□□ -0.37
LIN54-203ENST00000446851 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
LIN54-203ENST00000446851 RBM26Q5T8P6 1007 aaKnown RBP12.72□□□□□ -0.37
LIN54-203ENST00000446851 PNMA6EA0A0J9YXQ4 647 aa12.72□□□□□ -0.37
LIN54-203ENST00000446851 SRGNP10124 158 aa12.72□□□□□ -0.37
LIN54-203ENST00000446851 H7C1W4 665 aa12.71□□□□□ -0.37
LIN54-203ENST00000446851 LRRC24Q50LG9 513 aa12.71□□□□□ -0.37
LIN54-203ENST00000446851 INTS3Q68E01 1043 aaKnown RBP12.71□□□□□ -0.37
LIN54-203ENST00000446851 RNF181Q9P0P0 153 aa12.71□□□□□ -0.37
LIN54-203ENST00000446851 CD2APQ9Y5K6 639 aa12.71□□□□□ -0.37
LIN54-203ENST00000446851 MYH14Q7Z406 1995 aaKnown RBP12.71□□□□□ -0.37
LIN54-203ENST00000446851 SMARCA5O60264 1052 aaPredicted RBP12.71□□□□□ -0.37
LIN54-203ENST00000446851 CCDC8Q9H0W5 538 aaPredicted RBP12.71□□□□□ -0.37
LIN54-203ENST00000446851 C4BP0C0L5 1744 aa12.71□□□□□ -0.38
LIN54-203ENST00000446851 IFIT2P09913 472 aaKnown RBP12.7□□□□□ -0.38
LIN54-203ENST00000446851 RASSF7Q02833 373 aa12.7□□□□□ -0.38
LIN54-203ENST00000446851 DBNDD1Q9H9R9 158 aa12.7□□□□□ -0.38
LIN54-203ENST00000446851 SHANK3Q9BYB0 1731 aa12.7□□□□□ -0.38
LIN54-203ENST00000446851 RBM5P52756 815 aaKnown RBP eCLIP12.7□□□□□ -0.38
LIN54-203ENST00000446851 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
LIN54-203ENST00000446851 TRIM28Q13263 835 aaKnown RBP12.7□□□□□ -0.38
LIN54-203ENST00000446851 LNPKQ9C0E8 428 aa12.7□□□□□ -0.38
LIN54-203ENST00000446851 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
LIN54-203ENST00000446851 TIMM10P62072 90 aa12.69□□□□□ -0.38
LIN54-203ENST00000446851 ABCF2Q9UG63 623 aa12.69□□□□□ -0.38
LIN54-203ENST00000446851 ABCC4O15439 1325 aa12.69□□□□□ -0.38
LIN54-203ENST00000446851 TGFB2P61812 414 aa12.69□□□□□ -0.38
LIN54-203ENST00000446851 GRAPQ13588 217 aa12.69□□□□□ -0.38
LIN54-203ENST00000446851 GRAPLQ8TC17 118 aaPredicted RBP12.69□□□□□ -0.38
LIN54-203ENST00000446851 TAOK3Q9H2K8 898 aa12.69□□□□□ -0.38
LIN54-203ENST00000446851 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
LIN54-203ENST00000446851 GGA1Q9UJY5 639 aa12.69□□□□□ -0.38
LIN54-203ENST00000446851 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
LIN54-203ENST00000446851 CCDC93Q567U6 631 aa12.68□□□□□ -0.38
LIN54-203ENST00000446851 RAD17O75943 681 aa12.68□□□□□ -0.38
LIN54-203ENST00000446851 AACSQ86V21 672 aa12.68□□□□□ -0.38
LIN54-203ENST00000446851 SBF2Q86WG5 1849 aa12.68□□□□□ -0.38
LIN54-203ENST00000446851 BBOX1O75936 387 aa12.67□□□□□ -0.38
LIN54-203ENST00000446851 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
LIN54-203ENST00000446851 CHRNDQ07001 517 aa12.67□□□□□ -0.38
LIN54-203ENST00000446851 CLASRPQ8N2M8 674 aaKnown RBP12.67□□□□□ -0.38
LIN54-203ENST00000446851 WTIPA6NIX2 430 aaPredicted RBP12.67□□□□□ -0.38
LIN54-203ENST00000446851 IFIT1P09914 478 aaKnown RBP12.67□□□□□ -0.38
LIN54-203ENST00000446851 AOC3Q16853 763 aa12.67□□□□□ -0.38
LIN54-203ENST00000446851 CAVIN4Q5BKX8 364 aa12.67□□□□□ -0.38
LIN54-203ENST00000446851 TSHZ3Q63HK5 1081 aa12.67□□□□□ -0.38
LIN54-203ENST00000446851 DNAJC2Q99543 621 aaKnown RBP12.67□□□□□ -0.38
LIN54-203ENST00000446851 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
LIN54-203ENST00000446851 WNK3Q9BYP7 1800 aa12.67□□□□□ -0.38
LIN54-203ENST00000446851 TFCP2Q12800 502 aa12.67□□□□□ -0.38
LIN54-203ENST00000446851 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
LIN54-203ENST00000446851 GYG1P46976 350 aa12.66□□□□□ -0.38
LIN54-203ENST00000446851 MAP4K4O95819 1239 aaPredicted RBP12.66□□□□□ -0.38
LIN54-203ENST00000446851 NIM1KQ8IY84 436 aa12.66□□□□□ -0.38
LIN54-203ENST00000446851 TRIM6-TRIM34B2RNG4 842 aa12.65□□□□□ -0.38
LIN54-203ENST00000446851 ATP2B3Q16720 1220 aa12.65□□□□□ -0.38
LIN54-203ENST00000446851 CEP85Q6P2H3 762 aa12.65□□□□□ -0.38
LIN54-203ENST00000446851 GRIN3BO60391 1043 aa12.65□□□□□ -0.38
LIN54-203ENST00000446851 FOXO4P98177 505 aa12.65□□□□□ -0.38
LIN54-203ENST00000446851 EYA2O00167 538 aa12.65□□□□□ -0.38
LIN54-203ENST00000446851 SKAP1Q86WV1 359 aa12.65□□□□□ -0.38
LIN54-203ENST00000446851 RPAP2Q8IXW5 612 aaPredicted RBP12.65□□□□□ -0.38
LIN54-203ENST00000446851 GPSM2P81274 684 aa12.64□□□□□ -0.39
LIN54-203ENST00000446851 ATP8B2P98198 1209 aa12.64□□□□□ -0.39
LIN54-203ENST00000446851 EAPPQ56P03 285 aaPredicted RBP12.64□□□□□ -0.39
LIN54-203ENST00000446851 TTC39AQ5SRH9 613 aa12.64□□□□□ -0.39
LIN54-203ENST00000446851 ZBTB40Q9NUA8 1239 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms