RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FMN2Q9NZ56 1722 aa18.6■□□□□ 0.57
SCARF1-203ENST00000434376 CCDC171Q6TFL3 1326 aa18.59■□□□□ 0.57
SCARF1-203ENST00000434376 PDCL3Q9H2J4 239 aa18.59■□□□□ 0.57
SCARF1-203ENST00000434376 RGPD1P0DJD0 1748 aa18.59■□□□□ 0.57
SCARF1-203ENST00000434376 LARP1BQ659C4 914 aaKnown RBP18.59■□□□□ 0.57
SCARF1-203ENST00000434376 IQSEC3Q9UPP2 1182 aaPredicted RBP18.59■□□□□ 0.57
SCARF1-203ENST00000434376 UQCRHLA0A096LP55 91 aa18.58■□□□□ 0.57
SCARF1-203ENST00000434376 UQCRHP07919 91 aa18.58■□□□□ 0.57
SCARF1-203ENST00000434376 TTLL5Q6EMB2 1281 aa18.58■□□□□ 0.57
SCARF1-203ENST00000434376 BCL11BQ9C0K0 894 aaPredicted RBP18.58■□□□□ 0.57
SCARF1-203ENST00000434376 CWC25Q9NXE8 425 aaPredicted RBP18.58■□□□□ 0.57
SCARF1-203ENST00000434376 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.57
SCARF1-203ENST00000434376 NFAT5O94916 1531 aa18.58■□□□□ 0.56
SCARF1-203ENST00000434376 XRN1Q8IZH2 1706 aaKnown RBP18.58■□□□□ 0.56
SCARF1-203ENST00000434376 TPCN1Q9ULQ1 816 aa18.58■□□□□ 0.56
SCARF1-203ENST00000434376 JAK2O60674 1132 aa18.57■□□□□ 0.56
SCARF1-203ENST00000434376 HDAC5Q9UQL6 1122 aa18.57■□□□□ 0.56
SCARF1-203ENST00000434376 SLC27A2O14975 620 aa18.57■□□□□ 0.56
SCARF1-203ENST00000434376 STX6O43752 255 aa18.57■□□□□ 0.56
SCARF1-203ENST00000434376 PTMSP20962 102 aa18.57■□□□□ 0.56
SCARF1-203ENST00000434376 ADORA1P30542 326 aa18.57■□□□□ 0.56
SCARF1-203ENST00000434376 CCDC57Q2TAC2 916 aa18.57■□□□□ 0.56
SCARF1-203ENST00000434376 CCDC24Q8N4L8 307 aa18.57■□□□□ 0.56
SCARF1-203ENST00000434376 SRCAPQ6ZRS2 3230 aa18.56■□□□□ 0.56
SCARF1-203ENST00000434376 APPP05067 770 aa18.56■□□□□ 0.56
SCARF1-203ENST00000434376 FAM182BQ5T319 152 aa18.56■□□□□ 0.56
SCARF1-203ENST00000434376 GIMAP6Q6P9H5 292 aa18.56■□□□□ 0.56
SCARF1-203ENST00000434376 BICDL1Q6ZP65 573 aa18.56■□□□□ 0.56
SCARF1-203ENST00000434376 BRF1Q92994 677 aa18.56■□□□□ 0.56
SCARF1-203ENST00000434376 NCOA5Q9HCD5 579 aaKnown RBP18.56■□□□□ 0.56
SCARF1-203ENST00000434376 TTC41PQ6P2S7 1318 aa18.55■□□□□ 0.56
SCARF1-203ENST00000434376 BRD1O95696 1058 aa18.55■□□□□ 0.56
SCARF1-203ENST00000434376 IFIT1P09914 478 aaKnown RBP18.55■□□□□ 0.56
SCARF1-203ENST00000434376 ZNF830Q96NB3 372 aaPredicted RBP18.55■□□□□ 0.56
SCARF1-203ENST00000434376 MCM2P49736 904 aa18.55■□□□□ 0.56
SCARF1-203ENST00000434376 HLFQ16534 295 aa18.55■□□□□ 0.56
SCARF1-203ENST00000434376 GPHNQ9NQX3 736 aaPredicted RBP18.55■□□□□ 0.56
SCARF1-203ENST00000434376 OFD1O75665 1012 aa18.54■□□□□ 0.56
SCARF1-203ENST00000434376 PLBD2Q8NHP8 589 aa18.54■□□□□ 0.56
SCARF1-203ENST00000434376 A0A1B0GUL7 405 aa18.54■□□□□ 0.56
SCARF1-203ENST00000434376 GOLGA6L4A6NEF3 574 aa18.54■□□□□ 0.56
SCARF1-203ENST00000434376 PIGBQ92521 554 aa18.54■□□□□ 0.56
SCARF1-203ENST00000434376 CEP126Q9P2H0 1117 aa18.54■□□□□ 0.56
SCARF1-203ENST00000434376 WDR33Q9C0J8 1336 aaKnown RBP18.53■□□□□ 0.56
SCARF1-203ENST00000434376 CYP2E1P05181 493 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-203ENST00000434376 HCLS1P14317 486 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-203ENST00000434376 CNNM1Q9NRU3 951 aa18.53■□□□□ 0.56
SCARF1-203ENST00000434376 ANAPC15P60006 121 aa18.53■□□□□ 0.56
SCARF1-203ENST00000434376 CDC37L1Q7L3B6 337 aa18.52■□□□□ 0.56
SCARF1-203ENST00000434376 TOMM22Q9NS69 142 aa18.52■□□□□ 0.56
SCARF1-203ENST00000434376 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.52■□□□□ 0.56
SCARF1-203ENST00000434376 MST1RQ04912 1400 aa18.52■□□□□ 0.56
SCARF1-203ENST00000434376 IDH1O75874 414 aaKnown RBP18.52■□□□□ 0.56
SCARF1-203ENST00000434376 CKAP2LQ8IYA6 745 aa18.52■□□□□ 0.56
SCARF1-203ENST00000434376 TRMT112Q9UI30 125 aaKnown RBP18.52■□□□□ 0.55
SCARF1-203ENST00000434376 RXRAP19793 462 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 RNF20Q5VTR2 975 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 WDR17Q8IZU2 1322 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 A0A087WWV3 80 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 H3BQV1 296 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 ZSCAN22P10073 491 aaPredicted RBP18.51■□□□□ 0.55
SCARF1-203ENST00000434376 MTX1Q13505 466 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 TTC39AQ5SRH9 613 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 IFFO2Q5TF58 517 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 OTUD7BQ6GQQ9 843 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 Q6ZUG5 572 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 APOBRQ0VD83 1088 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 LDHAL6AQ6ZMR3 332 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 KIF6Q6ZMV9 814 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 CCDC144CPQ8IYA2 1237 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 TSC1Q92574 1164 aa18.51■□□□□ 0.55
SCARF1-203ENST00000434376 PPP1R9BQ96SB3 815 aa18.5■□□□□ 0.55
SCARF1-203ENST00000434376 ZBTB1Q9Y2K1 713 aa18.5■□□□□ 0.55
SCARF1-203ENST00000434376 RGPD5Q99666 1765 aa18.5■□□□□ 0.55
SCARF1-203ENST00000434376 PCDH11XQ9BZA7 1347 aa18.5■□□□□ 0.55
SCARF1-203ENST00000434376 PCDH11YQ9BZA8 1340 aa18.5■□□□□ 0.55
SCARF1-203ENST00000434376 FAM184AQ8NB25 1140 aa18.5■□□□□ 0.55
SCARF1-203ENST00000434376 TAF5LO75529 589 aa18.49■□□□□ 0.55
SCARF1-203ENST00000434376 CUL4AQ13619 759 aa18.49■□□□□ 0.55
SCARF1-203ENST00000434376 SCARF1Q14162 830 aa18.49■□□□□ 0.55
SCARF1-203ENST00000434376 FTOQ9C0B1 505 aaKnown RBP eCLIP18.49■□□□□ 0.55
SCARF1-203ENST00000434376 USP25Q9UHP3 1055 aa18.49■□□□□ 0.55
SCARF1-203ENST00000434376 NECTIN1Q15223 517 aa18.49■□□□□ 0.55
SCARF1-203ENST00000434376 ERCC4Q92889 916 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-203ENST00000434376 PAG1Q9NWQ8 432 aa18.49■□□□□ 0.55
SCARF1-203ENST00000434376 CHD2O14647 1828 aaKnown RBP18.49■□□□□ 0.55
SCARF1-203ENST00000434376 TTC14Q96N46 770 aa18.49■□□□□ 0.55
SCARF1-203ENST00000434376 CYP21A2P08686 494 aa18.48■□□□□ 0.55
SCARF1-203ENST00000434376 CCDC82Q8N4S0 544 aa18.48■□□□□ 0.55
SCARF1-203ENST00000434376 SLC4A8Q2Y0W8 1093 aa18.48■□□□□ 0.55
SCARF1-203ENST00000434376 F13A1P00488 732 aa18.48■□□□□ 0.55
SCARF1-203ENST00000434376 RFX5P48382 616 aaPredicted RBP18.48■□□□□ 0.55
SCARF1-203ENST00000434376 SPC24Q8NBT2 197 aa18.48■□□□□ 0.55
SCARF1-203ENST00000434376 NEK1Q96PY6 1258 aa18.48■□□□□ 0.55
SCARF1-203ENST00000434376 GJB4Q9NTQ9 266 aa18.48■□□□□ 0.55
SCARF1-203ENST00000434376 MAP4K1Q92918 833 aa18.47■□□□□ 0.55
SCARF1-203ENST00000434376 FOXO4P98177 505 aa18.47■□□□□ 0.55
SCARF1-203ENST00000434376 IFIT5Q13325 482 aaKnown RBP18.47■□□□□ 0.55
SCARF1-203ENST00000434376 GREM2Q9H772 168 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms