RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PCDHB13Q9Y5F0 798 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 C9IYK1 514 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MPHOSPH10O00566 681 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PRMT3O60678 531 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ALDH1L1O75891 902 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 KIF20AO95235 890 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 RAPGEF3O95398 923 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ABL1P00519 1130 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 P4HBP07237 508 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MSL3P1P0C860 447 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SLC5A1P13866 664 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 HCLS1P14317 486 aaPredicted RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 NAT1P18440 290 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 GJA5P36382 358 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 TNNI2P48788 182 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 EIF4G2P78344 907 aaKnown RBP eCLIP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PURAQ00577 322 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ATP2B2Q01814 1243 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SFSWAPQ12872 951 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 DDB1Q16531 1140 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 BRDTQ58F21 947 aaPredicted RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PRPF38BQ5VTL8 546 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ANO1Q5XXA6 986 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PPP4R3AQ6IN85 833 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 C16orf87Q6PH81 154 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 KSR2Q6VAB6 950 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MMS22LQ6ZRQ5 1243 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 TBC1D9Q6ZT07 1266 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 RIC3Q7Z5B4 369 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PLEKHM2Q8IWE5 1019 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SUGP1Q8IWZ8 645 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 IQCF2Q8IXL9 164 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SPICE1Q8N0Z3 855 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SIX5Q8N196 739 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MYO1HQ8N1T3 1032 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 NKAIN3Q8N8D7 197 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 AFAP1L1Q8TED9 768 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 NUDT16Q96DE0 195 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ZBTB10Q96DT7 871 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 AGAP3Q96P47 875 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SERINC2Q96SA4 455 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MAP7D2Q96T17 732 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 C2orf49Q9BVC5 232 aaPredicted RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 CCDC94Q9BW85 323 aaPredicted RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 TRIM55Q9BYV6 548 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 XPO4Q9C0E2 1151 aaKnown RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 C12orf49Q9H741 205 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 SH3GLB2Q9NR46 395 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ATG3Q9NT62 314 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 DCAF16Q9NXF7 216 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 PCSK1NQ9UHG2 260 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 MCM8Q9UJA3 840 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 FARP1Q9Y4F1 1045 aaPredicted RBP3.31□□□□□ -1.88
UBBP3-201ENST00000445497 CCDC61Q9Y6R9 512 aa3.31□□□□□ -1.88
UBBP3-201ENST00000445497 ZCCHC6Q5VYS8 1495 aaKnown RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 E2F8A0AVK6 867 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L15C9J2P7 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L10C9JJH3 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L13C9JLJ4 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L12C9JPN9 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L11C9JVI0 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L21D6R901 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L18D6R9N7 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L22D6RA61 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L17D6RBQ6 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L19D6RCP7 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L20D6RJB6 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 K7ENM7 598 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 KIF3CO14782 793 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 COBLO75128 1261 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 KIAA0754O94854 1291 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 IGHDP01880 384 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 OAS2P29728 719 aaKnown RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CNGA1P29973 690 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CAP2P40123 477 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 HTR3AP46098 478 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CCT5P48643 541 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 MASP1P48740 699 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 TPD52P55327 224 aaPredicted RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 DAB2P98082 770 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L24Q0WX57 530 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 DDX10Q13206 875 aaKnown RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 PTGDRQ13258 359 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 BIRC3Q13489 604 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 PICALMQ13492 652 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 E2F5Q15329 346 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 TTF1Q15361 905 aaPredicted RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 TOMM20Q15388 145 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 Q3C1V9 767 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 MEX3CQ5U5Q3 659 aaKnown RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 KANK3Q6NY19 840 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 MZT2BQ6NZ67 158 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 PDXDC2PQ6P474 469 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 SLC4A10Q6U841 1118 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 C16orf86Q6ZW13 317 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP48Q86UV5 1035 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CCDC144CPQ8IYA2 1237 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 SAMD14Q8IZD0 417 aaPredicted RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 SYNPOQ8N3V7 929 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 EFCAB3Q8N7B9 438 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms