RNA–Protein interactions for RNA: ENST00000431329.5

GAPVD1-208, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-208ENST00000431329 EVI5LQ96CN4 794 aa8.39□□□□□ -1.07
GAPVD1-208ENST00000431329 PUS3Q9BZE2 481 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-208ENST00000431329 FPGT-TNNI3KV9GXZ4 949 aa8.39□□□□□ -1.07
GAPVD1-208ENST00000431329 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-208ENST00000431329 ITGB4P16144 1822 aa8.39□□□□□ -1.07
GAPVD1-208ENST00000431329 ERVV-2B6SEH9 535 aa8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 GPTP24298 496 aa8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 TIMM10P62072 90 aa8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 RUFY3Q7L099 469 aa8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 TRIM44Q96DX7 344 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 CWC25Q9NXE8 425 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 HDAC5Q9UQL6 1122 aa8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 RBM8AQ9Y5S9 174 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 ANAPC15P60006 121 aa8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 FAM89AQ96GI7 184 aa8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 CCDC171Q6TFL3 1326 aa8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 ROBO1Q9Y6N7 1651 aa8.38□□□□□ -1.07
GAPVD1-208ENST00000431329 ESPNB1AK53 854 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 CLCN1P35523 988 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 NASPP49321 788 aaPredicted RBP8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 COPRSQ9NQ92 184 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 COL15A1P39059 1388 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 ZSCAN23Q3MJ62 389 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 RABL6Q3YEC7 729 aaPredicted RBP8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 CCDC83Q8IWF9 413 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 NECAB1Q8N987 351 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 GPT2Q8TD30 523 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 RUFY2Q8WXA3 655 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 ACSBG1Q96GR2 724 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 ATG3Q9NT62 314 aa8.37□□□□□ -1.07
GAPVD1-208ENST00000431329 NUTM2BA6NNL0 878 aaPredicted RBP8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 FAM177BA6PVY3 158 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 NUTM2EB1AL46 878 aaPredicted RBP8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 H7C1W4 665 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 ZBTB22O15209 634 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 CUL4AQ13619 759 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 NKX1-1Q15270 411 aaPredicted RBP8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 HLFQ16534 295 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 CREB3L3Q68CJ9 461 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 ATG9AQ7Z3C6 839 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 NUTM2AQ8IVF1 878 aaPredicted RBP8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 TTC14Q96N46 770 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 SLC4A9Q96Q91 983 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 GOLIM4O00461 696 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 HSP90AB3PQ58FF7 597 aa8.36□□□□□ -1.07
GAPVD1-208ENST00000431329 ZNF609O15014 1411 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 TNS2Q63HR2 1409 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 RPAP1Q9BWH6 1393 aaPredicted RBP8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 A0A0G2JLW4 131 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 SLC27A2O14975 620 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 PRIM1P49642 420 aaKnown RBP8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 STK3Q13188 491 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 NAP1L5Q96NT1 182 aaPredicted RBP8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 SNRKQ9NRH2 765 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 PDRG1Q9NUG6 133 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 MCM2P49736 904 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 ZNF445P59923 1031 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 NECTIN1Q15223 517 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 ZBTB1Q9Y2K1 713 aa8.35□□□□□ -1.07
GAPVD1-208ENST00000431329 COL16A1Q07092 1604 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 BRD1O95696 1058 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 ADORA1P30542 326 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 ST3GAL1Q11201 340 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 LRRC2Q9BYS8 371 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 RBSNQ9H1K0 784 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 TMEM63CQ9P1W3 806 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 TBC1D2BQ9UPU7 963 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 PPFIA3O75145 1194 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 GADD45BO75293 160 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 ATP5JP18859 108 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 PIP4K2BP78356 416 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 ME3Q16798 604 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 VPS53Q5VIR6 699 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 PI16Q6UXB8 463 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 KIF6Q6ZMV9 814 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 LIMCH1Q9UPQ0 1083 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 CYP46A1Q9Y6A2 500 aa8.34□□□□□ -1.07
GAPVD1-208ENST00000431329 MED23Q9ULK4 1368 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 DOT1LQ8TEK3 1739 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 A0A1B0GUL7 405 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 SYCE3A1L190 88 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 CCDC173Q0VFZ6 552 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 CCDC191Q8NCU4 936 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 ANP32BQ92688 251 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 MAP4K1Q92918 833 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 TPCN1Q9ULQ1 816 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 HSP90B1P14625 803 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 ZKSCAN1P17029 563 aaPredicted RBP8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 GJB2P29033 226 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 FKBP4Q02790 459 aaKnown RBP eCLIP8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 TCIRG1Q13488 830 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 SMC3Q9UQE7 1217 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 CNPY2Q9Y2B0 182 aa8.33□□□□□ -1.08
GAPVD1-208ENST00000431329 VPS37CA5D8V6 355 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-208ENST00000431329 EYA2O00167 538 aa8.32□□□□□ -1.08
GAPVD1-208ENST00000431329 EXOC5O00471 708 aa8.32□□□□□ -1.08
GAPVD1-208ENST00000431329 TAF5LO75529 589 aa8.32□□□□□ -1.08
GAPVD1-208ENST00000431329 FOSBP53539 338 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms