RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 INTS5Q6P9B9 1019 aaKnown RBP11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 TMX3Q96JJ7 454 aa11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 CCDC87Q9NVE4 849 aa11.49□□□□□ -0.57
COL6A4P1-201ENST00000446690 IRS4O14654 1257 aaPredicted RBP11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 MCM2P49736 904 aa11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 ITPK1Q13572 414 aa11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 DDX46Q7L014 1031 aaKnown RBP11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 SLIT2O94813 1529 aa11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 A0A1B0GUL7 405 aa11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 ERVV-1B6SEH8 477 aa11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 SSFA2P28290 1259 aa11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 GORABQ5T7V8 394 aa11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
COL6A4P1-201ENST00000446690 CIAO1O76071 339 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 CHGBP05060 677 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 CSF1RP07333 972 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 KCNQ4P56696 695 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 HAUS7Q99871 368 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 GREM2Q9H772 168 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 PALLDQ8WX93 1383 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 LRP6O75581 1613 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 GOLIM4O00461 696 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 CPA1P15085 419 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 ITGA6P23229 1130 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 EIF5P55010 431 aaKnown RBP11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 VPS72Q15906 364 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 CCDC171Q6TFL3 1326 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 LDHAL6AQ6ZMR3 332 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 TTLL11Q8NHH1 800 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 GBP4Q96PP9 640 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 PLA2G12BQ9BX93 195 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 CWC22Q9HCG8 908 aaKnown RBP11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 USP21Q9UK80 565 aa11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 RBM8AQ9Y5S9 174 aaKnown RBP11.47□□□□□ -0.57
COL6A4P1-201ENST00000446690 NRAPQ86VF7 1730 aa11.46□□□□□ -0.57
COL6A4P1-201ENST00000446690 DOT1LQ8TEK3 1739 aa11.46□□□□□ -0.57
COL6A4P1-201ENST00000446690 JCADQ9P266 1359 aa11.46□□□□□ -0.57
COL6A4P1-201ENST00000446690 CASTP20810 708 aaKnown RBP11.46□□□□□ -0.57
COL6A4P1-201ENST00000446690 CTSWP56202 376 aa11.46□□□□□ -0.57
COL6A4P1-201ENST00000446690 JAKMIP1Q96N16 626 aaKnown RBP11.46□□□□□ -0.57
COL6A4P1-201ENST00000446690 GPR108Q9NPR9 543 aa11.46□□□□□ -0.57
COL6A4P1-201ENST00000446690 UBN2Q6ZU65 1347 aa11.46□□□□□ -0.58
COL6A4P1-201ENST00000446690 AK9Q5TCS8 1911 aa11.46□□□□□ -0.58
COL6A4P1-201ENST00000446690 ANKRD18BA2A2Z9 1011 aa11.46□□□□□ -0.58
COL6A4P1-201ENST00000446690 IFIT1P09914 478 aaKnown RBP11.46□□□□□ -0.58
COL6A4P1-201ENST00000446690 ZKSCAN1P17029 563 aaPredicted RBP11.46□□□□□ -0.58
COL6A4P1-201ENST00000446690 PKP1Q13835 747 aa11.46□□□□□ -0.58
COL6A4P1-201ENST00000446690 FAM182BQ5T319 152 aa11.46□□□□□ -0.58
COL6A4P1-201ENST00000446690 ZNF589Q86UQ0 364 aaPredicted RBP11.46□□□□□ -0.58
COL6A4P1-201ENST00000446690 SMARCC1Q92922 1105 aaPredicted RBP11.46□□□□□ -0.58
COL6A4P1-201ENST00000446690 CNNM1Q9NRU3 951 aa11.46□□□□□ -0.58
COL6A4P1-201ENST00000446690 TJP1Q07157 1748 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 CDHR2Q9BYE9 1310 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 PDE8AO60658 829 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 NUCB2P80303 420 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 FKBP4Q02790 459 aaKnown RBP eCLIP11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 NECTIN1Q15223 517 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 ADCK5Q3MIX3 580 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 METTL24Q5JXM2 366 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 MEX3CQ5U5Q3 659 aaKnown RBP11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 SUSD4Q5VX71 490 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 ZNF34Q8IZ26 560 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 MAP4K1Q92918 833 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 IL17RAQ96F46 866 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 SEC62Q99442 399 aaKnown RBP11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 GZF1Q9H116 711 aaPredicted RBP11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 PAG1Q9NWQ8 432 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 AKAP2Q9Y2D5 859 aa11.45□□□□□ -0.58
COL6A4P1-201ENST00000446690 DDX11L8A8MPP1 907 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 TRAK2O60296 914 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 HCLS1P14317 486 aaPredicted RBP11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 ADORA1P30542 326 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 SLFNL1Q499Z3 407 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 CCDC158Q5M9N0 1113 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 TTC39AQ5SRH9 613 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 FOXD4L5Q5VV16 416 aaPredicted RBP11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 CREB3L3Q68CJ9 461 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 CCDC129Q6ZRS4 1044 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 UBE2Q2Q8WVN8 375 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 FOXD4L4Q8WXT5 416 aaPredicted RBP11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 BCL9LQ86UU0 1499 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 AK2P54819 239 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 PTF1AQ7RTS3 328 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 XAGE2Q96GT9 111 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 SNRKQ9NRH2 765 aa11.44□□□□□ -0.58
COL6A4P1-201ENST00000446690 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 KBTBD3Q8NAB2 608 aa11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 UTP14AQ9BVJ6 771 aaKnown RBP11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 PDRG1Q9NUG6 133 aa11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 NIP7Q9Y221 180 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 WNK3Q9BYP7 1800 aa11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 SLC27A2O14975 620 aa11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 TAF5LO75529 589 aa11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 MCMDC2Q4G0Z9 681 aa11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 RNF20Q5VTR2 975 aa11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 RIPOR2Q9Y4F9 1068 aa11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 CYP46A1Q9Y6A2 500 aa11.43□□□□□ -0.58
COL6A4P1-201ENST00000446690 CAMTA2O94983 1202 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms