RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 SUCLG2Q96I99 432 aa13.23□□□□□ -0.29
HLA-DMB-259ENST00000438510 CD2APQ9Y5K6 639 aa13.23□□□□□ -0.29
HLA-DMB-259ENST00000438510 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
HLA-DMB-259ENST00000438510 TAF1P21675 1872 aa13.23□□□□□ -0.29
HLA-DMB-259ENST00000438510 CCDC152Q4G0S7 254 aa13.22□□□□□ -0.29
HLA-DMB-259ENST00000438510 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
HLA-DMB-259ENST00000438510 RPGRQ92834 1020 aaKnown RBP13.22□□□□□ -0.29
HLA-DMB-259ENST00000438510 BICC1Q9H694 974 aaKnown RBP13.22□□□□□ -0.29
HLA-DMB-259ENST00000438510 RTL9Q8NET4 1388 aa13.21□□□□□ -0.29
HLA-DMB-259ENST00000438510 ARFGEF1Q9Y6D6 1849 aa13.21□□□□□ -0.29
HLA-DMB-259ENST00000438510 KLRG2A4D1S0 409 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMB-259ENST00000438510 H0YIN7 160 aa13.21□□□□□ -0.29
HLA-DMB-259ENST00000438510 TGFB2P61812 414 aa13.21□□□□□ -0.29
HLA-DMB-259ENST00000438510 SF3B3Q15393 1217 aaKnown RBP13.21□□□□□ -0.29
HLA-DMB-259ENST00000438510 CRY2Q49AN0 593 aa13.21□□□□□ -0.29
HLA-DMB-259ENST00000438510 ZBTB40Q9NUA8 1239 aa13.21□□□□□ -0.29
HLA-DMB-259ENST00000438510 A0A1B0GUL6 1792 aa13.2□□□□□ -0.3
HLA-DMB-259ENST00000438510 LRRC37AA6NMS7 1700 aa13.2□□□□□ -0.3
HLA-DMB-259ENST00000438510 IRX6P78412 446 aaPredicted RBP13.2□□□□□ -0.3
HLA-DMB-259ENST00000438510 FOXO4P98177 505 aa13.2□□□□□ -0.3
HLA-DMB-259ENST00000438510 RABL6Q3YEC7 729 aaPredicted RBP13.2□□□□□ -0.3
HLA-DMB-259ENST00000438510 C2CD5Q86YS7 1000 aa13.2□□□□□ -0.3
HLA-DMB-259ENST00000438510 TTLL11Q8NHH1 800 aa13.2□□□□□ -0.3
HLA-DMB-259ENST00000438510 KAZALD1Q96I82 304 aa13.2□□□□□ -0.3
HLA-DMB-259ENST00000438510 CHMP3Q9Y3E7 222 aa13.2□□□□□ -0.3
HLA-DMB-259ENST00000438510 CSF1RP07333 972 aa13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 SRGNP10124 158 aa13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 NPR1P16066 1061 aa13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 EPHA10Q5JZY3 1008 aa13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 DDX46Q7L014 1031 aaKnown RBP13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 ANKRD44Q8N8A2 993 aa13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 MASTLQ96GX5 879 aa13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 C1orf115Q9H7X2 142 aa13.19□□□□□ -0.3
HLA-DMB-259ENST00000438510 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 IFIT5Q13325 482 aaKnown RBP13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 MTX1Q13505 466 aa13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 CCDC57Q2TAC2 916 aa13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 FAM161AQ3B820 660 aa13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 STYK1Q6J9G0 422 aa13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 EXOC6Q8TAG9 804 aa13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 CDC5LQ99459 802 aaKnown RBP13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 FHDC1Q9C0D6 1143 aaPredicted RBP13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 SLX4Q8IY92 1834 aa13.18□□□□□ -0.3
HLA-DMB-259ENST00000438510 ANKRD18BA2A2Z9 1011 aa13.17□□□□□ -0.3
HLA-DMB-259ENST00000438510 ITGA6P23229 1130 aa13.17□□□□□ -0.3
HLA-DMB-259ENST00000438510 CHRNA5P30532 468 aa13.17□□□□□ -0.3
HLA-DMB-259ENST00000438510 RPAP2Q8IXW5 612 aaPredicted RBP13.17□□□□□ -0.3
HLA-DMB-259ENST00000438510 CNKSR1Q969H4 720 aa13.17□□□□□ -0.3
HLA-DMB-259ENST00000438510 CCDC85AQ96PX6 553 aaPredicted RBP13.17□□□□□ -0.3
HLA-DMB-259ENST00000438510 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
HLA-DMB-259ENST00000438510 GREM2Q9H772 168 aa13.17□□□□□ -0.3
HLA-DMB-259ENST00000438510 SRGAP3O43295 1099 aa13.16□□□□□ -0.3
HLA-DMB-259ENST00000438510 HMMRO75330 724 aa13.16□□□□□ -0.3
HLA-DMB-259ENST00000438510 DPEP1P16444 411 aa13.16□□□□□ -0.3
HLA-DMB-259ENST00000438510 GRAPQ13588 217 aa13.16□□□□□ -0.3
HLA-DMB-259ENST00000438510 TAF7LQ5H9L4 462 aa13.16□□□□□ -0.3
HLA-DMB-259ENST00000438510 CEP85Q6P2H3 762 aa13.16□□□□□ -0.3
HLA-DMB-259ENST00000438510 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
HLA-DMB-259ENST00000438510 ZNF622Q969S3 477 aaKnown RBP eCLIP13.16□□□□□ -0.3
HLA-DMB-259ENST00000438510 COL4A1P02462 1669 aa13.15□□□□□ -0.3
HLA-DMB-259ENST00000438510 A0A0G2JLW4 131 aa13.15□□□□□ -0.3
HLA-DMB-259ENST00000438510 IGHMBP2P38935 993 aaKnown RBP13.15□□□□□ -0.3
HLA-DMB-259ENST00000438510 TMC4Q7Z404 712 aa13.15□□□□□ -0.3
HLA-DMB-259ENST00000438510 ANKRD18AQ8IVF6 992 aa13.15□□□□□ -0.3
HLA-DMB-259ENST00000438510 SYT17Q9BSW7 474 aa13.15□□□□□ -0.3
HLA-DMB-259ENST00000438510 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
HLA-DMB-259ENST00000438510 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
HLA-DMB-259ENST00000438510 TTLL6Q8N841 843 aa13.14□□□□□ -0.31
HLA-DMB-259ENST00000438510 NLGN2Q8NFZ4 835 aa13.14□□□□□ -0.31
HLA-DMB-259ENST00000438510 SSH3Q8TE77 659 aa13.14□□□□□ -0.31
HLA-DMB-259ENST00000438510 MPHOSPH8Q99549 860 aa13.14□□□□□ -0.31
HLA-DMB-259ENST00000438510 SEC31BQ9NQW1 1179 aa13.14□□□□□ -0.31
HLA-DMB-259ENST00000438510 FER1L6Q2WGJ9 1857 aa13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 PNMA6EA0A0J9YXQ4 647 aa13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 PPEF1O14829 653 aaPredicted RBP13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 BBOX1O75936 387 aa13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 KCNA3P22001 575 aa13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 RPS8P62241 208 aaKnown RBP13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 ERICH6BQ5W0A0 696 aa13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 PRPF40BQ6NWY9 871 aaKnown RBP13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 CELF1Q92879 486 aaKnown RBP13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 TMX4Q9H1E5 349 aaPredicted RBP13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 FBXO3Q9UK99 471 aa13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
HLA-DMB-259ENST00000438510 RFX5P48382 616 aaPredicted RBP13.12□□□□□ -0.31
HLA-DMB-259ENST00000438510 POLA2Q14181 598 aa13.12□□□□□ -0.31
HLA-DMB-259ENST00000438510 DALRD3Q5D0E6 543 aaKnown RBP13.12□□□□□ -0.31
HLA-DMB-259ENST00000438510 COPRSQ9NQ92 184 aa13.12□□□□□ -0.31
HLA-DMB-259ENST00000438510 ARAP2Q8WZ64 1704 aa13.11□□□□□ -0.31
HLA-DMB-259ENST00000438510 PTPN12Q05209 780 aaKnown RBP13.11□□□□□ -0.31
HLA-DMB-259ENST00000438510 SOGA3Q5TF21 947 aa13.11□□□□□ -0.31
HLA-DMB-259ENST00000438510 LDHAL6AQ6ZMR3 332 aa13.11□□□□□ -0.31
HLA-DMB-259ENST00000438510 CNNM1Q9NRU3 951 aa13.11□□□□□ -0.31
HLA-DMB-259ENST00000438510 BSDC1Q9NW68 430 aaPredicted RBP13.11□□□□□ -0.31
HLA-DMB-259ENST00000438510 PCDHB15Q9Y5E8 787 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms