RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 ZNF34Q8IZ26 560 aa21.01■□□□□ 0.95
TVP23C-204ENST00000438826 NEUROD6Q96NK8 337 aa21.01■□□□□ 0.95
TVP23C-204ENST00000438826 ANKRD36CQ5JPF3 1778 aa21.01■□□□□ 0.95
TVP23C-204ENST00000438826 CICQ96RK0 1608 aaPredicted RBP21.01■□□□□ 0.95
TVP23C-204ENST00000438826 TAF7LQ5H9L4 462 aa21.01■□□□□ 0.95
TVP23C-204ENST00000438826 SYNE4Q8N205 404 aa21.01■□□□□ 0.95
TVP23C-204ENST00000438826 HAUS7Q99871 368 aa21.01■□□□□ 0.95
TVP23C-204ENST00000438826 PUS3Q9BZE2 481 aaKnown RBP21.01■□□□□ 0.95
TVP23C-204ENST00000438826 SNRKQ9NRH2 765 aa21.01■□□□□ 0.95
TVP23C-204ENST00000438826 IRS4O14654 1257 aaPredicted RBP21■□□□□ 0.95
TVP23C-204ENST00000438826 NMIQ13287 307 aaPredicted RBP21■□□□□ 0.95
TVP23C-204ENST00000438826 FAM227BQ96M60 508 aa21■□□□□ 0.95
TVP23C-204ENST00000438826 CEP126Q9P2H0 1117 aa21■□□□□ 0.95
TVP23C-204ENST00000438826 NUP98P52948 1817 aa21■□□□□ 0.95
TVP23C-204ENST00000438826 TIMM10P62072 90 aa20.99■□□□□ 0.95
TVP23C-204ENST00000438826 TTLL11Q8NHH1 800 aa20.99■□□□□ 0.95
TVP23C-204ENST00000438826 CCDC85AQ96PX6 553 aaPredicted RBP20.99■□□□□ 0.95
TVP23C-204ENST00000438826 CTSWP56202 376 aa20.98■□□□□ 0.95
TVP23C-204ENST00000438826 UBN2Q6ZU65 1347 aa20.98■□□□□ 0.95
TVP23C-204ENST00000438826 ZNF609O15014 1411 aa20.98■□□□□ 0.95
TVP23C-204ENST00000438826 RREB1Q92766 1687 aa20.98■□□□□ 0.95
TVP23C-204ENST00000438826 SNX14Q9Y5W7 946 aa20.98■□□□□ 0.95
TVP23C-204ENST00000438826 RFX7Q2KHR2 1363 aa20.97■□□□□ 0.95
TVP23C-204ENST00000438826 A0A1B0GUL7 405 aa20.97■□□□□ 0.95
TVP23C-204ENST00000438826 PDE8AO60658 829 aa20.97■□□□□ 0.95
TVP23C-204ENST00000438826 PTH1RQ03431 593 aa20.97■□□□□ 0.95
TVP23C-204ENST00000438826 CERKQ8TCT0 537 aa20.97■□□□□ 0.95
TVP23C-204ENST00000438826 EDC3Q96F86 508 aaKnown RBP20.97■□□□□ 0.95
TVP23C-204ENST00000438826 DNAJC2Q99543 621 aaKnown RBP20.97■□□□□ 0.95
TVP23C-204ENST00000438826 AKAP2Q9Y2D5 859 aa20.97■□□□□ 0.95
TVP23C-204ENST00000438826 CCDC171Q6TFL3 1326 aa20.97■□□□□ 0.95
TVP23C-204ENST00000438826 ITGA6P23229 1130 aa20.96■□□□□ 0.95
TVP23C-204ENST00000438826 RAB3GAP1Q15042 981 aa20.96■□□□□ 0.95
TVP23C-204ENST00000438826 AK7Q96M32 723 aa20.96■□□□□ 0.95
TVP23C-204ENST00000438826 CWC22Q9HCG8 908 aaKnown RBP20.96■□□□□ 0.95
TVP23C-204ENST00000438826 A0A0D9SFI3 127 aa20.96■□□□□ 0.95
TVP23C-204ENST00000438826 ANKRD18BA2A2Z9 1011 aa20.96■□□□□ 0.95
TVP23C-204ENST00000438826 CAMTA2O94983 1202 aa20.96■□□□□ 0.95
TVP23C-204ENST00000438826 UPF3BQ9BZI7 483 aaKnown RBP20.96■□□□□ 0.95
TVP23C-204ENST00000438826 GREM2Q9H772 168 aa20.96■□□□□ 0.95
TVP23C-204ENST00000438826 MCM4P33991 863 aa20.95■□□□□ 0.94
TVP23C-204ENST00000438826 RASEFQ8IZ41 740 aa20.95■□□□□ 0.94
TVP23C-204ENST00000438826 TMX3Q96JJ7 454 aa20.95■□□□□ 0.94
TVP23C-204ENST00000438826 PARP10Q53GL7 1025 aa20.94■□□□□ 0.94
TVP23C-204ENST00000438826 MAP4K1Q92918 833 aa20.94■□□□□ 0.94
TVP23C-204ENST00000438826 KCNB2Q92953 911 aa20.94■□□□□ 0.94
TVP23C-204ENST00000438826 MED23Q9ULK4 1368 aa20.94■□□□□ 0.94
TVP23C-204ENST00000438826 ZNF831Q5JPB2 1677 aa20.94■□□□□ 0.94
TVP23C-204ENST00000438826 DEKP35659 375 aaKnown RBP20.94■□□□□ 0.94
TVP23C-204ENST00000438826 SUSD4Q5VX71 490 aa20.94■□□□□ 0.94
TVP23C-204ENST00000438826 TICAM2Q86XR7 235 aa20.94■□□□□ 0.94
TVP23C-204ENST00000438826 TNPO1Q92973 898 aaKnown RBP20.94■□□□□ 0.94
TVP23C-204ENST00000438826 NDUFB9Q9Y6M9 179 aa20.94■□□□□ 0.94
TVP23C-204ENST00000438826 SH3TC1Q8TE82 1336 aa20.93■□□□□ 0.94
TVP23C-204ENST00000438826 MYH14Q7Z406 1995 aaKnown RBP20.93■□□□□ 0.94
TVP23C-204ENST00000438826 NECTIN1Q15223 517 aa20.93■□□□□ 0.94
TVP23C-204ENST00000438826 MEX3CQ5U5Q3 659 aaKnown RBP20.93■□□□□ 0.94
TVP23C-204ENST00000438826 PRPF40BQ6NWY9 871 aaKnown RBP20.93■□□□□ 0.94
TVP23C-204ENST00000438826 LDHAL6AQ6ZMR3 332 aa20.93■□□□□ 0.94
TVP23C-204ENST00000438826 KBTBD3Q8NAB2 608 aa20.93■□□□□ 0.94
TVP23C-204ENST00000438826 UTP14AQ9BVJ6 771 aaKnown RBP20.93■□□□□ 0.94
TVP23C-204ENST00000438826 RIPOR2Q9Y4F9 1068 aa20.93■□□□□ 0.94
TVP23C-204ENST00000438826 DDX46Q7L014 1031 aaKnown RBP20.92■□□□□ 0.94
TVP23C-204ENST00000438826 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.92■□□□□ 0.94
TVP23C-204ENST00000438826 PAG1Q9NWQ8 432 aa20.92■□□□□ 0.94
TVP23C-204ENST00000438826 IFIT1P09914 478 aaKnown RBP20.92■□□□□ 0.94
TVP23C-204ENST00000438826 ZKSCAN1P17029 563 aaPredicted RBP20.92■□□□□ 0.94
TVP23C-204ENST00000438826 KCNJ4P48050 445 aa20.92■□□□□ 0.94
TVP23C-204ENST00000438826 RBM8AQ9Y5S9 174 aaKnown RBP20.92■□□□□ 0.94
TVP23C-204ENST00000438826 MYH3P11055 1940 aa20.91■□□□□ 0.94
TVP23C-204ENST00000438826 METTL24Q5JXM2 366 aa20.91■□□□□ 0.94
TVP23C-204ENST00000438826 CCDC158Q5M9N0 1113 aa20.91■□□□□ 0.94
TVP23C-204ENST00000438826 LINC00116Q8NCU8 138 aa20.91■□□□□ 0.94
TVP23C-204ENST00000438826 CNNM1Q9NRU3 951 aa20.91■□□□□ 0.94
TVP23C-204ENST00000438826 ZNF652Q9Y2D9 606 aa20.91■□□□□ 0.94
TVP23C-204ENST00000438826 THSD7AQ9UPZ6 1657 aa20.91■□□□□ 0.94
TVP23C-204ENST00000438826 COL5A3P25940 1745 aaPredicted RBP20.9■□□□□ 0.94
TVP23C-204ENST00000438826 GOLIM4O00461 696 aa20.9■□□□□ 0.94
TVP23C-204ENST00000438826 NUCB2P80303 420 aa20.9■□□□□ 0.94
TVP23C-204ENST00000438826 CUL4AQ13619 759 aa20.9■□□□□ 0.94
TVP23C-204ENST00000438826 GORABQ5T7V8 394 aa20.9■□□□□ 0.94
TVP23C-204ENST00000438826 ZGPATQ8N5A5 531 aaKnown RBP20.9■□□□□ 0.94
TVP23C-204ENST00000438826 XAGE2Q96GT9 111 aa20.9■□□□□ 0.94
TVP23C-204ENST00000438826 GBP4Q96PP9 640 aa20.9■□□□□ 0.94
TVP23C-204ENST00000438826 CREB3L3Q68CJ9 461 aa20.9■□□□□ 0.94
TVP23C-204ENST00000438826 ZNF589Q86UQ0 364 aaPredicted RBP20.9■□□□□ 0.94
TVP23C-204ENST00000438826 GJD4Q96KN9 370 aaPredicted RBP20.9■□□□□ 0.94
TVP23C-204ENST00000438826 TM6SF1Q9BZW5 370 aa20.9■□□□□ 0.94
TVP23C-204ENST00000438826 NIP7Q9Y221 180 aaKnown RBP eCLIP20.9■□□□□ 0.94
TVP23C-204ENST00000438826 HSP90B1P14625 803 aaKnown RBP20.89■□□□□ 0.93
TVP23C-204ENST00000438826 HSPA1LP34931 641 aa20.89■□□□□ 0.93
TVP23C-204ENST00000438826 MCMDC2Q4G0Z9 681 aa20.89■□□□□ 0.93
TVP23C-204ENST00000438826 CLEC4GQ6UXB4 293 aa20.89■□□□□ 0.93
TVP23C-204ENST00000438826 TTC14Q96N46 770 aa20.89■□□□□ 0.93
TVP23C-204ENST00000438826 RIC1Q4ADV7 1423 aa20.89■□□□□ 0.93
TVP23C-204ENST00000438826 CNTNAP4Q9C0A0 1308 aa20.89■□□□□ 0.93
TVP23C-204ENST00000438826 DDX11L8A8MPP1 907 aa20.88■□□□□ 0.93
TVP23C-204ENST00000438826 TAF5LO75529 589 aa20.88■□□□□ 0.93
TVP23C-204ENST00000438826 HCLS1P14317 486 aaPredicted RBP20.88■□□□□ 0.93
TVP23C-204ENST00000438826 CASTP20810 708 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms