RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 SSH3Q8TE77 659 aa10.99□□□□□ -0.65
FXR1-203ENST00000445140 PHF14O94880 888 aa10.98□□□□□ -0.65
FXR1-203ENST00000445140 ATP8B2P98198 1209 aa10.98□□□□□ -0.65
FXR1-203ENST00000445140 SLC4A10Q6U841 1118 aa10.98□□□□□ -0.65
FXR1-203ENST00000445140 BRIP1Q9BX63 1249 aa10.98□□□□□ -0.65
FXR1-203ENST00000445140 C9orf78Q9NZ63 289 aaPredicted RBP10.98□□□□□ -0.65
FXR1-203ENST00000445140 NOP58Q9Y2X3 529 aaKnown RBP10.98□□□□□ -0.65
FXR1-203ENST00000445140 SERPINB2P05120 415 aa10.98□□□□□ -0.65
FXR1-203ENST00000445140 NBPF7P0C2Y1 421 aaPredicted RBP10.98□□□□□ -0.65
FXR1-203ENST00000445140 PRR5LQ6MZQ0 368 aa10.98□□□□□ -0.65
FXR1-203ENST00000445140 CEP85Q6P2H3 762 aa10.98□□□□□ -0.65
FXR1-203ENST00000445140 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
FXR1-203ENST00000445140 SPEF2Q9C093 1822 aa10.98□□□□□ -0.65
FXR1-203ENST00000445140 ST5P78524 1137 aa10.97□□□□□ -0.65
FXR1-203ENST00000445140 CNBD1Q8NA66 436 aa10.97□□□□□ -0.65
FXR1-203ENST00000445140 SUCLG2Q96I99 432 aa10.97□□□□□ -0.65
FXR1-203ENST00000445140 ATP5J2-PTCD1G3V325 749 aa10.97□□□□□ -0.65
FXR1-203ENST00000445140 CTSWP56202 376 aa10.97□□□□□ -0.65
FXR1-203ENST00000445140 EXOC6Q8TAG9 804 aa10.97□□□□□ -0.65
FXR1-203ENST00000445140 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
FXR1-203ENST00000445140 PARP3Q9Y6F1 533 aa10.97□□□□□ -0.65
FXR1-203ENST00000445140 IRS4O14654 1257 aaPredicted RBP10.96□□□□□ -0.65
FXR1-203ENST00000445140 HMMRO75330 724 aa10.96□□□□□ -0.65
FXR1-203ENST00000445140 CIAO1O76071 339 aa10.96□□□□□ -0.65
FXR1-203ENST00000445140 RFX5P48382 616 aaPredicted RBP10.96□□□□□ -0.65
FXR1-203ENST00000445140 NBPF5PQ86XG9 351 aaPredicted RBP10.96□□□□□ -0.65
FXR1-203ENST00000445140 COPRSQ9NQ92 184 aa10.96□□□□□ -0.65
FXR1-203ENST00000445140 ZNF330Q9Y3S2 320 aaPredicted RBP10.96□□□□□ -0.65
FXR1-203ENST00000445140 DUOX1Q9NRD9 1551 aa10.96□□□□□ -0.66
FXR1-203ENST00000445140 UBE3BQ7Z3V4 1068 aa10.96□□□□□ -0.66
FXR1-203ENST00000445140 CRAMP1Q96RY5 1269 aa10.96□□□□□ -0.66
FXR1-203ENST00000445140 KDM2BQ8NHM5 1336 aa10.96□□□□□ -0.66
FXR1-203ENST00000445140 SNED1Q8TER0 1413 aa10.96□□□□□ -0.66
FXR1-203ENST00000445140 MMP10P09238 476 aa10.95□□□□□ -0.66
FXR1-203ENST00000445140 PTGER2P43116 358 aa10.95□□□□□ -0.66
FXR1-203ENST00000445140 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
FXR1-203ENST00000445140 PPP4R2Q9NY27 417 aa10.95□□□□□ -0.66
FXR1-203ENST00000445140 GPTP24298 496 aa10.95□□□□□ -0.66
FXR1-203ENST00000445140 PDE6BP35913 854 aa10.95□□□□□ -0.66
FXR1-203ENST00000445140 TTLL11Q8NHH1 800 aa10.95□□□□□ -0.66
FXR1-203ENST00000445140 CD2APQ9Y5K6 639 aa10.95□□□□□ -0.66
FXR1-203ENST00000445140 LRRFIP2Q9Y608 721 aaKnown RBP10.95□□□□□ -0.66
FXR1-203ENST00000445140 ERFEQ4G0M1 354 aa10.94□□□□□ -0.66
FXR1-203ENST00000445140 CCDC152Q4G0S7 254 aa10.94□□□□□ -0.66
FXR1-203ENST00000445140 GRIPAP1Q4V328 841 aa10.94□□□□□ -0.66
FXR1-203ENST00000445140 SMC5Q8IY18 1101 aa10.94□□□□□ -0.66
FXR1-203ENST00000445140 BICC1Q9H694 974 aaKnown RBP10.94□□□□□ -0.66
FXR1-203ENST00000445140 ECM2O94769 699 aaPredicted RBP10.94□□□□□ -0.66
FXR1-203ENST00000445140 TGFB2P61812 414 aa10.94□□□□□ -0.66
FXR1-203ENST00000445140 HSP90AB4PQ58FF6 505 aa10.94□□□□□ -0.66
FXR1-203ENST00000445140 GCC1Q96CN9 775 aa10.94□□□□□ -0.66
FXR1-203ENST00000445140 POLD1P28340 1107 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 SIRT2Q8IXJ6 389 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 RAB11FIP3O75154 756 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 R3HDM1Q15032 1099 aaKnown RBP10.93□□□□□ -0.66
FXR1-203ENST00000445140 EPHA10Q5JZY3 1008 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 FAM89AQ96GI7 184 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 NLRP3Q96P20 1036 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 DCTPP1Q9H773 170 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 GPR108Q9NPR9 543 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 PCDHB15Q9Y5E8 787 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 FER1L6Q2WGJ9 1857 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 PSME4Q14997 1843 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 COL4A1P02462 1669 aa10.93□□□□□ -0.66
FXR1-203ENST00000445140 SMIM5Q71RC9 77 aa10.92□□□□□ -0.66
FXR1-203ENST00000445140 RWDD1Q9H446 243 aaPredicted RBP10.92□□□□□ -0.66
FXR1-203ENST00000445140 NPR1P16066 1061 aa10.92□□□□□ -0.66
FXR1-203ENST00000445140 ERC1Q8IUD2 1116 aa10.92□□□□□ -0.66
FXR1-203ENST00000445140 CACNA1SQ13698 1873 aa10.92□□□□□ -0.66
FXR1-203ENST00000445140 CENPQQ7L2Z9 268 aaPredicted RBP10.92□□□□□ -0.66
FXR1-203ENST00000445140 CDC5LQ99459 802 aaKnown RBP10.92□□□□□ -0.66
FXR1-203ENST00000445140 SPON1Q9HCB6 807 aa10.92□□□□□ -0.66
FXR1-203ENST00000445140 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
FXR1-203ENST00000445140 PTPN12Q05209 780 aaKnown RBP10.91□□□□□ -0.66
FXR1-203ENST00000445140 ZNF646O15015 1829 aaPredicted RBP10.91□□□□□ -0.66
FXR1-203ENST00000445140 SRGNP10124 158 aa10.91□□□□□ -0.66
FXR1-203ENST00000445140 GRAPQ13588 217 aa10.91□□□□□ -0.66
FXR1-203ENST00000445140 GRAPLQ8TC17 118 aaPredicted RBP10.91□□□□□ -0.66
FXR1-203ENST00000445140 ANKRD18BA2A2Z9 1011 aa10.9□□□□□ -0.66
FXR1-203ENST00000445140 BBOX1O75936 387 aa10.9□□□□□ -0.66
FXR1-203ENST00000445140 CC2D2BQ6DHV5 1058 aa10.9□□□□□ -0.66
FXR1-203ENST00000445140 LMBR1LQ6UX01 489 aa10.9□□□□□ -0.66
FXR1-203ENST00000445140 C15orf52Q6ZUT6 534 aaKnown RBP10.9□□□□□ -0.66
FXR1-203ENST00000445140 MASTLQ96GX5 879 aa10.9□□□□□ -0.66
FXR1-203ENST00000445140 RBM17Q96I25 401 aaKnown RBP10.9□□□□□ -0.66
FXR1-203ENST00000445140 BSDC1Q9NW68 430 aaPredicted RBP10.9□□□□□ -0.66
FXR1-203ENST00000445140 IFIT5Q13325 482 aaKnown RBP10.9□□□□□ -0.67
FXR1-203ENST00000445140 PDGFDQ9GZP0 370 aaPredicted RBP10.9□□□□□ -0.67
FXR1-203ENST00000445140 SLX4Q8IY92 1834 aa10.9□□□□□ -0.67
FXR1-203ENST00000445140 TAF1P21675 1872 aa10.89□□□□□ -0.67
FXR1-203ENST00000445140 MROH5Q6ZUA9 1318 aa10.89□□□□□ -0.67
FXR1-203ENST00000445140 ZNF609O15014 1411 aa10.89□□□□□ -0.67
FXR1-203ENST00000445140 DICER1Q9UPY3 1922 aaKnown RBP10.89□□□□□ -0.67
FXR1-203ENST00000445140 PNMA6EA0A0J9YXQ4 647 aa10.89□□□□□ -0.67
FXR1-203ENST00000445140 IGSF3O75054 1194 aa10.89□□□□□ -0.67
FXR1-203ENST00000445140 IL15P40933 162 aaPredicted RBP10.89□□□□□ -0.67
FXR1-203ENST00000445140 ALDH1B1P30837 517 aa10.89□□□□□ -0.67
FXR1-203ENST00000445140 NUTM1Q86Y26 1132 aa10.89□□□□□ -0.67
FXR1-203ENST00000445140 EYA2O00167 538 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 MSH5O43196 834 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms