RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 ATG9AQ7Z3C6 839 aa20.2■□□□□ 0.82
LAPTM4B-201ENST00000445593 CCDC191Q8NCU4 936 aa20.2■□□□□ 0.82
LAPTM4B-201ENST00000445593 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
LAPTM4B-201ENST00000445593 CCDC57Q2TAC2 916 aa20.19■□□□□ 0.82
LAPTM4B-201ENST00000445593 GLI3P10071 1580 aa20.18■□□□□ 0.82
LAPTM4B-201ENST00000445593 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
LAPTM4B-201ENST00000445593 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.82
LAPTM4B-201ENST00000445593 STK3Q13188 491 aa20.18■□□□□ 0.82
LAPTM4B-201ENST00000445593 HSP90AB3PQ58FF7 597 aa20.18■□□□□ 0.82
LAPTM4B-201ENST00000445593 L1TD1Q5T7N2 865 aaKnown RBP20.18■□□□□ 0.82
LAPTM4B-201ENST00000445593 ERBB4Q15303 1308 aa20.18■□□□□ 0.82
LAPTM4B-201ENST00000445593 CUL4AQ13619 759 aa20.18■□□□□ 0.82
LAPTM4B-201ENST00000445593 GORABQ5T7V8 394 aa20.18■□□□□ 0.82
LAPTM4B-201ENST00000445593 CYP46A1Q9Y6A2 500 aa20.18■□□□□ 0.82
LAPTM4B-201ENST00000445593 ABCC6O95255 1503 aa20.17■□□□□ 0.82
LAPTM4B-201ENST00000445593 RBM10P98175 930 aaKnown RBP20.17■□□□□ 0.82
LAPTM4B-201ENST00000445593 SLC27A2O14975 620 aa20.17■□□□□ 0.82
LAPTM4B-201ENST00000445593 TTC14Q96N46 770 aa20.17■□□□□ 0.82
LAPTM4B-201ENST00000445593 LMBRD1Q9NUN5 540 aa20.17■□□□□ 0.82
LAPTM4B-201ENST00000445593 NSFL1CQ9UNZ2 370 aaKnown RBP20.17■□□□□ 0.82
LAPTM4B-201ENST00000445593 A0A1B0GUL7 405 aa20.16■□□□□ 0.82
LAPTM4B-201ENST00000445593 ATP5JP18859 108 aa20.16■□□□□ 0.82
LAPTM4B-201ENST00000445593 ADORA1P30542 326 aa20.16■□□□□ 0.82
LAPTM4B-201ENST00000445593 NECTIN1Q15223 517 aa20.16■□□□□ 0.82
LAPTM4B-201ENST00000445593 LRRC2Q9BYS8 371 aa20.16■□□□□ 0.82
LAPTM4B-201ENST00000445593 LIMCH1Q9UPQ0 1083 aa20.16■□□□□ 0.82
LAPTM4B-201ENST00000445593 EYA2O00167 538 aa20.16■□□□□ 0.82
LAPTM4B-201ENST00000445593 KCNQ4P56696 695 aa20.15■□□□□ 0.82
LAPTM4B-201ENST00000445593 PDE4CQ08493 712 aa20.15■□□□□ 0.82
LAPTM4B-201ENST00000445593 ABCA3Q99758 1704 aa20.15■□□□□ 0.82
LAPTM4B-201ENST00000445593 HIP1O00291 1037 aa20.15■□□□□ 0.82
LAPTM4B-201ENST00000445593 MAP4K1Q92918 833 aa20.15■□□□□ 0.82
LAPTM4B-201ENST00000445593 SKOR2Q2VWA4 1001 aaPredicted RBP20.14■□□□□ 0.82
LAPTM4B-201ENST00000445593 PI16Q6UXB8 463 aa20.14■□□□□ 0.82
LAPTM4B-201ENST00000445593 SMC3Q9UQE7 1217 aa20.14■□□□□ 0.82
LAPTM4B-201ENST00000445593 PPFIA3O75145 1194 aa20.14■□□□□ 0.81
LAPTM4B-201ENST00000445593 GRPEL1Q9HAV7 217 aa20.14■□□□□ 0.81
LAPTM4B-201ENST00000445593 CEP126Q9P2H0 1117 aa20.14■□□□□ 0.81
LAPTM4B-201ENST00000445593 ISCA1Q9BUE6 129 aa20.14■□□□□ 0.81
LAPTM4B-201ENST00000445593 TRMT112Q9UI30 125 aaKnown RBP20.14■□□□□ 0.81
LAPTM4B-201ENST00000445593 FSD2A1L4K1 749 aa20.13■□□□□ 0.81
LAPTM4B-201ENST00000445593 BRD1O95696 1058 aa20.13■□□□□ 0.81
LAPTM4B-201ENST00000445593 IFIT1P09914 478 aaKnown RBP20.13■□□□□ 0.81
LAPTM4B-201ENST00000445593 IL15P40933 162 aaPredicted RBP20.13■□□□□ 0.81
LAPTM4B-201ENST00000445593 VPS53Q5VIR6 699 aa20.13■□□□□ 0.81
LAPTM4B-201ENST00000445593 COL15A1P39059 1388 aa20.13■□□□□ 0.81
LAPTM4B-201ENST00000445593 GPT2Q8TD30 523 aa20.13■□□□□ 0.81
LAPTM4B-201ENST00000445593 TOGARAM1Q9Y4F4 1720 aa20.12■□□□□ 0.81
LAPTM4B-201ENST00000445593 DDB1Q16531 1140 aa20.12■□□□□ 0.81
LAPTM4B-201ENST00000445593 PAG1Q9NWQ8 432 aa20.12■□□□□ 0.81
LAPTM4B-201ENST00000445593 A0A0G2JLW4 131 aa20.12■□□□□ 0.81
LAPTM4B-201ENST00000445593 TAF5LO75529 589 aa20.12■□□□□ 0.81
LAPTM4B-201ENST00000445593 CYP19A1P11511 503 aaPredicted RBP20.12■□□□□ 0.81
LAPTM4B-201ENST00000445593 ME3Q16798 604 aa20.12■□□□□ 0.81
LAPTM4B-201ENST00000445593 GREM2Q9H772 168 aa20.12■□□□□ 0.81
LAPTM4B-201ENST00000445593 TNS2Q63HR2 1409 aa20.12■□□□□ 0.81
LAPTM4B-201ENST00000445593 VPS37CA5D8V6 355 aaPredicted RBP20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 IFIT5Q13325 482 aaKnown RBP20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 KLHL40Q2TBA0 621 aa20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 BLOC1S2Q6QNY1 142 aa20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 HELBQ8NG08 1087 aaPredicted RBP20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 HAUS7Q99871 368 aa20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 TPCN1Q9ULQ1 816 aa20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 SMIM5Q71RC9 77 aa20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 DZIP3Q86Y13 1208 aaKnown RBP20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 INTS4Q96HW7 963 aaKnown RBP20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 NAP1L2Q9ULW6 460 aaPredicted RBP20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 ZNF609O15014 1411 aa20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 MAP3K15Q6ZN16 1313 aa20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 GJB2P29033 226 aa20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 SHANK3Q9BYB0 1731 aa20.11■□□□□ 0.81
LAPTM4B-201ENST00000445593 ZSWIM6Q9HCJ5 1215 aa20.1■□□□□ 0.81
LAPTM4B-201ENST00000445593 GIGYF2Q6Y7W6 1299 aaKnown RBP20.1■□□□□ 0.81
LAPTM4B-201ENST00000445593 LAMB4A4D0S4 1761 aa20.1■□□□□ 0.81
LAPTM4B-201ENST00000445593 SNAP23O00161 211 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 RNF20Q5VTR2 975 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 TEX13AQ9BXU3 409 aaPredicted RBP20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 BCL11BQ9C0K0 894 aaPredicted RBP20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 HCLS1P14317 486 aaPredicted RBP20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 SYT1P21579 422 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 ITGA6P23229 1130 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 ATP6V1AP38606 617 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 FGD1P98174 961 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 SCARF1Q14162 830 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 METTL24Q5JXM2 366 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 TTC39AQ5SRH9 613 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 LDHAL6AQ6ZMR3 332 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 FERMT3Q86UX7 667 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 NLRP10Q86W26 655 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 CNNM1Q9NRU3 951 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 FOSBP53539 338 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 ROBO1Q9Y6N7 1651 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 MED23Q9ULK4 1368 aa20.09■□□□□ 0.81
LAPTM4B-201ENST00000445593 IRS4O14654 1257 aaPredicted RBP20.08■□□□□ 0.81
LAPTM4B-201ENST00000445593 KCNQ2O43526 872 aa20.08■□□□□ 0.81
LAPTM4B-201ENST00000445593 GADD45BO75293 160 aaPredicted RBP20.08■□□□□ 0.81
LAPTM4B-201ENST00000445593 WASHC4Q2M389 1173 aa20.08■□□□□ 0.81
LAPTM4B-201ENST00000445593 CLEC17AQ6ZS10 378 aa20.08■□□□□ 0.81
LAPTM4B-201ENST00000445593 KBTBD3Q8NAB2 608 aa20.08■□□□□ 0.81
LAPTM4B-201ENST00000445593 ZBTB38Q8NAP3 1195 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms