RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 PDIA6Q15084 440 aa21.16■□□□□ 0.98
TTC28-202ENST00000431039 KRT24Q2M2I5 525 aa21.16■□□□□ 0.98
TTC28-202ENST00000431039 PARP10Q53GL7 1025 aa21.16■□□□□ 0.98
TTC28-202ENST00000431039 LRP10Q7Z4F1 713 aa21.16■□□□□ 0.98
TTC28-202ENST00000431039 NECTIN2Q92692 538 aa21.16■□□□□ 0.98
TTC28-202ENST00000431039 HOXB7P09629 217 aa21.15■□□□□ 0.98
TTC28-202ENST00000431039 LMOD1P29536 600 aaPredicted RBP21.15■□□□□ 0.98
TTC28-202ENST00000431039 NLRP3Q96P20 1036 aa21.15■□□□□ 0.98
TTC28-202ENST00000431039 UTP14AQ9BVJ6 771 aaKnown RBP21.15■□□□□ 0.98
TTC28-202ENST00000431039 ELL2O00472 640 aaPredicted RBP21.14■□□□□ 0.97
TTC28-202ENST00000431039 NIM1KQ8IY84 436 aa21.14■□□□□ 0.97
TTC28-202ENST00000431039 PPIP5K2O43314 1243 aa21.13■□□□□ 0.97
TTC28-202ENST00000431039 SCNN1DP51172 638 aa21.13■□□□□ 0.97
TTC28-202ENST00000431039 RARSP54136 660 aaKnown RBP21.13■□□□□ 0.97
TTC28-202ENST00000431039 GRIPAP1Q4V328 841 aa21.13■□□□□ 0.97
TTC28-202ENST00000431039 CHMP4AQ9BY43 222 aa21.13■□□□□ 0.97
TTC28-202ENST00000431039 ABCC4O15439 1325 aa21.12■□□□□ 0.97
TTC28-202ENST00000431039 EPS15P42566 896 aa21.12■□□□□ 0.97
TTC28-202ENST00000431039 AIMP1Q12904 312 aaKnown RBP21.12■□□□□ 0.97
TTC28-202ENST00000431039 AOC3Q16853 763 aa21.12■□□□□ 0.97
TTC28-202ENST00000431039 AIDAQ96BJ3 306 aa21.12■□□□□ 0.97
TTC28-202ENST00000431039 TMX4Q9H1E5 349 aaPredicted RBP21.12■□□□□ 0.97
TTC28-202ENST00000431039 ABT1Q9ULW3 272 aaKnown RBP21.12■□□□□ 0.97
TTC28-202ENST00000431039 ALDH1L2Q3SY69 923 aa21.11■□□□□ 0.97
TTC28-202ENST00000431039 XAGE3Q8WTP9 111 aa21.11■□□□□ 0.97
TTC28-202ENST00000431039 ATP6V0A2Q9Y487 856 aa21.11■□□□□ 0.97
TTC28-202ENST00000431039 FMR1Q06787 632 aaKnown RBP eCLIP21.1■□□□□ 0.97
TTC28-202ENST00000431039 DEFB115Q30KQ5 88 aa21.1■□□□□ 0.97
TTC28-202ENST00000431039 SLC10A5Q5PT55 438 aa21.1■□□□□ 0.97
TTC28-202ENST00000431039 COPS6Q7L5N1 327 aa21.1■□□□□ 0.97
TTC28-202ENST00000431039 DDX60Q8IY21 1712 aaKnown RBP21.09■□□□□ 0.97
TTC28-202ENST00000431039 RASSF10A6NK89 507 aa21.09■□□□□ 0.97
TTC28-202ENST00000431039 HCLS1P14317 486 aaPredicted RBP21.09■□□□□ 0.97
TTC28-202ENST00000431039 DDX21Q9NR30 783 aaKnown RBP eCLIP21.09■□□□□ 0.97
TTC28-202ENST00000431039 CTCFP49711 727 aaPredicted RBP21.08■□□□□ 0.97
TTC28-202ENST00000431039 HSP90AB3PQ58FF7 597 aa21.08■□□□□ 0.97
TTC28-202ENST00000431039 CCDC30Q5VVM6 783 aa21.08■□□□□ 0.97
TTC28-202ENST00000431039 NLRP10Q86W26 655 aa21.08■□□□□ 0.97
TTC28-202ENST00000431039 SSH1Q8WYL5 1049 aa21.08■□□□□ 0.97
TTC28-202ENST00000431039 BRPF1P55201 1214 aaPredicted RBP21.07■□□□□ 0.96
TTC28-202ENST00000431039 PRDM10Q9NQV6 1147 aa21.07■□□□□ 0.96
TTC28-202ENST00000431039 WBP1LQ9NX94 342 aa21.07■□□□□ 0.96
TTC28-202ENST00000431039 SUPT16HQ9Y5B9 1047 aaKnown RBP21.07■□□□□ 0.96
TTC28-202ENST00000431039 WDR33Q9C0J8 1336 aaKnown RBP21.06■□□□□ 0.96
TTC28-202ENST00000431039 TRAF5O00463 557 aa21.06■□□□□ 0.96
TTC28-202ENST00000431039 HDGFL1Q5TGJ6 251 aa21.06■□□□□ 0.96
TTC28-202ENST00000431039 DPP8Q6V1X1 898 aaPredicted RBP21.06■□□□□ 0.96
TTC28-202ENST00000431039 USP50Q70EL3 339 aaPredicted RBP21.06■□□□□ 0.96
TTC28-202ENST00000431039 SUPT20HQ8NEM7 779 aa21.06■□□□□ 0.96
TTC28-202ENST00000431039 TRMT112Q9UI30 125 aaKnown RBP21.06■□□□□ 0.96
TTC28-202ENST00000431039 BCAR3O75815 825 aa21.05■□□□□ 0.96
TTC28-202ENST00000431039 LBX1P52954 281 aa21.05■□□□□ 0.96
TTC28-202ENST00000431039 CXCL9Q07325 125 aa21.05■□□□□ 0.96
TTC28-202ENST00000431039 TCIRG1Q13488 830 aa21.05■□□□□ 0.96
TTC28-202ENST00000431039 PAXIP1Q6ZW49 1069 aaPredicted RBP21.05■□□□□ 0.96
TTC28-202ENST00000431039 SMC4Q9NTJ3 1288 aa21.05■□□□□ 0.96
TTC28-202ENST00000431039 ZNRF3Q9ULT6 936 aa21.05■□□□□ 0.96
TTC28-202ENST00000431039 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
TTC28-202ENST00000431039 THSD7BQ9C0I4 1608 aa21.04■□□□□ 0.96
TTC28-202ENST00000431039 LRRC37AA6NMS7 1700 aa21.04■□□□□ 0.96
TTC28-202ENST00000431039 BBOX1O75936 387 aa21.04■□□□□ 0.96
TTC28-202ENST00000431039 GRM1Q13255 1194 aa21.04■□□□□ 0.96
TTC28-202ENST00000431039 DDX46Q7L014 1031 aaKnown RBP21.04■□□□□ 0.96
TTC28-202ENST00000431039 SP8Q8IXZ3 490 aa21.04■□□□□ 0.96
TTC28-202ENST00000431039 MPNDQ8N594 471 aa21.04■□□□□ 0.96
TTC28-202ENST00000431039 MRPL50Q8N5N7 158 aaKnown RBP21.04■□□□□ 0.96
TTC28-202ENST00000431039 RTFDC1Q9BY42 306 aaPredicted RBP21.04■□□□□ 0.96
TTC28-202ENST00000431039 GPRC5DQ9NZD1 345 aa21.04■□□□□ 0.96
TTC28-202ENST00000431039 CHPF2Q9P2E5 772 aa21.04■□□□□ 0.96
TTC28-202ENST00000431039 DUOX1Q9NRD9 1551 aa21.03■□□□□ 0.96
TTC28-202ENST00000431039 GMPSP49915 693 aaPredicted RBP21.03■□□□□ 0.96
TTC28-202ENST00000431039 VPS33BQ9H267 617 aa21.03■□□□□ 0.96
TTC28-202ENST00000431039 ADARB2Q9NS39 739 aaKnown RBP21.03■□□□□ 0.96
TTC28-202ENST00000431039 GRAPQ13588 217 aa21.02■□□□□ 0.96
TTC28-202ENST00000431039 GRAPLQ8TC17 118 aaPredicted RBP21.02■□□□□ 0.96
TTC28-202ENST00000431039 BCL2L13Q9BXK5 485 aa21.02■□□□□ 0.96
TTC28-202ENST00000431039 STK31Q9BXU1 1019 aa21.02■□□□□ 0.96
TTC28-202ENST00000431039 RAD17O75943 681 aa21.01■□□□□ 0.95
TTC28-202ENST00000431039 HSPA8P11142 646 aaKnown RBP21.01■□□□□ 0.95
TTC28-202ENST00000431039 RRP1P56182 461 aaKnown RBP21.01■□□□□ 0.95
TTC28-202ENST00000431039 KIAA2012Q0VF49 1180 aa21.01■□□□□ 0.95
TTC28-202ENST00000431039 CST9Q5W186 159 aa21.01■□□□□ 0.95
TTC28-202ENST00000431039 CIAPIN1Q6FI81 312 aa21.01■□□□□ 0.95
TTC28-202ENST00000431039 CYP4F22Q6NT55 531 aa21.01■□□□□ 0.95
TTC28-202ENST00000431039 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.01■□□□□ 0.95
TTC28-202ENST00000431039 CAPNS2Q96L46 248 aa21.01■□□□□ 0.95
TTC28-202ENST00000431039 SLC4A2P04920 1241 aa21■□□□□ 0.95
TTC28-202ENST00000431039 MAP2K1Q02750 393 aaPredicted RBP21■□□□□ 0.95
TTC28-202ENST00000431039 DBF4Q9UBU7 674 aaPredicted RBP21■□□□□ 0.95
TTC28-202ENST00000431039 COL4A1P02462 1669 aa20.99■□□□□ 0.95
TTC28-202ENST00000431039 KIF16BQ96L93 1317 aa20.99■□□□□ 0.95
TTC28-202ENST00000431039 ATP5J2-PTCD1G3V325 749 aa20.98■□□□□ 0.95
TTC28-202ENST00000431039 IPO8O15397 1037 aaKnown RBP20.98■□□□□ 0.95
TTC28-202ENST00000431039 ECE1P42892 770 aa20.98■□□□□ 0.95
TTC28-202ENST00000431039 PLBD2Q8NHP8 589 aa20.98■□□□□ 0.95
TTC28-202ENST00000431039 GLIS2Q9BZE0 524 aaPredicted RBP20.98■□□□□ 0.95
TTC28-202ENST00000431039 POLR2AP24928 1970 aaKnown RBP20.97■□□□□ 0.95
TTC28-202ENST00000431039 SHTN1A0MZ66 631 aa20.97■□□□□ 0.95
TTC28-202ENST00000431039 YDJCA8MPS7 323 aa20.97■□□□□ 0.95
TTC28-202ENST00000431039 TNIP1Q15025 636 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms