RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 C14orf37Q86TY3 774 aa18.23■□□□□ 0.51
AP1S3-206ENST00000443700 CKAP2LQ8IYA6 745 aa18.23■□□□□ 0.51
AP1S3-206ENST00000443700 KCNH5Q8NCM2 988 aa18.23■□□□□ 0.51
AP1S3-206ENST00000443700 EAF2Q96CJ1 260 aaPredicted RBP18.23■□□□□ 0.51
AP1S3-206ENST00000443700 CFAP45Q9UL16 551 aa18.23■□□□□ 0.51
AP1S3-206ENST00000443700 PAXBP1Q9Y5B6 917 aa18.23■□□□□ 0.51
AP1S3-206ENST00000443700 RNMTO43148 476 aaKnown RBP18.22■□□□□ 0.51
AP1S3-206ENST00000443700 NEMFO60524 1076 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 ZSCAN20P17040 1043 aaPredicted RBP18.22■□□□□ 0.51
AP1S3-206ENST00000443700 NBPF6Q5VWK0 638 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 DDX54Q8TDD1 881 aaKnown RBP18.22■□□□□ 0.51
AP1S3-206ENST00000443700 GTF3C6Q969F1 213 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 SUCLG2Q96I99 432 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 NBPF4Q96M43 638 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 FEZ1Q99689 392 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 PRDM10Q9NQV6 1147 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 CTAGE5O15320 804 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 ZNF165P49910 485 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 USPL1Q5W0Q7 1092 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 ZSCAN25Q6NSZ9 544 aa18.22■□□□□ 0.51
AP1S3-206ENST00000443700 CBX1P83916 185 aa18.21■□□□□ 0.51
AP1S3-206ENST00000443700 RESTQ13127 1097 aa18.21■□□□□ 0.51
AP1S3-206ENST00000443700 CWF19L2Q2TBE0 894 aaKnown RBP18.21■□□□□ 0.51
AP1S3-206ENST00000443700 SARM1Q6SZW1 724 aa18.21■□□□□ 0.51
AP1S3-206ENST00000443700 CCDC8Q9H0W5 538 aaPredicted RBP18.21■□□□□ 0.51
AP1S3-206ENST00000443700 BICC1Q9H694 974 aaKnown RBP18.21■□□□□ 0.51
AP1S3-206ENST00000443700 CLIP2Q9UDT6 1046 aa18.21■□□□□ 0.51
AP1S3-206ENST00000443700 GOLGA6L19H0YKK7 550 aa18.2■□□□□ 0.5
AP1S3-206ENST00000443700 FAM173BQ6P4H8 233 aa18.2■□□□□ 0.5
AP1S3-206ENST00000443700 U3KPZ7 1027 aaPredicted RBP18.2■□□□□ 0.5
AP1S3-206ENST00000443700 PXDNQ92626 1479 aa18.2■□□□□ 0.5
AP1S3-206ENST00000443700 FER1L4A9Z1Z3 1794 aa18.2■□□□□ 0.5
AP1S3-206ENST00000443700 H3BQV1 296 aa18.19■□□□□ 0.5
AP1S3-206ENST00000443700 IFFO2Q5TF58 517 aa18.19■□□□□ 0.5
AP1S3-206ENST00000443700 THEMISQ8N1K5 641 aaPredicted RBP18.19■□□□□ 0.5
AP1S3-206ENST00000443700 BOLA2Q9H3K6 86 aa18.19■□□□□ 0.5
AP1S3-206ENST00000443700 CGNQ9P2M7 1197 aaKnown RBP18.19■□□□□ 0.5
AP1S3-206ENST00000443700 PHF8Q9UPP1 1060 aa18.19■□□□□ 0.5
AP1S3-206ENST00000443700 NR1I2O75469 434 aa18.19■□□□□ 0.5
AP1S3-206ENST00000443700 TNNT1P13805 278 aa18.19■□□□□ 0.5
AP1S3-206ENST00000443700 ATP2B3Q16720 1220 aa18.19■□□□□ 0.5
AP1S3-206ENST00000443700 MPRIPQ6WCQ1 1025 aa18.19■□□□□ 0.5
AP1S3-206ENST00000443700 NEK1Q96PY6 1258 aa18.19■□□□□ 0.5
AP1S3-206ENST00000443700 LLPHQ9BRT6 129 aaKnown RBP18.19■□□□□ 0.5
AP1S3-206ENST00000443700 DDX21Q9NR30 783 aaKnown RBP eCLIP18.19■□□□□ 0.5
AP1S3-206ENST00000443700 TFIP11Q9UBB9 837 aaKnown RBP18.19■□□□□ 0.5
AP1S3-206ENST00000443700 FAM177BA6PVY3 158 aa18.18■□□□□ 0.5
AP1S3-206ENST00000443700 TAF5LO75529 589 aa18.18■□□□□ 0.5
AP1S3-206ENST00000443700 NEXNQ0ZGT2 675 aa18.18■□□□□ 0.5
AP1S3-206ENST00000443700 STK3Q13188 491 aa18.18■□□□□ 0.5
AP1S3-206ENST00000443700 STX1AQ16623 288 aa18.18■□□□□ 0.5
AP1S3-206ENST00000443700 BRF1Q92994 677 aa18.18■□□□□ 0.5
AP1S3-206ENST00000443700 MRFAP1L1Q96HT8 127 aa18.18■□□□□ 0.5
AP1S3-206ENST00000443700 DNAJC25Q9H1X3 360 aa18.18■□□□□ 0.5
AP1S3-206ENST00000443700 TLR7Q9NYK1 1049 aaKnown RBP18.18■□□□□ 0.5
AP1S3-206ENST00000443700 KIF20AO95235 890 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 HSP90B1P14625 803 aaKnown RBP18.17■□□□□ 0.5
AP1S3-206ENST00000443700 NCBP1Q09161 790 aaKnown RBP18.17■□□□□ 0.5
AP1S3-206ENST00000443700 PROSER3Q2NL68 480 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 ATL3Q6DD88 541 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 CCDC112Q8NEF3 446 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 KAZALD1Q96I82 304 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 PGBD1Q96JS3 809 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 C16orf45Q96MC5 204 aaPredicted RBP18.17■□□□□ 0.5
AP1S3-206ENST00000443700 TCEANC2Q96MN5 208 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 LAMA4Q16363 1823 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 C5P01031 1676 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 SETD1BQ9UPS6 1966 aaKnown RBP18.17■□□□□ 0.5
AP1S3-206ENST00000443700 SLIT3O75094 1523 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 AFDNP55196 1824 aaKnown RBP18.17■□□□□ 0.5
AP1S3-206ENST00000443700 DTNBO60941 627 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 ATP5JP18859 108 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 LRMPQ12912 555 aa18.17■□□□□ 0.5
AP1S3-206ENST00000443700 TPD52L1Q16890 204 aaPredicted RBP18.17■□□□□ 0.5
AP1S3-206ENST00000443700 ZNF589Q86UQ0 364 aaPredicted RBP18.17■□□□□ 0.5
AP1S3-206ENST00000443700 HMGB1P09429 215 aaKnown RBP18.16■□□□□ 0.5
AP1S3-206ENST00000443700 NAA16Q6N069 864 aaPredicted RBP18.16■□□□□ 0.5
AP1S3-206ENST00000443700 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
AP1S3-206ENST00000443700 OGFRQ9NZT2 677 aa18.16■□□□□ 0.5
AP1S3-206ENST00000443700 KCNA6P17658 529 aa18.15■□□□□ 0.5
AP1S3-206ENST00000443700 CCDC73Q6ZRK6 1079 aa18.14■□□□□ 0.5
AP1S3-206ENST00000443700 Q6ZUG5 572 aa18.14■□□□□ 0.5
AP1S3-206ENST00000443700 SMARCC2Q8TAQ2 1214 aa18.14■□□□□ 0.5
AP1S3-206ENST00000443700 SIL1Q9H173 461 aa18.14■□□□□ 0.5
AP1S3-206ENST00000443700 NRBP1Q9UHY1 535 aa18.14■□□□□ 0.5
AP1S3-206ENST00000443700 JAK2O60674 1132 aa18.14■□□□□ 0.49
AP1S3-206ENST00000443700 U2AF2P26368 475 aaKnown RBP eCLIP18.14■□□□□ 0.49
AP1S3-206ENST00000443700 RBM6P78332 1123 aaKnown RBP18.14■□□□□ 0.49
AP1S3-206ENST00000443700 IQCB1Q15051 598 aa18.14■□□□□ 0.49
AP1S3-206ENST00000443700 RIC3Q7Z5B4 369 aa18.14■□□□□ 0.49
AP1S3-206ENST00000443700 ZNF396Q96N95 335 aaPredicted RBP18.14■□□□□ 0.49
AP1S3-206ENST00000443700 COL15A1P39059 1388 aa18.14■□□□□ 0.49
AP1S3-206ENST00000443700 SCN11AQ9UI33 1791 aa18.13■□□□□ 0.49
AP1S3-206ENST00000443700 CEP135Q66GS9 1140 aa18.13■□□□□ 0.49
AP1S3-206ENST00000443700 TICAM2Q86XR7 235 aa18.13■□□□□ 0.49
AP1S3-206ENST00000443700 CACTINQ8WUQ7 758 aaKnown RBP18.13■□□□□ 0.49
AP1S3-206ENST00000443700 COPRSQ9NQ92 184 aa18.13■□□□□ 0.49
AP1S3-206ENST00000443700 ANO10Q9NW15 660 aa18.13■□□□□ 0.49
AP1S3-206ENST00000443700 TAF6LQ9Y6J9 622 aa18.13■□□□□ 0.49
AP1S3-206ENST00000443700 KIF1AQ12756 1690 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms