RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 K7ELQ4 463 aaPredicted RBP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 ONECUT3O60422 494 aaPredicted RBP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 TLR7Q9NYK1 1049 aaKnown RBP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 CIZ1Q9ULV3 898 aaPredicted RBP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 NUTM2BA6NNL0 878 aaPredicted RBP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 NUTM2EB1AL46 878 aaPredicted RBP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 HSPA4P34932 840 aa15.99■□□□□ 0.15
ACTN4-204ENST00000440400 NUTM2AQ8IVF1 878 aaPredicted RBP15.99■□□□□ 0.15
ACTN4-204ENST00000440400 KLHDC4Q8TBB5 520 aa15.99■□□□□ 0.15
ACTN4-204ENST00000440400 CERKQ8TCT0 537 aa15.99■□□□□ 0.15
ACTN4-204ENST00000440400 MED23Q9ULK4 1368 aa15.99■□□□□ 0.15
ACTN4-204ENST00000440400 C4AP0C0L4 1744 aa15.98■□□□□ 0.15
ACTN4-204ENST00000440400 C4BP0C0L5 1744 aa15.98■□□□□ 0.15
ACTN4-204ENST00000440400 TRIM6-TRIM34B2RNG4 842 aa15.98■□□□□ 0.15
ACTN4-204ENST00000440400 HLFQ16534 295 aa15.98■□□□□ 0.15
ACTN4-204ENST00000440400 CCDC87Q9NVE4 849 aa15.98■□□□□ 0.15
ACTN4-204ENST00000440400 RTL9Q8NET4 1388 aa15.98■□□□□ 0.15
ACTN4-204ENST00000440400 IL15P40933 162 aaPredicted RBP15.98■□□□□ 0.15
ACTN4-204ENST00000440400 TFCP2Q12800 502 aa15.98■□□□□ 0.15
ACTN4-204ENST00000440400 RILPL2Q969X0 211 aa15.98■□□□□ 0.15
ACTN4-204ENST00000440400 DBNLQ9UJU6 430 aaKnown RBP15.98■□□□□ 0.15
ACTN4-204ENST00000440400 LOC102724428A0A0B4J2F2 783 aa15.97■□□□□ 0.15
ACTN4-204ENST00000440400 HIP1O00291 1037 aa15.97■□□□□ 0.15
ACTN4-204ENST00000440400 SIK1P57059 783 aa15.97■□□□□ 0.15
ACTN4-204ENST00000440400 ITPK1Q13572 414 aa15.97■□□□□ 0.15
ACTN4-204ENST00000440400 FGD1P98174 961 aa15.97■□□□□ 0.15
ACTN4-204ENST00000440400 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
ACTN4-204ENST00000440400 EYA2O00167 538 aa15.97■□□□□ 0.15
ACTN4-204ENST00000440400 UBN2Q6ZU65 1347 aa15.96■□□□□ 0.15
ACTN4-204ENST00000440400 GOLGA6L3A6NEY3 463 aa15.96■□□□□ 0.15
ACTN4-204ENST00000440400 JARID2Q92833 1246 aaPredicted RBP15.96■□□□□ 0.15
ACTN4-204ENST00000440400 ARID3AQ99856 593 aa15.96■□□□□ 0.15
ACTN4-204ENST00000440400 DOCK2Q92608 1830 aa15.96■□□□□ 0.14
ACTN4-204ENST00000440400 CAMTA2O94983 1202 aa15.95■□□□□ 0.14
ACTN4-204ENST00000440400 CRKLP46109 303 aaKnown RBP15.95■□□□□ 0.14
ACTN4-204ENST00000440400 HAUS7Q99871 368 aa15.95■□□□□ 0.14
ACTN4-204ENST00000440400 MYH7P12883 1935 aa15.95■□□□□ 0.14
ACTN4-204ENST00000440400 CHMP5Q9NZZ3 219 aa15.95■□□□□ 0.14
ACTN4-204ENST00000440400 SIL1Q9H173 461 aa15.95■□□□□ 0.14
ACTN4-204ENST00000440400 PRDM4Q9UKN5 801 aa15.95■□□□□ 0.14
ACTN4-204ENST00000440400 AKAP11Q9UKA4 1901 aa15.94■□□□□ 0.14
ACTN4-204ENST00000440400 MCCP23508 829 aa15.94■□□□□ 0.14
ACTN4-204ENST00000440400 DZIP3Q86Y13 1208 aaKnown RBP15.94■□□□□ 0.14
ACTN4-204ENST00000440400 CLEC17AQ6ZS10 378 aa15.93■□□□□ 0.14
ACTN4-204ENST00000440400 RUFY2Q8WXA3 655 aa15.93■□□□□ 0.14
ACTN4-204ENST00000440400 CCDC8Q9H0W5 538 aaPredicted RBP15.93■□□□□ 0.14
ACTN4-204ENST00000440400 MCM2P49736 904 aa15.93■□□□□ 0.14
ACTN4-204ENST00000440400 RC3H1Q5TC82 1133 aaKnown RBP15.93■□□□□ 0.14
ACTN4-204ENST00000440400 SPRYD3Q8NCJ5 442 aa15.93■□□□□ 0.14
ACTN4-204ENST00000440400 PALD1Q9ULE6 856 aa15.93■□□□□ 0.14
ACTN4-204ENST00000440400 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
ACTN4-204ENST00000440400 CTSWP56202 376 aa15.92■□□□□ 0.14
ACTN4-204ENST00000440400 FAM98CQ17RN3 349 aaKnown RBP15.92■□□□□ 0.14
ACTN4-204ENST00000440400 TTLL11Q8NHH1 800 aa15.92■□□□□ 0.14
ACTN4-204ENST00000440400 C8orf37Q96NL8 207 aa15.92■□□□□ 0.14
ACTN4-204ENST00000440400 NGLY1Q96IV0 654 aa15.92■□□□□ 0.14
ACTN4-204ENST00000440400 VGLL2Q8N8G2 317 aa15.91■□□□□ 0.14
ACTN4-204ENST00000440400 ZNF512BQ96KM6 892 aaPredicted RBP15.91■□□□□ 0.14
ACTN4-204ENST00000440400 USP21Q9UK80 565 aa15.91■□□□□ 0.14
ACTN4-204ENST00000440400 MAP4K4O95819 1239 aaPredicted RBP15.91■□□□□ 0.14
ACTN4-204ENST00000440400 PARP10Q53GL7 1025 aa15.91■□□□□ 0.14
ACTN4-204ENST00000440400 RIPOR2Q9Y4F9 1068 aa15.91■□□□□ 0.14
ACTN4-204ENST00000440400 BRWD3Q6RI45 1802 aa15.91■□□□□ 0.14
ACTN4-204ENST00000440400 ST18O60284 1047 aa15.91■□□□□ 0.14
ACTN4-204ENST00000440400 PDE8AO60658 829 aa15.91■□□□□ 0.14
ACTN4-204ENST00000440400 ACSBG1Q96GR2 724 aa15.91■□□□□ 0.14
ACTN4-204ENST00000440400 PDCL3Q9H2J4 239 aa15.91■□□□□ 0.14
ACTN4-204ENST00000440400 CUL4AQ13619 759 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 LRRC24Q50LG9 513 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 CLEC4GQ6UXB4 293 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 SYTL4Q96C24 671 aaPredicted RBP15.9■□□□□ 0.14
ACTN4-204ENST00000440400 DBNDD2Q9BQY9 259 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 RPAP1Q9BWH6 1393 aaPredicted RBP15.9■□□□□ 0.14
ACTN4-204ENST00000440400 KCNQ2O43526 872 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 RAB3GAP1Q15042 981 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 LINC00116Q8NCU8 138 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 FAM89AQ96GI7 184 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 ANO2Q9NQ90 1003 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 SH3TC1Q8TE82 1336 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 UBR3Q6ZT12 1888 aa15.9■□□□□ 0.14
ACTN4-204ENST00000440400 NECTIN1Q15223 517 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 USPL1Q5W0Q7 1092 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 TM6SF1Q9BZW5 370 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 ESPNB1AK53 854 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 TSGA10IPQ3SY00 556 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 MAP4K1Q92918 833 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 TTC14Q96N46 770 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 DIAPH3Q9NSV4 1193 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 SNX14Q9Y5W7 946 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 CCDC171Q6TFL3 1326 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 COL4A1P02462 1669 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 NTSR2O95665 410 aa15.89■□□□□ 0.13
ACTN4-204ENST00000440400 CYP2E1P05181 493 aaPredicted RBP15.89■□□□□ 0.13
ACTN4-204ENST00000440400 CCDC57Q2TAC2 916 aa15.88■□□□□ 0.13
ACTN4-204ENST00000440400 GJD4Q96KN9 370 aaPredicted RBP15.88■□□□□ 0.13
ACTN4-204ENST00000440400 NMIQ13287 307 aaPredicted RBP15.88■□□□□ 0.13
ACTN4-204ENST00000440400 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
ACTN4-204ENST00000440400 AKAP2Q9Y2D5 859 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms