RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
HCFC1-203ENST00000444191 CEP57L1Q8IYX8 460 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 NFATC2IPQ8NCF5 419 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 DBNDD2Q9BQY9 259 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 NEXMIFQ5QGS0 1516 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 TMC6Q7Z403 805 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 KAT6BQ8WYB5 2073 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 SERPINC1P01008 464 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 TERF1P54274 439 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 RRP12Q5JTH9 1297 aaKnown RBP13.65□□□□□ -0.22
HCFC1-203ENST00000444191 TTC41PQ6P2S7 1318 aa13.65□□□□□ -0.22
HCFC1-203ENST00000444191 ZC3H13Q5T200 1668 aaKnown RBP13.65□□□□□ -0.22
HCFC1-203ENST00000444191 ADGRB2O60241 1585 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 RXRAP19793 462 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 MNS1Q8NEH6 495 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 TNRQ92752 1358 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 ALKQ9UM73 1620 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 MARCKSP29966 332 aaPredicted RBP13.64□□□□□ -0.23
HCFC1-203ENST00000444191 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 ATP2B3Q16720 1220 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 MRVI1Q9Y6F6 885 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 SBNO1A3KN83 1393 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 ATP7BP35670 1465 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 PLEKHG3A1L390 1219 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 AP5Z1O43299 807 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 LMOD1P29536 600 aaPredicted RBP13.64□□□□□ -0.23
HCFC1-203ENST00000444191 LMBR1LQ6UX01 489 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 KIAA1524Q8TCG1 905 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 NAT10Q9H0A0 1025 aaKnown RBP13.64□□□□□ -0.23
HCFC1-203ENST00000444191 ZSWIM6Q9HCJ5 1215 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 MROH1Q8NDA8 1641 aa13.64□□□□□ -0.23
HCFC1-203ENST00000444191 PES1O00541 588 aaKnown RBP13.63□□□□□ -0.23
HCFC1-203ENST00000444191 ANKRD24Q8TF21 1146 aa13.63□□□□□ -0.23
HCFC1-203ENST00000444191 ZNF396Q96N95 335 aaPredicted RBP13.63□□□□□ -0.23
HCFC1-203ENST00000444191 RPAP1Q9BWH6 1393 aaPredicted RBP13.63□□□□□ -0.23
HCFC1-203ENST00000444191 SKIDA1Q1XH10 827 aa13.63□□□□□ -0.23
HCFC1-203ENST00000444191 LINS1Q8NG48 757 aa13.63□□□□□ -0.23
HCFC1-203ENST00000444191 TTC14Q96N46 770 aa13.63□□□□□ -0.23
HCFC1-203ENST00000444191 TTC21AQ8NDW8 1320 aa13.63□□□□□ -0.23
HCFC1-203ENST00000444191 CCDC69A6NI79 296 aa13.63□□□□□ -0.23
HCFC1-203ENST00000444191 VGLL3A8MV65 326 aa13.63□□□□□ -0.23
HCFC1-203ENST00000444191 POLR3GO15318 223 aaPredicted RBP13.62□□□□□ -0.23
HCFC1-203ENST00000444191 ZNF75DP51815 510 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 TRDNQ13061 729 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 KRT32Q14532 448 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 THEMISQ8N1K5 641 aaPredicted RBP13.62□□□□□ -0.23
HCFC1-203ENST00000444191 CABLES1Q8TDN4 633 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 HECW2Q9P2P5 1572 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 CFAP100Q494V2 611 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 CACTINQ8WUQ7 758 aaKnown RBP13.62□□□□□ -0.23
HCFC1-203ENST00000444191 KCNF1Q9H3M0 494 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 PTPDC1A2A3K4 754 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 ZSCAN25Q6NSZ9 544 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 ZSWIM4Q9H7M6 989 aa13.62□□□□□ -0.23
HCFC1-203ENST00000444191 VWDEQ8N2E2 1590 aa13.61□□□□□ -0.23
HCFC1-203ENST00000444191 SASH1O94885 1247 aa13.61□□□□□ -0.23
HCFC1-203ENST00000444191 IFIT1P09914 478 aaKnown RBP13.61□□□□□ -0.23
HCFC1-203ENST00000444191 ZNF594Q96JF6 807 aaPredicted RBP13.61□□□□□ -0.23
HCFC1-203ENST00000444191 IGSF1Q8N6C5 1336 aa13.61□□□□□ -0.23
HCFC1-203ENST00000444191 URI1O94763 535 aaPredicted RBP13.6□□□□□ -0.23
HCFC1-203ENST00000444191 SFPQP23246 707 aaKnown RBP eCLIP13.6□□□□□ -0.23
HCFC1-203ENST00000444191 CABP4P57796 275 aa13.6□□□□□ -0.23
HCFC1-203ENST00000444191 KIF18AQ8NI77 898 aa13.6□□□□□ -0.23
HCFC1-203ENST00000444191 C8orf76Q96K31 380 aa13.6□□□□□ -0.23
HCFC1-203ENST00000444191 CPSF1Q10570 1443 aaKnown RBP13.6□□□□□ -0.23
HCFC1-203ENST00000444191 CRB1P82279 1406 aa13.6□□□□□ -0.23
HCFC1-203ENST00000444191 STX1AQ16623 288 aa13.6□□□□□ -0.23
HCFC1-203ENST00000444191 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
HCFC1-203ENST00000444191 ANO10Q9NW15 660 aa13.6□□□□□ -0.23
HCFC1-203ENST00000444191 GOLGA8BA8MQT2 603 aa13.6□□□□□ -0.23
HCFC1-203ENST00000444191 PPLO60437 1756 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 DEPDC5O75140 1603 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
HCFC1-203ENST00000444191 DMTNQ08495 405 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 TTC39AQ5SRH9 613 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 IDH1O75874 414 aaKnown RBP13.59□□□□□ -0.23
HCFC1-203ENST00000444191 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 C11orf57Q6ZUT1 292 aaPredicted RBP13.59□□□□□ -0.23
HCFC1-203ENST00000444191 CLSTN2Q9H4D0 955 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 GJB4Q9NTQ9 266 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 IFNKQ9P0W0 207 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
HCFC1-203ENST00000444191 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
HCFC1-203ENST00000444191 TRIM29Q14134 588 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 NECTIN1Q15223 517 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 ELF2Q15723 593 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 SYT10Q6XYQ8 523 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 USP28Q96RU2 1077 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
HCFC1-203ENST00000444191 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.59□□□□□ -0.23
HCFC1-203ENST00000444191 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
HCFC1-203ENST00000444191 USP6P35125 1406 aa13.59□□□□□ -0.23
HCFC1-203ENST00000444191 ARHGEF10O15013 1369 aa13.58□□□□□ -0.23
HCFC1-203ENST00000444191 GIGYF1O75420 1035 aaPredicted RBP13.58□□□□□ -0.23
HCFC1-203ENST00000444191 MCMDC2Q4G0Z9 681 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms