RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 ZIC5Q96T25 663 aa19.95■□□□□ 0.78
NELFE-204ENST00000436289 FAM155AB1AL88 458 aaPredicted RBP19.94■□□□□ 0.78
NELFE-204ENST00000436289 NTSR2O95665 410 aa19.94■□□□□ 0.78
NELFE-204ENST00000436289 KIF23Q02241 960 aaPredicted RBP19.94■□□□□ 0.78
NELFE-204ENST00000436289 GBA2Q9HCG7 927 aaPredicted RBP19.94■□□□□ 0.78
NELFE-204ENST00000436289 RNF186Q9NXI6 227 aa19.94■□□□□ 0.78
NELFE-204ENST00000436289 UBN2Q6ZU65 1347 aa19.94■□□□□ 0.78
NELFE-204ENST00000436289 TRPA1O75762 1119 aa19.93■□□□□ 0.78
NELFE-204ENST00000436289 RAD17O75943 681 aa19.93■□□□□ 0.78
NELFE-204ENST00000436289 TMC4Q7Z404 712 aa19.93■□□□□ 0.78
NELFE-204ENST00000436289 GCC1Q96CN9 775 aa19.93■□□□□ 0.78
NELFE-204ENST00000436289 RRP7AQ9Y3A4 280 aaKnown RBP19.93■□□□□ 0.78
NELFE-204ENST00000436289 ZNF157P51786 506 aaPredicted RBP19.92■□□□□ 0.78
NELFE-204ENST00000436289 TTLL7Q6ZT98 887 aa19.92■□□□□ 0.78
NELFE-204ENST00000436289 KRT26Q7Z3Y9 468 aa19.92■□□□□ 0.78
NELFE-204ENST00000436289 TRPM4Q8TD43 1214 aa19.92■□□□□ 0.78
NELFE-204ENST00000436289 UTP14AQ9BVJ6 771 aaKnown RBP19.92■□□□□ 0.78
NELFE-204ENST00000436289 ERBB4Q15303 1308 aa19.92■□□□□ 0.78
NELFE-204ENST00000436289 NUP98P52948 1817 aa19.92■□□□□ 0.78
NELFE-204ENST00000436289 U2AF1L5P0DN76 240 aaPredicted RBP19.91■□□□□ 0.78
NELFE-204ENST00000436289 U2AF1Q01081 240 aaKnown RBP eCLIP19.91■□□□□ 0.78
NELFE-204ENST00000436289 MICALL2Q8IY33 904 aa19.91■□□□□ 0.78
NELFE-204ENST00000436289 DCPSQ96C86 337 aaKnown RBP19.91■□□□□ 0.78
NELFE-204ENST00000436289 ZBTB3Q9H5J0 574 aa19.91■□□□□ 0.78
NELFE-204ENST00000436289 RPS12P25398 132 aaKnown RBP19.9■□□□□ 0.78
NELFE-204ENST00000436289 ABCC4O15439 1325 aa19.9■□□□□ 0.78
NELFE-204ENST00000436289 DCTN1Q14203 1278 aa19.89■□□□□ 0.77
NELFE-204ENST00000436289 C3orf67Q6ZVT6 689 aa19.89■□□□□ 0.77
NELFE-204ENST00000436289 DDX46Q7L014 1031 aaKnown RBP19.89■□□□□ 0.77
NELFE-204ENST00000436289 MYL6BP14649 208 aa19.88■□□□□ 0.77
NELFE-204ENST00000436289 CSRNP1Q96S65 589 aa19.88■□□□□ 0.77
NELFE-204ENST00000436289 NEFMP07197 916 aa19.87■□□□□ 0.77
NELFE-204ENST00000436289 SLC10A3P09131 477 aa19.87■□□□□ 0.77
NELFE-204ENST00000436289 EIF4A1P60842 406 aaKnown RBP19.87■□□□□ 0.77
NELFE-204ENST00000436289 MIS18AQ9NYP9 233 aa19.87■□□□□ 0.77
NELFE-204ENST00000436289 YDJCA8MPS7 323 aa19.86■□□□□ 0.77
NELFE-204ENST00000436289 GRAPQ13588 217 aa19.86■□□□□ 0.77
NELFE-204ENST00000436289 HSP90AB3PQ58FF7 597 aa19.86■□□□□ 0.77
NELFE-204ENST00000436289 SAMD7Q7Z3H4 446 aa19.86■□□□□ 0.77
NELFE-204ENST00000436289 GRAPLQ8TC17 118 aaPredicted RBP19.86■□□□□ 0.77
NELFE-204ENST00000436289 HPS5Q9UPZ3 1129 aa19.86■□□□□ 0.77
NELFE-204ENST00000436289 WASHC4Q2M389 1173 aa19.85■□□□□ 0.77
NELFE-204ENST00000436289 SLC51AQ86UW1 340 aa19.85■□□□□ 0.77
NELFE-204ENST00000436289 SULF1Q8IWU6 871 aa19.85■□□□□ 0.77
NELFE-204ENST00000436289 LAMB4A4D0S4 1761 aa19.85■□□□□ 0.77
NELFE-204ENST00000436289 AKAP11Q9UKA4 1901 aa19.84■□□□□ 0.77
NELFE-204ENST00000436289 FKBP1BP68106 108 aa19.84■□□□□ 0.77
NELFE-204ENST00000436289 ZBTB12Q9Y330 459 aaPredicted RBP19.84■□□□□ 0.77
NELFE-204ENST00000436289 PSMD14O00487 310 aa19.83■□□□□ 0.77
NELFE-204ENST00000436289 TBC1D10BQ4KMP7 808 aaPredicted RBP19.83■□□□□ 0.77
NELFE-204ENST00000436289 HDAC9Q9UKV0 1011 aa19.83■□□□□ 0.77
NELFE-204ENST00000436289 SHTN1A0MZ66 631 aa19.82■□□□□ 0.76
NELFE-204ENST00000436289 NOM1Q5C9Z4 860 aaKnown RBP19.82■□□□□ 0.76
NELFE-204ENST00000436289 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
NELFE-204ENST00000436289 NECTIN2Q92692 538 aa19.81■□□□□ 0.76
NELFE-204ENST00000436289 EYA3Q99504 573 aa19.81■□□□□ 0.76
NELFE-204ENST00000436289 SH3TC1Q8TE82 1336 aa19.8■□□□□ 0.76
NELFE-204ENST00000436289 ADM5C9JUS6 153 aa19.8■□□□□ 0.76
NELFE-204ENST00000436289 CNGB1Q14028 1251 aaPredicted RBP19.8■□□□□ 0.76
NELFE-204ENST00000436289 RBM26Q5T8P6 1007 aaKnown RBP19.8■□□□□ 0.76
NELFE-204ENST00000436289 DLK2Q6UY11 383 aa19.8■□□□□ 0.76
NELFE-204ENST00000436289 KIF4BQ2VIQ3 1234 aa19.79■□□□□ 0.76
NELFE-204ENST00000436289 TRMT112Q9UI30 125 aaKnown RBP19.79■□□□□ 0.76
NELFE-204ENST00000436289 NSFL1CQ9UNZ2 370 aaKnown RBP19.79■□□□□ 0.76
NELFE-204ENST00000436289 HCLS1P14317 486 aaPredicted RBP19.78■□□□□ 0.76
NELFE-204ENST00000436289 NLRP10Q86W26 655 aa19.78■□□□□ 0.76
NELFE-204ENST00000436289 EGFRP00533 1210 aa19.77■□□□□ 0.76
NELFE-204ENST00000436289 FBXO46Q6PJ61 603 aaPredicted RBP19.77■□□□□ 0.76
NELFE-204ENST00000436289 LRP10Q7Z4F1 713 aa19.77■□□□□ 0.76
NELFE-204ENST00000436289 RASAL3Q86YV0 1011 aa19.77■□□□□ 0.76
NELFE-204ENST00000436289 CDCA5Q96FF9 252 aa19.77■□□□□ 0.76
NELFE-204ENST00000436289 DBNDD1Q9H9R9 158 aa19.77■□□□□ 0.76
NELFE-204ENST00000436289 POLR2AP24928 1970 aaKnown RBP19.77■□□□□ 0.75
NELFE-204ENST00000436289 ANKRD36CQ5JPF3 1778 aa19.76■□□□□ 0.75
NELFE-204ENST00000436289 C6orf229H3BNL8 230 aa19.76■□□□□ 0.75
NELFE-204ENST00000436289 VIL1P09327 827 aaKnown RBP19.76■□□□□ 0.75
NELFE-204ENST00000436289 TCIRG1Q13488 830 aa19.76■□□□□ 0.75
NELFE-204ENST00000436289 ZNF296Q8WUU4 475 aaPredicted RBP19.76■□□□□ 0.75
NELFE-204ENST00000436289 GGA3Q9NZ52 723 aa19.76■□□□□ 0.75
NELFE-204ENST00000436289 ECE2O60344 883 aa19.75■□□□□ 0.75
NELFE-204ENST00000436289 PDIA6Q15084 440 aa19.75■□□□□ 0.75
NELFE-204ENST00000436289 ZC3H12CQ9C0D7 883 aaKnown RBP19.75■□□□□ 0.75
NELFE-204ENST00000436289 PNNQ9H307 717 aaKnown RBP19.75■□□□□ 0.75
NELFE-204ENST00000436289 RIMBP2O15034 1052 aa19.74■□□□□ 0.75
NELFE-204ENST00000436289 TM4SF4P48230 202 aa19.74■□□□□ 0.75
NELFE-204ENST00000436289 SF3B3Q15393 1217 aaKnown RBP19.74■□□□□ 0.75
NELFE-204ENST00000436289 BABAM1Q9NWV8 329 aa19.74■□□□□ 0.75
NELFE-204ENST00000436289 KDM3BQ7LBC6 1761 aa19.73■□□□□ 0.75
NELFE-204ENST00000436289 GPR25O00155 361 aa19.73■□□□□ 0.75
NELFE-204ENST00000436289 PPP2R1AP30153 589 aa19.73■□□□□ 0.75
NELFE-204ENST00000436289 ZNF280AP59817 542 aaPredicted RBP19.73■□□□□ 0.75
NELFE-204ENST00000436289 HABP4Q5JVS0 413 aaKnown RBP19.73■□□□□ 0.75
NELFE-204ENST00000436289 AGBL3Q8NEM8 1001 aa19.73■□□□□ 0.75
NELFE-204ENST00000436289 POLLQ9UGP5 575 aa19.73■□□□□ 0.75
NELFE-204ENST00000436289 PITPNM2Q9BZ72 1349 aa19.73■□□□□ 0.75
NELFE-204ENST00000436289 G3V3G9 751 aa19.72■□□□□ 0.75
NELFE-204ENST00000436289 EIF2S2P20042 333 aaKnown RBP19.72■□□□□ 0.75
NELFE-204ENST00000436289 DCAF8Q5TAQ9 597 aa19.72■□□□□ 0.75
NELFE-204ENST00000436289 INTS3Q68E01 1043 aaKnown RBP19.72■□□□□ 0.75
NELFE-204ENST00000436289 COPS6Q7L5N1 327 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms