RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 NEFMP07197 916 aa18.61■□□□□ 0.57
LINC01088-201ENST00000437737 HIRAP54198 1017 aaPredicted RBP18.61■□□□□ 0.57
LINC01088-201ENST00000437737 HUNKP57058 714 aa18.61■□□□□ 0.57
LINC01088-201ENST00000437737 MPNDQ8N594 471 aa18.61■□□□□ 0.57
LINC01088-201ENST00000437737 TRPM4Q8TD43 1214 aa18.61■□□□□ 0.57
LINC01088-201ENST00000437737 RTFDC1Q9BY42 306 aaPredicted RBP18.61■□□□□ 0.57
LINC01088-201ENST00000437737 EIF4A1P60842 406 aaKnown RBP18.6■□□□□ 0.57
LINC01088-201ENST00000437737 ZIC5Q96T25 663 aa18.6■□□□□ 0.57
LINC01088-201ENST00000437737 UTP14AQ9BVJ6 771 aaKnown RBP18.6■□□□□ 0.57
LINC01088-201ENST00000437737 ANKRD36CQ5JPF3 1778 aa18.6■□□□□ 0.57
LINC01088-201ENST00000437737 H7C1D1 291 aa18.59■□□□□ 0.57
LINC01088-201ENST00000437737 PPP2R1AP30153 589 aa18.59■□□□□ 0.57
LINC01088-201ENST00000437737 KIAA2012Q0VF49 1180 aa18.59■□□□□ 0.57
LINC01088-201ENST00000437737 USP48Q86UV5 1035 aa18.59■□□□□ 0.57
LINC01088-201ENST00000437737 CNOT7Q9UIV1 285 aaKnown RBP18.59■□□□□ 0.57
LINC01088-201ENST00000437737 PDE4DIPQ5VU43 2346 aa18.58■□□□□ 0.57
LINC01088-201ENST00000437737 BBOX1O75936 387 aa18.58■□□□□ 0.56
LINC01088-201ENST00000437737 SP8Q8IXZ3 490 aa18.58■□□□□ 0.56
LINC01088-201ENST00000437737 AKAP11Q9UKA4 1901 aa18.57■□□□□ 0.56
LINC01088-201ENST00000437737 ERBB4Q15303 1308 aa18.57■□□□□ 0.56
LINC01088-201ENST00000437737 SHTN1A0MZ66 631 aa18.57■□□□□ 0.56
LINC01088-201ENST00000437737 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
LINC01088-201ENST00000437737 SOX10P56693 466 aa18.57■□□□□ 0.56
LINC01088-201ENST00000437737 SLC10A5Q5PT55 438 aa18.57■□□□□ 0.56
LINC01088-201ENST00000437737 MICALL2Q8IY33 904 aa18.57■□□□□ 0.56
LINC01088-201ENST00000437737 POLR2AP24928 1970 aaKnown RBP18.57■□□□□ 0.56
LINC01088-201ENST00000437737 TAF1P21675 1872 aa18.56■□□□□ 0.56
LINC01088-201ENST00000437737 RGMBQ6NW40 437 aa18.56■□□□□ 0.56
LINC01088-201ENST00000437737 THUMPD2Q9BTF0 503 aaKnown RBP18.56■□□□□ 0.56
LINC01088-201ENST00000437737 TNRC18O15417 2968 aaPredicted RBP18.56■□□□□ 0.56
LINC01088-201ENST00000437737 YDJCA8MPS7 323 aa18.55■□□□□ 0.56
LINC01088-201ENST00000437737 DLK2Q6UY11 383 aa18.55■□□□□ 0.56
LINC01088-201ENST00000437737 DDX46Q7L014 1031 aaKnown RBP18.55■□□□□ 0.56
LINC01088-201ENST00000437737 SAMD7Q7Z3H4 446 aa18.54■□□□□ 0.56
LINC01088-201ENST00000437737 KRT26Q7Z3Y9 468 aa18.54■□□□□ 0.56
LINC01088-201ENST00000437737 C2orf69Q8N8R5 385 aa18.54■□□□□ 0.56
LINC01088-201ENST00000437737 GBA2Q9HCG7 927 aaPredicted RBP18.54■□□□□ 0.56
LINC01088-201ENST00000437737 SAGE1Q9NXZ1 904 aa18.54■□□□□ 0.56
LINC01088-201ENST00000437737 ZBTB12Q9Y330 459 aaPredicted RBP18.54■□□□□ 0.56
LINC01088-201ENST00000437737 HCLS1P14317 486 aaPredicted RBP18.53■□□□□ 0.56
LINC01088-201ENST00000437737 EIF2S2P20042 333 aaKnown RBP18.53■□□□□ 0.56
LINC01088-201ENST00000437737 KIF23Q02241 960 aaPredicted RBP18.53■□□□□ 0.56
LINC01088-201ENST00000437737 GRAPQ13588 217 aa18.53■□□□□ 0.56
LINC01088-201ENST00000437737 GRAPLQ8TC17 118 aaPredicted RBP18.53■□□□□ 0.56
LINC01088-201ENST00000437737 CCDC102AQ96A19 550 aa18.53■□□□□ 0.56
LINC01088-201ENST00000437737 DUOX1Q9NRD9 1551 aa18.53■□□□□ 0.56
LINC01088-201ENST00000437737 LRRC37AA6NMS7 1700 aa18.52■□□□□ 0.56
LINC01088-201ENST00000437737 FAM155AB1AL88 458 aaPredicted RBP18.52■□□□□ 0.56
LINC01088-201ENST00000437737 TRPA1O75762 1119 aa18.52■□□□□ 0.56
LINC01088-201ENST00000437737 ZNF157P51786 506 aaPredicted RBP18.52■□□□□ 0.56
LINC01088-201ENST00000437737 TBC1D10BQ4KMP7 808 aaPredicted RBP18.52■□□□□ 0.56
LINC01088-201ENST00000437737 HSP90AB3PQ58FF7 597 aa18.52■□□□□ 0.56
LINC01088-201ENST00000437737 DCPSQ96C86 337 aaKnown RBP18.52■□□□□ 0.56
LINC01088-201ENST00000437737 ADM5C9JUS6 153 aa18.51■□□□□ 0.55
LINC01088-201ENST00000437737 PSMD14O00487 310 aa18.51■□□□□ 0.55
LINC01088-201ENST00000437737 RBM26Q5T8P6 1007 aaKnown RBP18.51■□□□□ 0.55
LINC01088-201ENST00000437737 DPF2Q92785 391 aa18.51■□□□□ 0.55
LINC01088-201ENST00000437737 RNF186Q9NXI6 227 aa18.51■□□□□ 0.55
LINC01088-201ENST00000437737 TRMT112Q9UI30 125 aaKnown RBP18.51■□□□□ 0.55
LINC01088-201ENST00000437737 DDX60Q8IY21 1712 aaKnown RBP18.5■□□□□ 0.55
LINC01088-201ENST00000437737 ANXA1P04083 346 aa18.5■□□□□ 0.55
LINC01088-201ENST00000437737 NFE2L2Q16236 605 aa18.5■□□□□ 0.55
LINC01088-201ENST00000437737 WASHC4Q2M389 1173 aa18.5■□□□□ 0.55
LINC01088-201ENST00000437737 TMC4Q7Z404 712 aa18.5■□□□□ 0.55
LINC01088-201ENST00000437737 LRP10Q7Z4F1 713 aa18.5■□□□□ 0.55
LINC01088-201ENST00000437737 NLRP10Q86W26 655 aa18.5■□□□□ 0.55
LINC01088-201ENST00000437737 DBNDD1Q9H9R9 158 aa18.5■□□□□ 0.55
LINC01088-201ENST00000437737 TSPYL4Q9UJ04 414 aa18.5■□□□□ 0.55
LINC01088-201ENST00000437737 SH3TC1Q8TE82 1336 aa18.49■□□□□ 0.55
LINC01088-201ENST00000437737 AIMP1Q12904 312 aaKnown RBP18.49■□□□□ 0.55
LINC01088-201ENST00000437737 PDIA6Q15084 440 aa18.49■□□□□ 0.55
LINC01088-201ENST00000437737 PROSER3Q2NL68 480 aa18.49■□□□□ 0.55
LINC01088-201ENST00000437737 RIMBP2O15034 1052 aa18.48■□□□□ 0.55
LINC01088-201ENST00000437737 EGFRP00533 1210 aa18.48■□□□□ 0.55
LINC01088-201ENST00000437737 NSFL1CQ9UNZ2 370 aaKnown RBP18.48■□□□□ 0.55
LINC01088-201ENST00000437737 MAPK8IP3Q9UPT6 1336 aa18.48■□□□□ 0.55
LINC01088-201ENST00000437737 SLC10A3P09131 477 aa18.47■□□□□ 0.55
LINC01088-201ENST00000437737 RPS12P25398 132 aaKnown RBP18.47■□□□□ 0.55
LINC01088-201ENST00000437737 PRPF38BQ5VTL8 546 aaKnown RBP18.47■□□□□ 0.55
LINC01088-201ENST00000437737 COPS6Q7L5N1 327 aa18.47■□□□□ 0.55
LINC01088-201ENST00000437737 CTU1Q7Z7A3 348 aaKnown RBP18.47■□□□□ 0.55
LINC01088-201ENST00000437737 C6orf229H3BNL8 230 aa18.46■□□□□ 0.55
LINC01088-201ENST00000437737 KIF4BQ2VIQ3 1234 aa18.46■□□□□ 0.55
LINC01088-201ENST00000437737 SULF1Q8IWU6 871 aa18.46■□□□□ 0.55
LINC01088-201ENST00000437737 XAGE3Q8WTP9 111 aa18.46■□□□□ 0.55
LINC01088-201ENST00000437737 NECTIN2Q92692 538 aa18.46■□□□□ 0.55
LINC01088-201ENST00000437737 ZNF428Q96B54 188 aa18.46■□□□□ 0.55
LINC01088-201ENST00000437737 PLEKHF1Q96S99 279 aa18.46■□□□□ 0.55
LINC01088-201ENST00000437737 ECE2O60344 883 aa18.45■□□□□ 0.54
LINC01088-201ENST00000437737 TCIRG1Q13488 830 aa18.45■□□□□ 0.54
LINC01088-201ENST00000437737 CSRNP1Q96S65 589 aa18.45■□□□□ 0.54
LINC01088-201ENST00000437737 EYA3Q99504 573 aa18.45■□□□□ 0.54
LINC01088-201ENST00000437737 GGA3Q9NZ52 723 aa18.45■□□□□ 0.54
LINC01088-201ENST00000437737 DOK7Q18PE1 504 aa18.44■□□□□ 0.54
LINC01088-201ENST00000437737 RTL9Q8NET4 1388 aa18.43■□□□□ 0.54
LINC01088-201ENST00000437737 REM2Q8IYK8 340 aaPredicted RBP18.43■□□□□ 0.54
LINC01088-201ENST00000437737 CELF1Q92879 486 aaKnown RBP18.43■□□□□ 0.54
LINC01088-201ENST00000437737 CDCA5Q96FF9 252 aa18.43■□□□□ 0.54
LINC01088-201ENST00000437737 PNNQ9H307 717 aaKnown RBP18.43■□□□□ 0.54
LINC01088-201ENST00000437737 KCNQ5Q9NR82 932 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms