RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PCDHB13Q9Y5F0 798 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 C9IYK1 514 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MPHOSPH10O00566 681 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PRMT3O60678 531 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ALDH1L1O75891 902 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 KIF20AO95235 890 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 RAPGEF3O95398 923 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ABL1P00519 1130 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 P4HBP07237 508 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MSL3P1P0C860 447 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SLC5A1P13866 664 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 HCLS1P14317 486 aaPredicted RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 NAT1P18440 290 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 GJA5P36382 358 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 TNNI2P48788 182 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 EIF4G2P78344 907 aaKnown RBP eCLIP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PURAQ00577 322 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ATP2B2Q01814 1243 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SFSWAPQ12872 951 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 DDB1Q16531 1140 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 BRDTQ58F21 947 aaPredicted RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PRPF38BQ5VTL8 546 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ANO1Q5XXA6 986 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PPP4R3AQ6IN85 833 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 C16orf87Q6PH81 154 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 KSR2Q6VAB6 950 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MMS22LQ6ZRQ5 1243 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 TBC1D9Q6ZT07 1266 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 RIC3Q7Z5B4 369 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PLEKHM2Q8IWE5 1019 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SUGP1Q8IWZ8 645 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 IQCF2Q8IXL9 164 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SPICE1Q8N0Z3 855 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SIX5Q8N196 739 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MYO1HQ8N1T3 1032 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 NKAIN3Q8N8D7 197 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 AFAP1L1Q8TED9 768 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 NUDT16Q96DE0 195 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ZBTB10Q96DT7 871 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 AGAP3Q96P47 875 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SERINC2Q96SA4 455 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MAP7D2Q96T17 732 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 C2orf49Q9BVC5 232 aaPredicted RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 CCDC94Q9BW85 323 aaPredicted RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 TRIM55Q9BYV6 548 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 XPO4Q9C0E2 1151 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 C12orf49Q9H741 205 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SH3GLB2Q9NR46 395 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ATG3Q9NT62 314 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 DCAF16Q9NXF7 216 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PCSK1NQ9UHG2 260 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MCM8Q9UJA3 840 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 FARP1Q9Y4F1 1045 aaPredicted RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 CCDC61Q9Y6R9 512 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ZCCHC6Q5VYS8 1495 aaKnown RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 E2F8A0AVK6 867 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L15C9J2P7 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L10C9JJH3 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L13C9JLJ4 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L12C9JPN9 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L11C9JVI0 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L21D6R901 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L18D6R9N7 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L22D6RA61 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L17D6RBQ6 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L19D6RCP7 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L20D6RJB6 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 K7ENM7 598 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 KIF3CO14782 793 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 COBLO75128 1261 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 KIAA0754O94854 1291 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 IGHDP01880 384 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 OAS2P29728 719 aaKnown RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CNGA1P29973 690 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CAP2P40123 477 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 HTR3AP46098 478 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CCT5P48643 541 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 MASP1P48740 699 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 TPD52P55327 224 aaPredicted RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 DAB2P98082 770 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L24Q0WX57 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 DDX10Q13206 875 aaKnown RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 PTGDRQ13258 359 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 BIRC3Q13489 604 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 PICALMQ13492 652 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 E2F5Q15329 346 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 TTF1Q15361 905 aaPredicted RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 TOMM20Q15388 145 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 Q3C1V9 767 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 MEX3CQ5U5Q3 659 aaKnown RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 KANK3Q6NY19 840 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 MZT2BQ6NZ67 158 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 PDXDC2PQ6P474 469 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 SLC4A10Q6U841 1118 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 C16orf86Q6ZW13 317 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP48Q86UV5 1035 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CCDC144CPQ8IYA2 1237 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 SAMD14Q8IZD0 417 aaPredicted RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 SYNPOQ8N3V7 929 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 EFCAB3Q8N7B9 438 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms