RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 RTL9Q8NET4 1388 aa18.87■□□□□ 0.61
CCNE1-203ENST00000444983 IGHDP01880 384 aa18.87■□□□□ 0.61
CCNE1-203ENST00000444983 RFX5P48382 616 aaPredicted RBP18.87■□□□□ 0.61
CCNE1-203ENST00000444983 SRGAP3O43295 1099 aa18.86■□□□□ 0.61
CCNE1-203ENST00000444983 ST5P78524 1137 aa18.86■□□□□ 0.61
CCNE1-203ENST00000444983 CRY2Q49AN0 593 aa18.86■□□□□ 0.61
CCNE1-203ENST00000444983 NLRP3Q96P20 1036 aa18.86■□□□□ 0.61
CCNE1-203ENST00000444983 BRIP1Q9BX63 1249 aa18.86■□□□□ 0.61
CCNE1-203ENST00000444983 ATF5Q9Y2D1 282 aaPredicted RBP18.86■□□□□ 0.61
CCNE1-203ENST00000444983 PTGER2P43116 358 aa18.85■□□□□ 0.61
CCNE1-203ENST00000444983 KIF13BQ9NQT8 1826 aa18.85■□□□□ 0.61
CCNE1-203ENST00000444983 GREM2Q9H772 168 aa18.85■□□□□ 0.61
CCNE1-203ENST00000444983 NPHP1O15259 732 aa18.84■□□□□ 0.61
CCNE1-203ENST00000444983 FAM161AQ3B820 660 aa18.84■□□□□ 0.61
CCNE1-203ENST00000444983 RWDD1Q9H446 243 aaPredicted RBP18.84■□□□□ 0.61
CCNE1-203ENST00000444983 C10orf71Q711Q0 1435 aa18.84■□□□□ 0.61
CCNE1-203ENST00000444983 HMMRO75330 724 aa18.83■□□□□ 0.61
CCNE1-203ENST00000444983 PTPN12Q05209 780 aaKnown RBP18.83■□□□□ 0.61
CCNE1-203ENST00000444983 CCDC152Q4G0S7 254 aa18.83■□□□□ 0.61
CCNE1-203ENST00000444983 CCDC136Q96JN2 1154 aa18.83■□□□□ 0.61
CCNE1-203ENST00000444983 DCTPP1Q9H773 170 aa18.83■□□□□ 0.61
CCNE1-203ENST00000444983 COPRSQ9NQ92 184 aa18.83■□□□□ 0.61
CCNE1-203ENST00000444983 KDM2BQ8NHM5 1336 aa18.83■□□□□ 0.61
CCNE1-203ENST00000444983 COL4A1P02462 1669 aa18.83■□□□□ 0.6
CCNE1-203ENST00000444983 B4GALNT3Q6L9W6 998 aa18.82■□□□□ 0.6
CCNE1-203ENST00000444983 NOP58Q9Y2X3 529 aaKnown RBP18.82■□□□□ 0.6
CCNE1-203ENST00000444983 ITGA6P23229 1130 aa18.82■□□□□ 0.6
CCNE1-203ENST00000444983 POLD1P28340 1107 aa18.82■□□□□ 0.6
CCNE1-203ENST00000444983 CCDC85AQ96PX6 553 aaPredicted RBP18.82■□□□□ 0.6
CCNE1-203ENST00000444983 TAF1P21675 1872 aa18.81■□□□□ 0.6
CCNE1-203ENST00000444983 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
CCNE1-203ENST00000444983 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
CCNE1-203ENST00000444983 CCDC57Q2TAC2 916 aa18.81■□□□□ 0.6
CCNE1-203ENST00000444983 SMC5Q8IY18 1101 aa18.81■□□□□ 0.6
CCNE1-203ENST00000444983 COL11A2P13942 1736 aaPredicted RBP18.8■□□□□ 0.6
CCNE1-203ENST00000444983 PDE6BP35913 854 aa18.8■□□□□ 0.6
CCNE1-203ENST00000444983 KLHDC4Q8TBB5 520 aa18.8■□□□□ 0.6
CCNE1-203ENST00000444983 SEC31BQ9NQW1 1179 aa18.8■□□□□ 0.6
CCNE1-203ENST00000444983 CHMP3Q9Y3E7 222 aa18.8■□□□□ 0.6
CCNE1-203ENST00000444983 LRP5O75197 1615 aa18.8■□□□□ 0.6
CCNE1-203ENST00000444983 SRGNP10124 158 aa18.79■□□□□ 0.6
CCNE1-203ENST00000444983 PA2G4Q9UQ80 394 aaKnown RBP18.79■□□□□ 0.6
CCNE1-203ENST00000444983 ANKRD18BA2A2Z9 1011 aa18.79■□□□□ 0.6
CCNE1-203ENST00000444983 GCC1Q96CN9 775 aa18.79■□□□□ 0.6
CCNE1-203ENST00000444983 ZNF594Q96JF6 807 aaPredicted RBP18.79■□□□□ 0.6
CCNE1-203ENST00000444983 SPON1Q9HCB6 807 aa18.79■□□□□ 0.6
CCNE1-203ENST00000444983 KIAA1551Q9HCM1 1747 aa18.79■□□□□ 0.6
CCNE1-203ENST00000444983 FBXO3Q9UK99 471 aa18.78■□□□□ 0.6
CCNE1-203ENST00000444983 CENPQQ7L2Z9 268 aaPredicted RBP18.77■□□□□ 0.6
CCNE1-203ENST00000444983 PDZRN3Q9UPQ7 1066 aa18.77■□□□□ 0.6
CCNE1-203ENST00000444983 DLEC1Q9Y238 1755 aa18.77■□□□□ 0.6
CCNE1-203ENST00000444983 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
CCNE1-203ENST00000444983 ATG9AQ7Z3C6 839 aa18.76■□□□□ 0.59
CCNE1-203ENST00000444983 CELF1Q92879 486 aaKnown RBP18.76■□□□□ 0.59
CCNE1-203ENST00000444983 CRAMP1Q96RY5 1269 aa18.76■□□□□ 0.59
CCNE1-203ENST00000444983 EXOC6BQ9Y2D4 811 aa18.76■□□□□ 0.59
CCNE1-203ENST00000444983 CIAO1O76071 339 aa18.76■□□□□ 0.59
CCNE1-203ENST00000444983 DDX46Q7L014 1031 aaKnown RBP18.76■□□□□ 0.59
CCNE1-203ENST00000444983 CDC5LQ99459 802 aaKnown RBP18.76■□□□□ 0.59
CCNE1-203ENST00000444983 RIPOR2Q9Y4F9 1068 aa18.76■□□□□ 0.59
CCNE1-203ENST00000444983 EYA2O00167 538 aa18.75■□□□□ 0.59
CCNE1-203ENST00000444983 NPR1P16066 1061 aa18.75■□□□□ 0.59
CCNE1-203ENST00000444983 RPS8P62241 208 aaKnown RBP18.75■□□□□ 0.59
CCNE1-203ENST00000444983 RPGRQ92834 1020 aaKnown RBP18.75■□□□□ 0.59
CCNE1-203ENST00000444983 PUS3Q9BZE2 481 aaKnown RBP18.75■□□□□ 0.59
CCNE1-203ENST00000444983 SASH1O94885 1247 aa18.74■□□□□ 0.59
CCNE1-203ENST00000444983 GRAPQ13588 217 aa18.74■□□□□ 0.59
CCNE1-203ENST00000444983 LRRC24Q50LG9 513 aa18.74■□□□□ 0.59
CCNE1-203ENST00000444983 GRAPLQ8TC17 118 aaPredicted RBP18.74■□□□□ 0.59
CCNE1-203ENST00000444983 MASTLQ96GX5 879 aa18.74■□□□□ 0.59
CCNE1-203ENST00000444983 RBM17Q96I25 401 aaKnown RBP18.74■□□□□ 0.59
CCNE1-203ENST00000444983 BSDC1Q9NW68 430 aaPredicted RBP18.74■□□□□ 0.59
CCNE1-203ENST00000444983 CD2APQ9Y5K6 639 aa18.74■□□□□ 0.59
CCNE1-203ENST00000444983 SPEF2Q9C093 1822 aa18.74■□□□□ 0.59
CCNE1-203ENST00000444983 H0YIN7 160 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 RAB11FIP3O75154 756 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 KCNA3P22001 575 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 TGFB2P61812 414 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 HSP90AB4PQ58FF6 505 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 STYK1Q6J9G0 422 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 LDHAL6AQ6ZMR3 332 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 C2CD5Q86YS7 1000 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 SIL1Q9H173 461 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 CHRNA5P30532 468 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 ANKRD18AQ8IVF6 992 aa18.73■□□□□ 0.59
CCNE1-203ENST00000444983 IGHMBP2P38935 993 aaKnown RBP18.72■□□□□ 0.59
CCNE1-203ENST00000444983 IL15P40933 162 aaPredicted RBP18.72■□□□□ 0.59
CCNE1-203ENST00000444983 G3BP1Q13283 466 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCNE1-203ENST00000444983 TAF7LQ5H9L4 462 aa18.72■□□□□ 0.59
CCNE1-203ENST00000444983 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.72■□□□□ 0.59
CCNE1-203ENST00000444983 A0A1B0GUL6 1792 aa18.71■□□□□ 0.59
CCNE1-203ENST00000444983 BBOX1O75936 387 aa18.71■□□□□ 0.59
CCNE1-203ENST00000444983 ALDH1B1P30837 517 aa18.71■□□□□ 0.59
CCNE1-203ENST00000444983 NUCB1Q02818 461 aa18.71■□□□□ 0.59
CCNE1-203ENST00000444983 VGLL2Q8N8G2 317 aa18.71■□□□□ 0.59
CCNE1-203ENST00000444983 RHPN1Q8TCX5 695 aa18.71■□□□□ 0.59
CCNE1-203ENST00000444983 MPHOSPH8Q99549 860 aa18.71■□□□□ 0.59
CCNE1-203ENST00000444983 BRCA1P38398 1863 aaKnown RBP18.71■□□□□ 0.59
CCNE1-203ENST00000444983 ERC1Q8IUD2 1116 aa18.7■□□□□ 0.58
CCNE1-203ENST00000444983 KIF1BPQ96EK5 621 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms