RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 ADAM21Q9UKJ8 722 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 CFAP45Q9UL16 551 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 NR1I2O75469 434 aa16.02■□□□□ 0.15
LINC02048-201ENST00000440556 BRD2P25440 801 aaKnown RBP16.02■□□□□ 0.15
LINC02048-201ENST00000440556 ARID5BQ14865 1188 aa16.02■□□□□ 0.15
LINC02048-201ENST00000440556 KRT24Q2M2I5 525 aa16.02■□□□□ 0.15
LINC02048-201ENST00000440556 FCHSD1Q86WN1 690 aa16.02■□□□□ 0.15
LINC02048-201ENST00000440556 CEP57L1Q8IYX8 460 aa16.02■□□□□ 0.15
LINC02048-201ENST00000440556 CHMP3Q9Y3E7 222 aa16.02■□□□□ 0.15
LINC02048-201ENST00000440556 LARGE1O95461 756 aa16.01■□□□□ 0.15
LINC02048-201ENST00000440556 HMOX1P09601 288 aa16.01■□□□□ 0.15
LINC02048-201ENST00000440556 TUBB4BP68371 445 aa16.01■□□□□ 0.15
LINC02048-201ENST00000440556 RASEFQ8IZ41 740 aa16.01■□□□□ 0.15
LINC02048-201ENST00000440556 LCMT1Q9UIC8 334 aa16.01■□□□□ 0.15
LINC02048-201ENST00000440556 USP16Q9Y5T5 823 aa16.01■□□□□ 0.15
LINC02048-201ENST00000440556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16■□□□□ 0.15
LINC02048-201ENST00000440556 LOC102724159A0A0B4J2E5 919 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 APPP05067 770 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 SFPQP23246 707 aaKnown RBP eCLIP16■□□□□ 0.15
LINC02048-201ENST00000440556 PSMA5P28066 241 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 PSME1Q06323 249 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 PWP2Q15269 919 aaKnown RBP16■□□□□ 0.15
LINC02048-201ENST00000440556 RPAINQ86UA6 219 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 HOMER1Q86YM7 354 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 UNC5CLQ8IV45 518 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 MPHOSPH8Q99549 860 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 FAM107BQ9H098 131 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 ZSCAN16Q9H4T2 348 aaPredicted RBP16■□□□□ 0.15
LINC02048-201ENST00000440556 CPP00450 1065 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 BRD3Q15059 726 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 TSHZ3Q63HK5 1081 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 SIRT1Q96EB6 747 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 BPIFA3Q9BQP9 254 aa16■□□□□ 0.15
LINC02048-201ENST00000440556 GOLGA6L9A6NEM1 432 aa15.99■□□□□ 0.15
LINC02048-201ENST00000440556 SMC2O95347 1197 aa15.99■□□□□ 0.15
LINC02048-201ENST00000440556 ZKSCAN1P17029 563 aaPredicted RBP15.99■□□□□ 0.15
LINC02048-201ENST00000440556 LMAN1P49257 510 aa15.99■□□□□ 0.15
LINC02048-201ENST00000440556 CDC37L1Q7L3B6 337 aa15.99■□□□□ 0.15
LINC02048-201ENST00000440556 DHX40Q8IX18 779 aaKnown RBP15.99■□□□□ 0.15
LINC02048-201ENST00000440556 RABGGTAQ92696 567 aa15.99■□□□□ 0.15
LINC02048-201ENST00000440556 JAKMIP1Q96N16 626 aaKnown RBP15.99■□□□□ 0.15
LINC02048-201ENST00000440556 CACNA1FO60840 1977 aa15.99■□□□□ 0.15
LINC02048-201ENST00000440556 DLC1Q96QB1 1528 aa15.99■□□□□ 0.15
LINC02048-201ENST00000440556 TMEM131LA2VDJ0 1609 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 ZSCAN12O43309 604 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 EVCP57679 992 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 ME3Q16798 604 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 ATL3Q6DD88 541 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 C11orf57Q6ZUT1 292 aaPredicted RBP15.98■□□□□ 0.15
LINC02048-201ENST00000440556 CEP89Q96ST8 783 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 ATP7BP35670 1465 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 MYH15Q9Y2K3 1946 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 POTEB2H3BUK9 544 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 EIF3JO75822 258 aaKnown RBP15.98■□□□□ 0.15
LINC02048-201ENST00000440556 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 ZRSR1Q15695 479 aaKnown RBP15.98■□□□□ 0.15
LINC02048-201ENST00000440556 HNRNPLLQ8WVV9 542 aaKnown RBP15.98■□□□□ 0.15
LINC02048-201ENST00000440556 PGBD1Q96JS3 809 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 FUT8Q9BYC5 575 aa15.98■□□□□ 0.15
LINC02048-201ENST00000440556 CCDC151A5D8V7 595 aa15.97■□□□□ 0.15
LINC02048-201ENST00000440556 KIF1CO43896 1103 aaKnown RBP15.97■□□□□ 0.15
LINC02048-201ENST00000440556 SASH3O75995 380 aa15.97■□□□□ 0.15
LINC02048-201ENST00000440556 CORO7P57737 925 aa15.97■□□□□ 0.15
LINC02048-201ENST00000440556 IL25Q9H293 177 aa15.97■□□□□ 0.15
LINC02048-201ENST00000440556 SOS1Q07889 1333 aaPredicted RBP15.97■□□□□ 0.15
LINC02048-201ENST00000440556 MAP2K7O14733 419 aa15.96■□□□□ 0.15
LINC02048-201ENST00000440556 GYS2P54840 703 aa15.96■□□□□ 0.15
LINC02048-201ENST00000440556 NBPF11Q86T75 865 aa15.96■□□□□ 0.15
LINC02048-201ENST00000440556 EFCAB13Q8IY85 973 aa15.96■□□□□ 0.15
LINC02048-201ENST00000440556 LRRN4CLQ8ND94 238 aa15.96■□□□□ 0.15
LINC02048-201ENST00000440556 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
LINC02048-201ENST00000440556 USP42Q9H9J4 1324 aaKnown RBP15.96■□□□□ 0.15
LINC02048-201ENST00000440556 URI1O94763 535 aaPredicted RBP15.95■□□□□ 0.14
LINC02048-201ENST00000440556 SEC31AO94979 1220 aaKnown RBP15.95■□□□□ 0.14
LINC02048-201ENST00000440556 CCDC172P0C7W6 258 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 GSCP56915 257 aaPredicted RBP15.95■□□□□ 0.14
LINC02048-201ENST00000440556 ST3GAL1Q11201 340 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 MCTP2Q6DN12 878 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 CCDC73Q6ZRK6 1079 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 RSRC2Q7L4I2 434 aaKnown RBP15.95■□□□□ 0.14
LINC02048-201ENST00000440556 PACS2Q86VP3 889 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 PI4K2BQ8TCG2 481 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 CARD6Q9BX69 1037 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 ZCCHC17Q9NP64 241 aaKnown RBP15.95■□□□□ 0.14
LINC02048-201ENST00000440556 TFIP11Q9UBB9 837 aaKnown RBP15.95■□□□□ 0.14
LINC02048-201ENST00000440556 CEP83Q9Y592 693 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 MYO5BQ9ULV0 1848 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 PXDNLA1KZ92 1463 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 EIF3CLB5ME19 914 aaKnown RBP15.95■□□□□ 0.14
LINC02048-201ENST00000440556 TRIM65Q6PJ69 517 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 MMS22LQ6ZRQ5 1243 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 FERMT3Q86UX7 667 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 ZBTB9Q96C00 473 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 EIF3CQ99613 913 aaKnown RBP15.95■□□□□ 0.14
LINC02048-201ENST00000440556 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
LINC02048-201ENST00000440556 XRN1Q8IZH2 1706 aaKnown RBP15.94■□□□□ 0.14
LINC02048-201ENST00000440556 KINO60870 393 aaKnown RBP15.94■□□□□ 0.14
LINC02048-201ENST00000440556 MAP3K9P80192 1104 aa15.94■□□□□ 0.14
LINC02048-201ENST00000440556 ARMCX5Q6P1M9 558 aa15.94■□□□□ 0.14
LINC02048-201ENST00000440556 GOLGA1Q92805 767 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms