RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 MORC2Q9Y6X9 1032 aaPredicted RBP10.58□□□□□ -0.72
LDB2-202ENST00000441778 JCADQ9P266 1359 aa10.58□□□□□ -0.72
LDB2-202ENST00000441778 ERBB3P21860 1342 aa10.58□□□□□ -0.72
LDB2-202ENST00000441778 SLFN14P0C7P3 912 aa10.58□□□□□ -0.72
LDB2-202ENST00000441778 NLRP6P59044 892 aa10.58□□□□□ -0.72
LDB2-202ENST00000441778 SARM1Q6SZW1 724 aa10.58□□□□□ -0.72
LDB2-202ENST00000441778 NYAP1Q6ZVC0 841 aa10.58□□□□□ -0.72
LDB2-202ENST00000441778 ERC1Q8IUD2 1116 aa10.58□□□□□ -0.72
LDB2-202ENST00000441778 DDX11Q96FC9 970 aa10.58□□□□□ -0.72
LDB2-202ENST00000441778 CCDC8Q9H0W5 538 aaPredicted RBP10.58□□□□□ -0.72
LDB2-202ENST00000441778 USP54Q70EL1 1684 aa10.58□□□□□ -0.72
LDB2-202ENST00000441778 LAMA4Q16363 1823 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 RGPD2P0DJD1 1756 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 TNRQ92752 1358 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 HOXB7P09629 217 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 RBM6P78332 1123 aaKnown RBP10.57□□□□□ -0.72
LDB2-202ENST00000441778 KMT5BQ4FZB7 885 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 BRF1Q92994 677 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.57□□□□□ -0.72
LDB2-202ENST00000441778 ZNF215Q9UL58 517 aaPredicted RBP10.57□□□□□ -0.72
LDB2-202ENST00000441778 V9GYY5 206 aaPredicted RBP10.57□□□□□ -0.72
LDB2-202ENST00000441778 A0A087WWV3 80 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 HIP1O00291 1037 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 GIGYF1O75420 1035 aaPredicted RBP10.57□□□□□ -0.72
LDB2-202ENST00000441778 CCZ1BP86790 482 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 CCZ1P86791 482 aaPredicted RBP10.57□□□□□ -0.72
LDB2-202ENST00000441778 CWF19L2Q2TBE0 894 aaKnown RBP10.57□□□□□ -0.72
LDB2-202ENST00000441778 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 GTF3C6Q969F1 213 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 FSD1Q9BTV5 496 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 BOLA2Q9H3K6 86 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 MAP3K2Q9Y2U5 619 aa10.57□□□□□ -0.72
LDB2-202ENST00000441778 LMO7Q8WWI1 1683 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 COL15A1P39059 1388 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
LDB2-202ENST00000441778 LTKP29376 864 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 PROSER3Q2NL68 480 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 ZNF397Q8NF99 534 aaPredicted RBP10.56□□□□□ -0.72
LDB2-202ENST00000441778 MRFAP1L1Q96HT8 127 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 KAZALD1Q96I82 304 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 C9orf78Q9NZ63 289 aaPredicted RBP10.56□□□□□ -0.72
LDB2-202ENST00000441778 USP16Q9Y5T5 823 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 PLEKHG1Q9ULL1 1385 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 GOLGA6L19H0YKK7 550 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 SLC26A8Q96RN1 970 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 GOLPH3LQ9H4A5 285 aa10.56□□□□□ -0.72
LDB2-202ENST00000441778 CCDC69A6NI79 296 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 CAVIN2O95810 425 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 SKILP12757 684 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 CEBPZQ03701 1054 aaKnown RBP10.55□□□□□ -0.72
LDB2-202ENST00000441778 PTPN14Q15678 1187 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 TSGA10IPQ3SY00 556 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 EDC3Q96F86 508 aaKnown RBP10.55□□□□□ -0.72
LDB2-202ENST00000441778 SUCLG2Q96I99 432 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 FTOQ9C0B1 505 aaKnown RBP eCLIP10.55□□□□□ -0.72
LDB2-202ENST00000441778 ALDH1L1O75891 902 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 ADD1P35611 737 aaKnown RBP10.55□□□□□ -0.72
LDB2-202ENST00000441778 ELF2Q15723 593 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 STX1AQ16623 288 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 FBXO38Q6PIJ6 1188 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 DHX40Q8IX18 779 aaKnown RBP10.55□□□□□ -0.72
LDB2-202ENST00000441778 TRMT1Q9NXH9 659 aaKnown RBP10.55□□□□□ -0.72
LDB2-202ENST00000441778 FAM53CQ9NYF3 392 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 HMG20BQ9P0W2 317 aa10.55□□□□□ -0.72
LDB2-202ENST00000441778 NEMFO60524 1076 aa10.54□□□□□ -0.72
LDB2-202ENST00000441778 TAF5LO75529 589 aa10.54□□□□□ -0.72
LDB2-202ENST00000441778 FAM69CQ0P6D2 419 aa10.54□□□□□ -0.72
LDB2-202ENST00000441778 TERF2Q15554 542 aa10.54□□□□□ -0.72
LDB2-202ENST00000441778 FILIP1Q7Z7B0 1213 aa10.54□□□□□ -0.72
LDB2-202ENST00000441778 KRT222Q8N1A0 295 aa10.54□□□□□ -0.72
LDB2-202ENST00000441778 BICC1Q9H694 974 aaKnown RBP10.54□□□□□ -0.72
LDB2-202ENST00000441778 SLIT1O75093 1534 aa10.54□□□□□ -0.72
LDB2-202ENST00000441778 SNW1Q13573 536 aaKnown RBP10.53□□□□□ -0.72
LDB2-202ENST00000441778 CCAR1Q8IX12 1150 aaKnown RBP10.53□□□□□ -0.72
LDB2-202ENST00000441778 CCAR2Q8N163 923 aaKnown RBP10.53□□□□□ -0.72
LDB2-202ENST00000441778 SIL1Q9H173 461 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 MRC1P22897 1456 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 H3BQV1 296 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 FOSBP53539 338 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 IFFO2Q5TF58 517 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 USPL1Q5W0Q7 1092 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 KSR2Q6VAB6 950 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 Q6ZUG5 572 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 KLHDC4Q8TBB5 520 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 ST7Q9NRC1 585 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 DBF4Q9UBU7 674 aaPredicted RBP10.53□□□□□ -0.72
LDB2-202ENST00000441778 CFAP45Q9UL16 551 aa10.53□□□□□ -0.72
LDB2-202ENST00000441778 PRAMEF22A3QJZ6 481 aa10.52□□□□□ -0.72
LDB2-202ENST00000441778 BTBD11A6QL63 1104 aa10.52□□□□□ -0.72
LDB2-202ENST00000441778 CHGBP05060 677 aa10.52□□□□□ -0.72
LDB2-202ENST00000441778 SCRN1Q12765 414 aa10.52□□□□□ -0.72
LDB2-202ENST00000441778 G3BP1Q13283 466 aaKnown RBP eCLIP10.52□□□□□ -0.72
LDB2-202ENST00000441778 ERO1AQ96HE7 468 aa10.52□□□□□ -0.72
LDB2-202ENST00000441778 ZSCAN16Q9H4T2 348 aaPredicted RBP10.52□□□□□ -0.72
LDB2-202ENST00000441778 AMOTL2Q9Y2J4 779 aa10.52□□□□□ -0.72
LDB2-202ENST00000441778 GRM8O00222 908 aa10.52□□□□□ -0.73
LDB2-202ENST00000441778 HSP90B1P14625 803 aaKnown RBP10.52□□□□□ -0.73
LDB2-202ENST00000441778 TAF3Q5VWG9 929 aa10.52□□□□□ -0.73
LDB2-202ENST00000441778 NBPF6Q5VWK0 638 aa10.52□□□□□ -0.73
LDB2-202ENST00000441778 CCDC129Q6ZRS4 1044 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms