RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 GBP5Q96PP8 586 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 LARSQ9P2J5 1176 aaKnown RBP13.11□□□□□ -0.31
PTCH1-209ENST00000437951 EFCAB5A4FU69 1503 aa13.11□□□□□ -0.31
PTCH1-209ENST00000437951 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
PTCH1-209ENST00000437951 CCDC26Q8TAB7 109 aa13.1□□□□□ -0.31
PTCH1-209ENST00000437951 PLCB1Q9NQ66 1216 aa13.1□□□□□ -0.31
PTCH1-209ENST00000437951 DNAJC8O75937 253 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-209ENST00000437951 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
PTCH1-209ENST00000437951 EXOC1Q9NV70 894 aa13.1□□□□□ -0.31
PTCH1-209ENST00000437951 SLC12A7Q9Y666 1083 aa13.1□□□□□ -0.31
PTCH1-209ENST00000437951 CCDC62Q6P9F0 684 aa13.1□□□□□ -0.31
PTCH1-209ENST00000437951 AFAP1L2Q8N4X5 818 aa13.1□□□□□ -0.31
PTCH1-209ENST00000437951 BANK1Q8NDB2 785 aa13.1□□□□□ -0.31
PTCH1-209ENST00000437951 ABCC11Q96J66 1382 aa13.1□□□□□ -0.31
PTCH1-209ENST00000437951 SRGAP3O43295 1099 aa13.09□□□□□ -0.31
PTCH1-209ENST00000437951 SYT1P21579 422 aa13.09□□□□□ -0.31
PTCH1-209ENST00000437951 CUL5Q93034 780 aa13.09□□□□□ -0.31
PTCH1-209ENST00000437951 CDCA7LQ96GN5 454 aa13.09□□□□□ -0.31
PTCH1-209ENST00000437951 HVCN1Q96D96 273 aa13.09□□□□□ -0.31
PTCH1-209ENST00000437951 Q9H521 79 aa13.09□□□□□ -0.31
PTCH1-209ENST00000437951 CCDC194A0A1B0GVG4 234 aa13.09□□□□□ -0.31
PTCH1-209ENST00000437951 FKBP4Q02790 459 aaKnown RBP eCLIP13.09□□□□□ -0.31
PTCH1-209ENST00000437951 DRC1Q96MC2 740 aa13.09□□□□□ -0.31
PTCH1-209ENST00000437951 RUFY4Q6ZNE9 571 aa13.09□□□□□ -0.31
PTCH1-209ENST00000437951 BCAR3O75815 825 aa13.09□□□□□ -0.31
PTCH1-209ENST00000437951 SPATS2LQ9NUQ6 558 aaKnown RBP13.09□□□□□ -0.31
PTCH1-209ENST00000437951 CCDC63Q8NA47 563 aa13.08□□□□□ -0.31
PTCH1-209ENST00000437951 FGD6Q6ZV73 1430 aa13.08□□□□□ -0.32
PTCH1-209ENST00000437951 MPHOSPH8Q99549 860 aa13.08□□□□□ -0.32
PTCH1-209ENST00000437951 CSRNP2Q9H175 543 aa13.08□□□□□ -0.32
PTCH1-209ENST00000437951 NDUFAB1O14561 156 aa13.08□□□□□ -0.32
PTCH1-209ENST00000437951 CEP126Q9P2H0 1117 aa13.08□□□□□ -0.32
PTCH1-209ENST00000437951 IQCA1Q86XH1 822 aa13.08□□□□□ -0.32
PTCH1-209ENST00000437951 TMX1Q9H3N1 280 aa13.08□□□□□ -0.32
PTCH1-209ENST00000437951 GPRASP1Q5JY77 1395 aa13.08□□□□□ -0.32
PTCH1-209ENST00000437951 GJB2P29033 226 aa13.08□□□□□ -0.32
PTCH1-209ENST00000437951 ANO6Q4KMQ2 910 aa13.08□□□□□ -0.32
PTCH1-209ENST00000437951 VPS52Q8N1B4 723 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 TXNDC16Q9P2K2 825 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 HFM1A2PYH4 1435 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 PRKAR2BP31323 418 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 BMP2KLQ5H9B9 411 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 ZSWIM4Q9H7M6 989 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 ZSCAN22P10073 491 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-209ENST00000437951 GCKP35557 465 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 HSP90AA5PQ58FG0 334 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 CATIPQ7Z7H3 387 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 PPP1R9BQ96SB3 815 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 BICDL2A1A5D9 508 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 TRIM14Q14142 442 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 CCDC144CPQ8IYA2 1237 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 GOLGA6CA6NDK9 693 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 GOLGA6DP0CG33 693 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 SYKP43405 635 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 PRR16Q569H4 304 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 ANKRD24Q8TF21 1146 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 TRIM47Q96LD4 638 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 GOLGA6AQ9NYA3 693 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 KRT13P13646 458 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 CNGA4Q8IV77 575 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 MCUR1Q96AQ8 359 aa13.07□□□□□ -0.32
PTCH1-209ENST00000437951 DDX27Q96GQ7 796 aaKnown RBP13.06□□□□□ -0.32
PTCH1-209ENST00000437951 TBC1D32Q96NH3 1257 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 MYO1BO43795 1136 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 ZNF622Q969S3 477 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTCH1-209ENST00000437951 RLBP1P12271 317 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 XRCC6P12956 609 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTCH1-209ENST00000437951 NLRP5P59047 1200 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 FERMT3Q86UX7 667 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 GSTA5Q7RTV2 222 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 EIF2AQ9BY44 585 aaKnown RBP13.06□□□□□ -0.32
PTCH1-209ENST00000437951 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 CALCOCO2Q13137 446 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 PRPF40BQ6NWY9 871 aaKnown RBP13.06□□□□□ -0.32
PTCH1-209ENST00000437951 RPAINQ86UA6 219 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 ZNF526Q8TF50 670 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-209ENST00000437951 GKAP1Q5VSY0 366 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-209ENST00000437951 UBA5Q9GZZ9 404 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTCH1-209ENST00000437951 HCLS1P14317 486 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-209ENST00000437951 SNX16P57768 344 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 PPP1R12CQ9BZL4 782 aa13.06□□□□□ -0.32
PTCH1-209ENST00000437951 PLCD3Q8N3E9 789 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 SNX21Q969T3 373 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 NLRP2Q9NX02 1062 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 ACTN4O43707 911 aaKnown RBP13.05□□□□□ -0.32
PTCH1-209ENST00000437951 PHLDB3Q6NSJ2 640 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 BICD1Q96G01 975 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 IFT20Q8IY31 132 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 GABPB2Q8TAK5 448 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-209ENST00000437951 MTMR3Q13615 1198 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 ATL3Q6DD88 541 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 EPSTI1Q96J88 318 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 SIL1Q9H173 461 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 TTC36A6NLP5 189 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 MSANTD4Q8NCY6 345 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 MYRIPQ8NFW9 859 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 TRIM4Q9C037 500 aa13.05□□□□□ -0.32
PTCH1-209ENST00000437951 PSMA7O14818 248 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms